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comparison orthologs/ucsb_hamster/lib/wisecfg/gon160.bla @ 0:5b9a38ec4a39 draft default tip

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author osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
date Tue, 11 Mar 2014 12:19:13 -0700
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comparison
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-1:000000000000 0:5b9a38ec4a39
1 # benner-gonnet matrix
2 # pam := 160
3 # print (DayhoffM (NewLogPAM1, pam));
4 # DayMatrix(Peptide, pam=160, Simil: max=15.808, min=-7.776, max offdiag=5.560,
5 # del=-21.255-1.396*(k-1))
6 A R N D C Q E G H I L K M F P S T W Y V *
7 4.6 -1.6 -1.2 -1.1 0.3 -0.7 -0.4 0.2 -1.8 -1.8 -2.2 -1.2 -1.2 -3.8 -0.1 1.6 0.5 -5.5 -3.7 0.1 -7.8
8 -1.6 7.1 -0.4 -1.6 -3.5 1.7 -0.3 -2.1 0.3 -4.1 -3.5 3.5 -2.9 -5.3 -2.1 -0.9 -0.9 -2.4 -2.9 -3.4 -7.8
9 -1.2 -0.4 6.5 2.6 -3.1 0.5 0.5 -0.2 1.5 -4.4 -4.8 0.8 -3.6 -4.7 -2.2 1.1 0.3 -5.5 -2.2 -3.8 -7.8
10 -1.1 -1.6 2.6 7.0 -5.3 0.6 3.4 -0.7 -0.1 -6.2 -6.5 -0.1 -5.0 -7.0 -1.9 0.0 -0.6 -7.8 -4.2 -4.9 -7.8
11 0.3 -3.5 -3.1 -5.3 13.5 -4.2 -5.2 -3.4 -2.3 -2.5 -2.9 -4.8 -1.9 -1.8 -5.2 -0.2 -1.4 -2.1 -1.3 -0.6 -7.8
12 -0.7 1.7 0.5 0.6 -4.2 5.6 2.3 -2.1 1.7 -3.2 -2.4 2.0 -1.2 -4.1 -0.8 -0.2 -0.4 -4.0 -2.9 -2.7 -7.8
13 -0.4 -0.3 0.5 3.4 -5.2 2.3 5.9 -2.1 -0.1 -4.3 -4.5 1.3 -3.1 -6.2 -1.4 -0.3 -0.8 -6.4 -4.4 -3.0 -7.8
14 0.2 -2.1 -0.2 -0.7 -3.4 -2.1 -2.1 8.2 -2.7 -7.0 -6.7 -2.4 -5.2 -7.6 -3.0 -0.1 -2.4 -5.5 -6.0 -5.2 -7.8
15 -1.8 0.3 1.5 -0.1 -2.3 1.7 -0.1 -2.7 9.3 -3.7 -3.2 0.2 -2.1 -0.7 -2.2 -0.8 -0.8 -1.9 2.7 -3.5 -7.8
16 -1.8 -4.1 -4.4 -6.2 -2.5 -3.2 -4.3 -7.0 -3.7 5.9 3.0 -3.5 2.9 0.3 -4.3 -3.3 -1.2 -3.4 -2.0 4.0 -7.8
17 -2.2 -3.5 -4.8 -6.5 -2.9 -2.4 -4.5 -6.7 -3.2 3.0 5.7 -3.4 3.4 1.9 -3.5 -3.6 -2.4 -2.0 -1.1 1.7 -7.8
18 -1.2 3.5 0.8 -0.1 -4.8 2.0 1.3 -2.4 0.2 -3.5 -3.4 5.5 -2.1 -5.3 -1.6 -0.4 -0.2 -5.4 -3.5 -3.0 -7.8
19 -1.2 -2.9 -3.6 -5.0 -1.9 -1.2 -3.1 -5.2 -2.1 2.9 3.4 -2.1 7.6 1.4 -4.2 -2.3 -1.1 -2.2 -1.3 1.4 -7.8
20 -3.8 -5.3 -4.7 -7.0 -1.8 -4.1 -6.2 -7.6 -0.7 0.3 1.9 -5.3 1.4 9.1 -5.8 -4.5 -3.6 3.2 5.6 -0.8 -7.8
21 -0.1 -2.1 -2.2 -1.9 -5.2 -0.8 -1.4 -3.0 -2.2 -4.3 -3.5 -1.6 -4.2 -5.8 9.6 0.0 -0.4 -7.4 -4.8 -3.2 -7.8
22 1.6 -0.9 1.1 0.0 -0.2 -0.2 -0.3 -0.1 -0.8 -3.3 -3.6 -0.4 -2.3 -4.5 0.0 4.4 2.3 -4.7 -2.8 -2.0 -7.8
23 0.5 -0.9 0.3 -0.6 -1.4 -0.4 -0.8 -2.4 -0.8 -1.2 -2.4 -0.2 -1.1 -3.6 -0.4 2.3 5.0 -5.4 -3.2 0.0 -7.8
24 -5.5 -2.4 -5.5 -7.8 -2.1 -4.0 -6.4 -5.5 -1.9 -3.4 -2.0 -5.4 -2.2 3.2 -7.4 -4.7 -5.4 15.8 3.8 -4.5 -7.8
25 -3.7 -2.9 -2.2 -4.2 -1.3 -2.9 -4.4 -6.0 2.7 -2.0 -1.1 -3.5 -1.3 5.6 -4.8 -2.8 -3.2 3.8 10.0 -2.4 -7.8
26 0.1 -3.4 -3.8 -4.9 -0.6 -2.7 -3.0 -5.2 -3.5 4.0 1.7 -3.0 1.4 -0.8 -3.2 -2.0 0.0 -4.5 -2.4 5.3 -7.8
27 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 -7.8 1