Mercurial > repos > ufz > phi_toolkit_report

annotate test-data/defense_finder_systems/NC_008261.fasta.tabular @ 1:3a7f73d638ba draft default tip

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 368e8a7322c9763c648637263d4695abc146be13
author ufz
date Tue, 22 Jul 2025 11:09:24 +0000
parents 315c2ed31af1
children
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315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
1 sys_id type subtype activity sys_beg sys_end protein_in_syst genes_count name_of_profiles_in_sys
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
2 NC_008261.1_RM_Type_II_5 RM RM_Type_II Defense NC_008261.1_127 NC_008261.1_128 NC_008261.1_127,NC_008261.1_128 2 RM_Type_II__Type_II_MTases_FAM_0,RM_Type_II__Type_II_REase18
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
3 NC_008261.1_RM_Type_III_7 RM RM_Type_III Defense NC_008261.1_340 NC_008261.1_341 NC_008261.1_340,NC_008261.1_341 2 RM_Type_III__Type_III_MTases_FAM_0,RM_Type_III__Type_III_REases_FAM_0.einsi_trimmed
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
4 NC_008261.1_RM_Type_IV_8 RM RM_Type_IV Defense NC_008261.1_962 NC_008261.1_963 NC_008261.1_962,NC_008261.1_963 2 RM_Type_IV__FAM_1,RM_Type_IV__FAM_2
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
5 NC_008261.1_DRT_2_1 DRT DRT_2 Defense NC_008261.1_983 NC_008261.1_983 NC_008261.1_983 1 DRT2__DRT2
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
6 NC_008261.1_RM_Type_II_6 RM RM_Type_II Defense NC_008261.1_985 NC_008261.1_987 NC_008261.1_985,NC_008261.1_986,NC_008261.1_987 3 RM_Type_II__Type_II_MTases_FAM_0,RM_Type_II__Type_II_MTases_FAM_22,RM_Type_II__Type_II_REase34
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
7 NC_008261.1_PD-Lambda-5_2 PD-Lambda-5 PD-Lambda-5 Defense NC_008261.1_1563 NC_008261.1_1564 NC_008261.1_1563,NC_008261.1_1564 2 PD-Lambda-5__PD-Lambda-5_A,PD-Lambda-5__PD-Lambda-5_B
315c2ed31af1 planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff changeset
8 NC_008261.1_RM_Type_I_4 RM RM_Type_I Defense NC_008261.1_2512 NC_008261.1_2515 NC_008261.1_2512,NC_008261.1_2514,NC_008261.1_2515 3 RM__Type_I_MTases_FAM_0,RM__Type_I_REases_FAM_0.einsi_trimmed,RM__Type_I_S_51