Mercurial > repos > ufz > genomad_build_database
annotate data_manager_conf.xml @ 1:03623fc64d5c draft
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit c78bd5eafa3d9450305cc8b32ba9cf8c64c42ba7
author | ufz |
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date | Mon, 18 Nov 2024 15:26:08 +0000 |
parents | c4ec3d81eeee |
children | 75abfb03b635 |
rev | line source |
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c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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1 <data_managers> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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2 <data_manager tool_file="data_manager/genomad_datamanager.xml" id="genomad_build_database"> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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3 <data_table name="genomad"> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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4 <output> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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5 <column name="value"/> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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6 <column name="name"/> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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7 <column name="path" output_ref="out_file"> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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8 <move type="directory"> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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9 <source>${path}</source> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">genomad_databases/${path}</target> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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11 </move> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/genomad_databases/${path}</value_translation> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
diff
changeset
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13 <value_translation type="function">abspath</value_translation> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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14 </column> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
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15 </output> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
diff
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16 </data_table> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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17 </data_manager> |
c4ec3d81eeee
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/data_managers/data_manager_genomad commit 483ade5362574a59ddc87e3788334bcbff253805
ufz
parents:
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18 </data_managers> |