Mercurial > repos > ufz > checkv_build_database
annotate data_manager_conf.xml @ 2:88042a5ead89 draft
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit c78bd5eafa3d9450305cc8b32ba9cf8c64c42ba7
author | ufz |
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date | Mon, 18 Nov 2024 15:26:03 +0000 |
parents | 4bd77968fe29 |
children | 7e80c69020f7 |
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4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
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changeset
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1 <data_managers> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
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changeset
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2 <data_manager tool_file="data_manager/checkv_datamanager.xml" id="checkv_build_database"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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3 <data_table name="checkv"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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4 <output> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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5 <column name="value"/> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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6 <column name="name"/> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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7 <column name="version"/> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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8 <column name="path" output_ref="out_file"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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9 <move type="directory"> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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10 <source>${path}</source> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">checkv/${path}</target> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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12 </move> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/checkv/${path}</value_translation> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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14 <value_translation type="function">abspath</value_translation> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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15 </column> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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16 </output> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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17 </data_table> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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18 </data_manager> |
4bd77968fe29
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_checkv commit 625d1e8699c69e5ee3caef0cc5c883a9d9e6ac91
ufz
parents:
diff
changeset
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19 </data_managers> |