comparison phyloconversion/tnt2phytab.xml @ 0:5b9a38ec4a39 draft default tip

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author osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
date Tue, 11 Mar 2014 12:19:13 -0700
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1 <tool id="tnt2table" name="TNT2PHYTAB" version="1.0">
2 <description>Converts TNT text output from MorphoBank into PHYTAB format.</description>
3 <command interpreter="perl">tnt2phytab.pl $input &gt; out</command>
4 <inputs>
5 <param name="input" format="txt" type="data" label="Input file" />
6 </inputs>
7
8 <outputs>
9 <data from_work_dir="out" format="tabular" />
10 </outputs>
11 <help>
12 **What it does**
13
14 TNT2PHYTAB takes an input TNT text file generated in Morphobank and converts it to PHYTAB file format.
15
16 ------
17
18 **Inputs**
19
20 TNT text file generated in MorphoBank.
21
22 Link to MorphoBank: http://www.morphobank.org/
23
24 ------
25
26 **Outputs**
27
28 PHYTAB file format. Description: http://osiris-phylogenetics.blogspot.com/2012/09/introduction-to-phytab-format.html
29
30 ------
31
32 **Additional Information**
33
34 Please direct questions or comments to ucsb_phylogenetics@lifesci.ucsb.edu or, if you can, enter them on the
35 osiris_phylogenetics site at bitbucket.org
36
37 ------
38
39 **Citations**
40
41 This tool is part of the Osiris Phylogenetics Tool Package for Galaxy. If you make extensive use of this tool in a
42 publication, please consider citing the following.
43
44 Current Osiris Citation is here
45
46 http://osiris-phylogenetics.blogspot.com/2012/10/citation.html
47
48 Information about MorphoBank is here.
49
50 http://www.morphobank.org/index.php/About/Index
51 </help>
52
53 </tool>