# HG changeset patch
# User ufz
# Date 1730185180 0
# Node ID ae07ea142e0fe16020976c1f18eebe4468fa1485
# Parent c23735b45a4a0cf05b0b3571086bd72804f1db26
planemo upload for repository https://github.com/Helmholtz-UFZ/galaxy-tools/tree/main/tools/omero commit d69e684236ce5d36a09e84f1eae6d8c98ed7499b
diff -r c23735b45a4a -r ae07ea142e0f macros.xml
--- a/macros.xml Tue Oct 22 11:53:30 2024 +0000
+++ b/macros.xml Tue Oct 29 06:59:40 2024 +0000
@@ -44,4 +44,13 @@
}
]]>
+
+
+ **OMERO-suite Security Diclaimer:** To utilize the OMERO tools, the user must trust Galaxy instances.
+ The configuration file, which contains your OMERO password and username, is stored in the job working directory.
+ This directory only exists during the runtime of the job and should only be accessible by the system user that runs the job.
+ However, please be aware that your username and password may be exposed to users with administrative rights.
+ We are working on increasing the security of the OMERO suite
+
+
\ No newline at end of file
diff -r c23735b45a4a -r ae07ea142e0f omero_get_id.xml
--- a/omero_get_id.xml Tue Oct 22 11:53:30 2024 +0000
+++ b/omero_get_id.xml Tue Oct 29 06:59:40 2024 +0000
@@ -162,15 +162,23 @@
Tool to fetch project, dataset, images, annotations, tags, table and ROIs IDs user defined OMERO.server.
-Options:
+**Options**:
+
Project -> Project IDs present in the OMERO.server
+
Dataset -> Dataset IDs present in a specific Project or in the server
+
Image -> Image IDs present in a specific Dataset or Project or Well or Plate or in the server
+
Annotation (Key-Value Pairs) -> Annotation IDs linked to an Image or Dataset or Project or Well or Plate
+
Tag -> Tag IDs linked to an Image or Dataset or Project or Well or Plate
+
ROI -> ROI IDs linked to an Image
+
Table -> Table linked to an Image or Dataset or Project or Well or Plate
+@SECURITY_DISCLAIMER@
10.1038/nmeth.1896