Mercurial > repos > ufz > phi_toolkit_report

annotate test-data/checkv_quality_summary/NC_015761.fasta.tabular @ 1:3a7f73d638ba draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 368e8a7322c9763c648637263d4695abc146be13
author ufz
date Tue, 22 Jul 2025 11:09:24 +0000
parents 315c2ed31af1
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
1 contig_id contig_length provirus proviral_length gene_count viral_genes host_genes checkv_quality miuvig_quality completeness completeness_method contamination kmer_freq warnings
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
2 NC_015761.1|provirus_847397_862760 15364 No NA 19 11 1 Low-quality Genome-fragment 44.56 AAI-based (high-confidence) 0.0 1.0
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
3 NC_015761.1|provirus_1007223_1045009 37787 No NA 52 17 0 Medium-quality Genome-fragment 54.82 HMM-based (lower-bound) 0.0 1.03
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
4 NC_015761.1|provirus_3084741_3115735 30995 No NA 41 32 0 High-quality High-quality 97.62 AAI-based (high-confidence) 0.0 1.0