Mercurial > repos > ufz > phi_toolkit_report

diff test-data/checkv_quality_summary/NC_014212.fasta.tabular @ 0:315c2ed31af1 draft

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
author ufz
date Wed, 04 Jun 2025 17:36:40 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/checkv_quality_summary/NC_014212.fasta.tabular	Wed Jun 04 17:36:40 2025 +0000
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+contig_id	contig_length	provirus	proviral_length	gene_count	viral_genes	host_genes	checkv_quality	miuvig_quality	completeness	completeness_method	contamination	kmer_freq	warnings
+NC_014212.1|provirus_1170297_1209132	38836	No	NA	48	10	1	Medium-quality	Genome-fragment	62.91	AAI-based (medium-confidence)	0.0	1.0	
+NC_014212.1|provirus_1746722_1764354	17633	No	NA	38	3	0	Medium-quality	Genome-fragment	89.95	AAI-based (medium-confidence)	0.0	1.01	
+NC_014212.1|provirus_1893193_1914973	21781	No	NA	32	6	0	Medium-quality	Genome-fragment	65.66	AAI-based (medium-confidence)	0.0	1.0