Mercurial > repos > ufz > checkv_build_database
annotate data_manager_conf.xml @ 0:4bd77968fe29 draft
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
author | ufz |
---|---|
date | Mon, 16 Sep 2024 09:53:52 +0000 |
parents | |
children | 7e80c69020f7 |
rev | line source |
---|---|
0
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
1 <data_managers> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
2 <data_manager tool_file="data_manager/checkv_datamanager.xml" id="checkv_build_database"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
3 <data_table name="checkv"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
4 <output> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
5 <column name="value"/> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
6 <column name="name"/> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
7 <column name="version"/> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
8 <column name="path" output_ref="out_file"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
9 <move type="directory"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
10 <source>${path}</source> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">checkv/${path}</target> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
12 </move> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/checkv/${path}</value_translation> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
14 <value_translation type="function">abspath</value_translation> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
15 </column> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
16 </output> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
17 </data_table> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
18 </data_manager> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
|
19 </data_managers> |