Mercurial > repos > ufz > phi_toolkit_report
diff test-data/genomad_virus_genes/NC_000913.fasta.tabular @ 0:315c2ed31af1 draft
planemo upload for repository https://github.com/Helmholtz-UFZ/ufz-galaxy-tools/blob/main/tools/phi-toolkit commit 45c746567f48e6c9bcc19ba4e94e87348df3ac7a
| author | ufz |
|---|---|
| date | Wed, 04 Jun 2025 17:36:40 +0000 |
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| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/genomad_virus_genes/NC_000913.fasta.tabular Wed Jun 04 17:36:40 2025 +0000 @@ -0,0 +1,144 @@ +gene start end length strand gc_content genetic_code rbs_motif marker evalue bitscore uscg plasmid_hallmark virus_hallmark taxid taxname annotation_conjscan annotation_amr annotation_accessions annotation_description +NC_000913.3|provirus_563848_584430_520 563848 564480 633 -1 0.368 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_521 564815 565978 1164 -1 0.467 11 GGAG/GAGG GENOMAD.133037.VP 1.252e-16 85 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_563848_584430_522 566098 566361 264 -1 0.496 11 GGA/GAG/AGG GENOMAD.095346.VP 5.936e-50 171 0 0 1 2561 Caudoviricetes NA NA PF09588;K01143;COG5377;TIGR03033 Phage-related protein, predicted endonuclease +NC_000913.3|provirus_563848_584430_523 566684 566779 96 1 0.521 11 AGGAG GENOMAD.086130.VV 3.579e-13 62 0 0 0 2561 Caudoviricetes NA NA PF08222;TIGR00373;COG4519 CodY helix-turn-helix domain +NC_000913.3|provirus_563848_584430_524 566842 567141 300 1 0.500 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_525 567138 568004 867 1 0.551 11 None NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_526 568315 568647 333 1 0.411 11 AGGA/GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_527 568902 570428 1527 1 0.356 11 AGxAGG/AGGxGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_528 570893 571444 552 1 0.424 11 GGAG/GAGG GENOMAD.189584.CP 1.606e-07 53 0 0 0 1 NA NA NA PF01161;COG1881;TIGR00481 Phosphatidylethanolamine-binding protein +NC_000913.3|provirus_563848_584430_529 571454 572251 798 1 0.362 11 AGxAGG/AGGxGG GENOMAD.166602.PC 1.614e-10 64 0 0 0 1 NA NA NA PF06719;PF12833;TIGR02297;K18991;COG2207 4-hydroxyphenylacetate catabolism regulatory protein HpaA +NC_000913.3|provirus_563848_584430_530 572466 572921 456 1 0.504 11 GGAGG GENOMAD.022699.VV 2.722e-81 265 0 0 0 2561 Caudoviricetes NA NA PF05772 NinB protein +NC_000913.3|provirus_563848_584430_531 572921 573091 171 1 0.485 11 AGGAGG GENOMAD.177576.VP 2.504e-28 107 0 0 0 2561 Caudoviricetes NA NA PF05322 NINE Protein +NC_000913.3|provirus_563848_584430_532 573084 573374 291 1 0.533 11 AGGAGG GENOMAD.038211.VV 1.658e-20 87 0 0 0 2561 Caudoviricetes NA NA PF07102 Putative nuclease YbcO +NC_000913.3|provirus_563848_584430_533 573371 573733 363 1 0.532 11 AGxAGG/AGGxGG GENOMAD.154527.VP 2.554e-18 82 0 0 0 2561 Caudoviricetes NA NA PF05866;K01160;COG4570 Holliday junction resolvase RusA (prophage-encoded endonuclease) +NC_000913.3|provirus_563848_584430_534 573733 573870 138 1 0.478 11 GGA/GAG/AGG GENOMAD.073918.VV 4.945e-10 54 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_563848_584430_535 573956 574339 384 1 0.430 11 GGAG/GAGG GENOMAD.054312.VV 