Mercurial > repos > ufz > phi_toolkit_report

diff test-data/defense_finder_systems/NC_014364.fasta.tabular @ 0:315c2ed31af1 draft

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planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
author ufz
date Wed, 04 Jun 2025 17:36:40 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/defense_finder_systems/NC_014364.fasta.tabular	Wed Jun 04 17:36:40 2025 +0000
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+sys_id	type	subtype	activity	sys_beg	sys_end	protein_in_syst	genes_count	name_of_profiles_in_sys
+NC_014364.1_TIR-IV_4	TIR-IV	TIR-IV	Defense	NC_014364.1_392	NC_014364.1_393	NC_014364.1_392,NC_014364.1_393	2	TIR-IV__TIR-IV_A,TIR-IV__TIR-IV_B
+NC_014364.1_SoFic_3	SoFIC	SoFic	Defense	NC_014364.1_418	NC_014364.1_418	NC_014364.1_418	1	SoFic__SoFic
+NC_014364.1_MazEF_2	MazEF	MazEF	Defense	NC_014364.1_697	NC_014364.1_698	NC_014364.1_697,NC_014364.1_698	2	MazEF__MazE,MazEF__MazF
+NC_014364.1_CAS_Class1-Subtype-I-C_5	Cas	CAS_Class1-Subtype-I-C	Defense	NC_014364.1_1062	NC_014364.1_1069	NC_014364.1_1062,NC_014364.1_1063,NC_014364.1_1064,NC_014364.1_1065,NC_014364.1_1066,NC_014364.1_1067,NC_014364.1_1068,NC_014364.1_1069	8	WYL_I_II_III_IV_V_VI_4,cas1_I_II_III_IV_V_VI_6,cas2_I_II_III_IV_V_VI_3,cas3_I_5,cas4_I_II_III_IV_V_VI_6,cas5_I-C_11,cas7_I-C_7,cas8c_I-C_4
+NC_014364.1_CAS_Class1-Subtype-IV-B_6	Cas	CAS_Class1-Subtype-IV-B	Defense	NC_014364.1_2494	NC_014364.1_2499	NC_014364.1_2494,NC_014364.1_2496,NC_014364.1_2497,NC_014364.1_2498,NC_014364.1_2499	5	csf1gr8_IV-A_5,csf2gr7_IV_1,csf3gr5_IV-B_1,csf4gr11_IV-B_4,cysH_IV-B_1
+NC_014364.1_AbiE_1	AbiE	AbiE	Defense	NC_014364.1_2619	NC_014364.1_2620	NC_014364.1_2619,NC_014364.1_2620	2	AbiEii__AbiEi_4,AbiEii__AbiEii