Mercurial > repos > ufz > phi_toolkit_report
diff test-data/checkv_quality_summary/NC_019936.fasta.tabular @ 0:315c2ed31af1 draft
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
| author | ufz |
|---|---|
| date | Wed, 04 Jun 2025 17:36:40 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/checkv_quality_summary/NC_019936.fasta.tabular Wed Jun 04 17:36:40 2025 +0000 @@ -0,0 +1,4 @@ +contig_id contig_length provirus proviral_length gene_count viral_genes host_genes checkv_quality miuvig_quality completeness completeness_method contamination kmer_freq warnings +NC_019936.1|provirus_2347508_2361929 14422 No NA 24 2 0 High-quality High-quality 100.0 AAI-based (high-confidence) 0.0 1.93 high kmer_freq may indicate large duplication; contig >1.5x longer than expected genome length +NC_019936.1|provirus_3233292_3242961 9670 No NA 14 2 0 High-quality High-quality 100.0 AAI-based (high-confidence) 0.0 1.0 +NC_019936.1|provirus_4295725_4304306 8582 No NA 13 2 0 High-quality High-quality 100.0 AAI-based (medium-confidence) 0.0 1.0