3.04e-60 203 0 0 0 2561 Caudoviricetes NA NA PF06576 Phage antitermination protein Q +NC_000913.3|provirus_563848_584430_536 574481 574699 219 1 0.447 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_537 574737 575717 981 -1 0.550 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_538 575758 576825 1068 -1 0.444 11 GGA/GAG/AGG GENOMAD.042052.CC 7.284e-09 60 0 0 0 1 NA NA NA PF00267;K10940;COG3203 Outer membrane protein (porin) +NC_000913.3|provirus_563848_584430_539 577398 577613 216 1 0.477 11 GGAG/GAGG GENOMAD.208385.VP 5.344e-28 107 0 0 1 2561 Caudoviricetes NA NA PF04971 Bacteriophage P21 holin S +NC_000913.3|provirus_563848_584430_540 577613 578110 498 1 0.476 11 GGAG/GAGG GENOMAD.171676.VP 2.772e-28 113 0 0 1 2561 Caudoviricetes NA NA PF00959;COG3772 Phage-related lysozyme (muramidase), GH24 family +NC_000913.3|provirus_563848_584430_541 578107 578568 462 1 0.513 11 GGxGG GENOMAD.219285.VP 5.677e-41 149 0 0 0 2561 Caudoviricetes NA NA PF03245 Bacteriophage Rz lysis protein +NC_000913.3|provirus_563848_584430_542 578600 578893 294 -1 0.422 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_543 579184 579594 411 -1 0.314 11 GGA/GAG/AGG GENOMAD.227189.VP 1.298e-32 124 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_563848_584430_544 579880 580086 207 1 0.396 11 GGAG/GAGG GENOMAD.227340.VP 5.416e-34 124 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_545 580834 581379 546 1 0.526 11 GGA/GAG/AGG GENOMAD.161251.VP 7.238e-77 254 0 0 1 2561 Caudoviricetes NA NA PF07471;K22014;COG4220 Phage DNA packaging protein, Nu1 subunit of terminase +NC_000913.3|provirus_563848_584430_546 581354 582097 744 1 0.508 11 None GENOMAD.167268.VP 1.572e-44 164 0 0 1 2561 Caudoviricetes NA NA PF02413 Caudovirales tail fibre assembly protein, lambda gpK +NC_000913.3|provirus_563848_584430_547 582152 582583 432 -1 0.412 11 3Base/5BMM NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_563848_584430_548 582875 583060 186 1 0.495 11 GGA/GAG/AGG GENOMAD.178075.VP 3.901e-19 81 0 0 1 2561 Caudoviricetes NA NA PF02413 Caudovirales tail fibre assembly protein, lambda gpK +NC_000913.3|provirus_563848_584430_549 583681 584430 750 1 0.317 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1105 1196867 1197532 666 -1 0.350 11 None NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1106 1197533 1198228 696 -1 0.310 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1107 1198695 1199588 894 1 0.368 11 GGAG/GAGG GENOMAD.088167.PP 1.632e-150 473 0 0 0 1 NA NA NA PF10463;COG2856 Peptidase U49 +NC_000913.3|provirus_1196867_1213107_1108 1199679 1200806 1128 -1 0.447 11 GGA/GAG/AGG GENOMAD.195357.VP 1.34e-89 301 0 0 0 2561 Caudoviricetes NA NA PF09003;K21039 Bacteriophage lambda integrase, Arm DNA-binding domain +NC_000913.3|provirus_1196867_1213107_1109 1200787 1201032 246 -1 0.435 11 GGA/GAG/AGG GENOMAD.095038.VV 1.817e-43 152 0 0 0 2561 Caudoviricetes NA NA PF07825 Excisionase-like protein +NC_000913.3|provirus_1196867_1213107_1110 1201497 1201838 342 1 0.386 11 AGGA GENOMAD.226053.VP 1.147e-47 166 0 0 0 2561 Caudoviricetes NA NA PF11080;K18840 Endoribonuclease GhoS +NC_000913.3|provirus_1196867_1213107_1111 1201776 1202084 309 -1 0.469 