Mercurial > repos > ufz > phi_toolkit_report
annotate test-data/defense_finder_systems/NC_019936.fasta.tabular @ 1:3a7f73d638ba draft default tip
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 368e8a7322c9763c648637263d4695abc146be13
| author | ufz |
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| date | Tue, 22 Jul 2025 11:09:24 +0000 |
| parents | 315c2ed31af1 |
| children |
| rev | line source |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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1 sys_id type subtype activity sys_beg sys_end protein_in_syst genes_count name_of_profiles_in_sys |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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2 NC_019936.1_Gabija_5 Gabija Gabija Defense NC_019936.1_617 NC_019936.1_618 NC_019936.1_617,NC_019936.1_618 2 Gabija__GajA,Gabija__GajB_3 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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3 NC_019936.1_RM_Type_I_12 RM RM_Type_I Defense NC_019936.1_860 NC_019936.1_862 NC_019936.1_860,NC_019936.1_861,NC_019936.1_862 3 RM__Type_I_MTases_FAM_3,RM__Type_I_REases_FAM_1.einsi_trimmed,RM__Type_I_S_52 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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4 NC_019936.1_Shango_6 Shango Shango Defense NC_019936.1_896 NC_019936.1_898 NC_019936.1_896,NC_019936.1_897,NC_019936.1_898 3 Shango__SngA,Shango__SngB,Shango__SngC |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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5 NC_019936.1_RM_Type_I_13 RM RM_Type_I Defense NC_019936.1_1070 NC_019936.1_1072 NC_019936.1_1070,NC_019936.1_1071,NC_019936.1_1072 3 RM__Type_I_MTases_FAM_1,RM__Type_I_REases_FAM_2.einsi_trimmed,RM__Type_I_S_03 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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6 NC_019936.1_RM_Type_IV_16 RM RM_Type_IV Defense NC_019936.1_1377 NC_019936.1_1377 NC_019936.1_1377 1 RM_Type_IV__FAM_0 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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7 NC_019936.1_AbiC_1 AbiC AbiC Defense NC_019936.1_2817 NC_019936.1_2817 NC_019936.1_2817 1 AbiC__AbiC |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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8 NC_019936.1_RM_Type_I_14 RM RM_Type_I Defense NC_019936.1_3312 NC_019936.1_3317 NC_019936.1_3312,NC_019936.1_3313,NC_019936.1_3314,NC_019936.1_3317 4 RM__Type_I_MTases_FAM_3,RM__Type_I_REases_FAM_1.einsi_trimmed,RM__Type_I_REases_FAM_2.einsi_trimmed,RM__Type_I_S_52 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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9 NC_019936.1_CBASS_III_4 CBASS CBASS_III Defense NC_019936.1_3322 NC_019936.1_3325 NC_019936.1_3322,NC_019936.1_3323,NC_019936.1_3324,NC_019936.1_3325 4 CBASS__Cyclase_II,CBASS__Endonuc_big,CBASS__TRIP13,CBASS__bacHORMA_1 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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10 NC_019936.1_RM_Type_I_15 RM RM_Type_I Defense NC_019936.1_3936 NC_019936.1_3940 NC_019936.1_3936,NC_019936.1_3939,NC_019936.1_3940 3 RM__Type_I_MTases_FAM_0,RM__Type_I_REases_FAM_0.einsi_trimmed,RM__Type_I_S_06 |
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315c2ed31af1
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
ufz
parents:
diff
changeset
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11 NC_019936.1_dCTPdeaminase_7 dCTPdeaminase dCTPdeaminase Defense NC_019936.1_4004 NC_019936.1_4004 NC_019936.1_4004 1 dCTPdeaminase__dCTPdeaminase |