diff json_predict.py @ 0:8956e949d466 draft default tip

planemo upload for repository https://github.com/Helmholtz-UFZ/galaxy-tools/tree/main/tools/dfpl commit 66c6acfeff5441c36fba97787ddc5ee3d6a4a6ec
author ufz
date Thu, 19 Dec 2024 12:51:08 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/json_predict.py	Thu Dec 19 12:51:08 2024 +0000
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+import json
+from sys import stdin
+
+d = json.load(stdin)
+
+# The directory where the full model of the fnn is loaded from.
+d["fnnModelDir"] = ""  # 'dfpl predict' looks for "model_weights.h5" in this directory
+del d["fnn_weights"]
+
+d["compressFeatures"] = bool(d["compressFeatures"] == "true")
+
+# The encoder file where it is loaded from, to compress the fingerprints.
+d["ecModelDir"] = ""
+d["ecWeightsFile"] = "encoder_weights.h5"
+
+# Output csv file name which will contain one prediction per input line.
+# Default: prefix of input file name.
+d["outputFile"] = "predictions.csv"
+
+d["py/object"] = "dfpl.options.Options"
+
+print(json.dumps(d))