Mercurial > repos > ufz > phi_toolkit_report
annotate test-data/defense_finder_systems/NC_017095.fasta.tabular @ 1:3a7f73d638ba draft default tip
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 368e8a7322c9763c648637263d4695abc146be13
| author | ufz |
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| date | Tue, 22 Jul 2025 11:09:24 +0000 |
| parents | 315c2ed31af1 |
| children |
| rev | line source |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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1 sys_id type subtype activity sys_beg sys_end protein_in_syst genes_count name_of_profiles_in_sys |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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2 NC_017095.1_RM_Type_I_4 RM RM_Type_I Defense NC_017095.1_540 NC_017095.1_543 NC_017095.1_540,NC_017095.1_541,NC_017095.1_542,NC_017095.1_543 4 RM__Type_I_MTases_FAM_0,RM__Type_I_MTases_FAM_0,RM__Type_I_REases_FAM_0.einsi_trimmed,RM__Type_I_S_51 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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3 NC_017095.1_CAS_Class1-Subtype-III-B_7 Cas CAS_Class1-Subtype-III-B Defense NC_017095.1_1486 NC_017095.1_1502 NC_017095.1_1486,NC_017095.1_1487,NC_017095.1_1488,NC_017095.1_1489,NC_017095.1_1490,NC_017095.1_1491,NC_017095.1_1495,NC_017095.1_1497,NC_017095.1_1499,NC_017095.1_1500,NC_017095.1_1502 11 HTH_III_1,cas10_III_6,cas2_I_II_III_IV_V_VI_3,cas2_I_II_III_IV_V_VI_3,cas6_I_II_III_IV_V_VI_14,cmr1gr7_III-B_1,cmr3gr5_III-B_III-C_6,cmr4gr7_III-B_III-C_1,cmr5gr11_III-B_4,cmr6gr7_III-B_3,csx1_III_9 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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4 NC_017095.1_CAS_Class1-Subtype-III-A_6 Cas CAS_Class1-Subtype-III-A Defense NC_017095.1_1495 NC_017095.1_1512 NC_017095.1_1495,NC_017095.1_1497,NC_017095.1_1499,NC_017095.1_1500,NC_017095.1_1502,NC_017095.1_1503,NC_017095.1_1504,NC_017095.1_1505,NC_017095.1_1506,NC_017095.1_1507,NC_017095.1_1508,NC_017095.1_1509,NC_017095.1_1512 13 HTH_III_1,cas10_III-A_1,cas1_I_II_III_IV_V_VI_7,cas2_I_II_III_IV_V_VI_3,cas2_I_II_III_IV_V_VI_3,cas6_I_II_III_IV_V_VI_14,cas6_I_II_III_IV_V_VI_19,casR_III_1,csm2gr11_III-A_15,csm3gr7_III-A_1,csm4gr5_III-A_1,csm5gr7_III-A_2,csx1_III_9 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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5 NC_017095.1_CAS_Class1-Subtype-III-A_6 Cas CAS_Class1-Subtype-III-A Defense NC_017095.1_1495 NC_017095.1_1512 NC_017095.1_1495,NC_017095.1_1497,NC_017095.1_1499,NC_017095.1_1500,NC_017095.1_1502,NC_017095.1_1503,NC_017095.1_1504,NC_017095.1_1505,NC_017095.1_1506,NC_017095.1_1507,NC_017095.1_1508,NC_017095.1_1509,NC_017095.1_1512 13 HTH_III_1,cas10_III-A_1,cas1_I_II_III_IV_V_VI_7,cas2_I_II_III_IV_V_VI_3,cas2_I_II_III_IV_V_VI_3,cas6_I_II_III_IV_V_VI_14,cas6_I_II_III_IV_V_VI_19,casR_III_1,csm2gr11_III-A_15,csm3gr7_III-A_1,csm4gr5_III-A_1,csm5gr7_III-A_2,csx1_III_9 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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6 NC_017095.1_Esos_1 Esos Esos Defense NC_017095.1_1541 NC_017095.1_1541 NC_017095.1_1541 1 Esos__VCA0450 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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7 NC_017095.1_VP1840_2 VP1840 VP1840 Defense NC_017095.1_1651 NC_017095.1_1651 NC_017095.1_1651 1 VP1840__VP1840 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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8 NC_017095.1_RM_Type_II_5 RM RM_Type_II Defense NC_017095.1_1662 NC_017095.1_1664 NC_017095.1_1662,NC_017095.1_1663,NC_017095.1_1664 3 RM_Type_II__Type_II_MTases_FAM_38,RM_Type_II__Type_II_MTases_FAM_4,RM_Type_II__Type_II_REase32 |