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author osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
date Tue, 11 Mar 2014 12:19:13 -0700
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<<<<<<< /home/galaxy/galaxy-dist/tools/osiris/alignment/alignment.tool_conf
<section name="Osiris:Alignment" id="alignment">
=======
<section name="Osiris: Alignment" id="alignment">
>>>>>>> /tmp/alignment.tool_conf~other.3Q5xSY
  <label text="Alignment" id="phyloalign" />
        <tool file="osiris/alignment/phytab_muscle.xml" />
        <tool file="osiris/alignment/phytab_aliscorecut.xml"/>
        <tool file="osiris/alignment/phytab_mafft.xml" />
        <tool file="osiris/alignment/phytab_mview.xml" />
        <tool file="osiris/alignment/phytab_prank.xml" />
        <tool file="osiris/alignment/mview.xml" />
        <tool file="osiris/alignment/gblocks.xml" />
        <tool file="osiris/alignment/phytab_ssr.xml" />
        <tool file="osiris/alignment/gap-rem.xml" />
  <label text="Concatenation" id="concat" />
        <tool file="osiris/alignment/fasconcat.xml" />
        <tool file="osiris/alignment/phylocatenator.xml" />
        <tool file="osiris/alignment/fasta_concatenate_by_species.xml" />
  <label text="ModelTest" id="modeltest" />
        <tool file="osiris/alignment/jmodeltest.xml"/>
        <tool file="osiris/alignment/prottest.xml" />
 </section>