11 GGAG/GAGG GENOMAD.226995.VP 1.008e-59 200 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1112 1202259 1202933 675 -1 0.441 11 3Base/5BMM NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1113 1203024 1203224 201 1 0.428 11 GGAGG GENOMAD.218084.VP 6.055e-32 118 0 0 0 2561 Caudoviricetes NA NA PF15943;COG4197 NA +NC_000913.3|provirus_1196867_1213107_1114 1203268 1203825 558 1 0.496 11 GGAG/GAGG GENOMAD.058510.VV 7.507e-87 283 0 0 1 2561 Caudoviricetes NA NA PF06892 Phage regulatory protein CII (CP76) +NC_000913.3|provirus_1196867_1213107_1115 1203822 1204160 339 1 0.499 11 GGAG/GAGG GENOMAD.102216.VV 1.096e-55 189 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1116 1204170 1205537 1368 1 0.543 11 GGAG/GAGG GENOMAD.159591.VP 5.958e-37 149 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1117 1205549 1205731 183 1 0.601 11 GGAG/GAGG GENOMAD.088953.VV 9.423e-11 57 0 0 0 2561 Caudoviricetes NA NA PF10003 NA +NC_000913.3|provirus_1196867_1213107_1118 1205731 1206204 474 1 0.563 11 GGAGG GENOMAD.031947.VV 1.897e-07 52 0 0 1 2561 Caudoviricetes NA NA PF04860;TIGR01537 phage portal protein, HK97 family +NC_000913.3|provirus_1196867_1213107_1119 1206173 1206922 750 1 0.576 11 None GENOMAD.110264.VV 3.24e-56 198 0 0 1 2561 Caudoviricetes NA NA PF04865;COG3948 Phage-related baseplate assembly protein +NC_000913.3|provirus_1196867_1213107_1120 1206913 1207497 585 1 0.573 11 GGA/GAG/AGG GENOMAD.113504.VP 5.104e-87 284 0 0 1 2561 Caudoviricetes NA NA PF10076;COG3778 Uncharacterized protein YmfQ in lambdoid prophage, DUF2313 family +NC_000913.3|provirus_1196867_1213107_1121 1207501 1208130 630 1 0.503 11 GGAG/GAGG GENOMAD.044962.VV 2.458e-85 280 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1122 1208171 1208545 375 1 0.437 11 None GENOMAD.045203.VV 3.842e-40 145 0 0 1 2561 Caudoviricetes NA NA PF02413 Caudovirales tail fibre assembly protein, lambda gpK +NC_000913.3|provirus_1196867_1213107_1123 1208517 1209119 603 -1 0.476 11 GGAG/GAGG GENOMAD.140378.VP 8.011e-41 151 0 0 1 2561 Caudoviricetes NA NA PF02413 NA +NC_000913.3|provirus_1196867_1213107_1124 1209119 1209655 537 -1 0.453 11 AGxAGG/AGGxGG GENOMAD.191048.VP 2.151e-63 215 0 0 0 2561 Caudoviricetes NA NA COG4675 Microcystin-dependent protein (function unknown) +NC_000913.3|provirus_1196867_1213107_1125 1209685 1210239 555 1 0.488 11 AGxAGG/AGGxGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1126 1210346 1211179 834 1 0.384 11 None GENOMAD.030786.VV 1.161e-05 49 0 0 0 2561 Caudoviricetes NA NA PF13395 HNH endonuclease +NC_000913.3|provirus_1196867_1213107_1127 1211413 1211577 165 1 0.467 11 None NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1196867_1213107_1128 1212703 1213107 405 -1 0.368 11 AGGA/GGAG/GAGG GENOMAD.227190.VP 2.116e-26 106 0 0 0 2561 Caudoviricetes NA NA PF07166;COG5562 Prophage-encoded protein YbcV, DUF1398 family +NC_000913.3|provirus_1412000_1434224_1320 1412000 1413235 1236 -1 0.428 11 None GENOMAD.159447.VP 2.063e-29 125 0 0 1 2561 Caudoviricetes NA NA PF12167;K14059;TIGR01634;COG4385 phage tail protein, P2 protein I family +NC_000913.3|provirus_1412000_1434224_1321 1413237 1413452 216 -1 0.454 11 GGAG/GAGG GENOMAD.114098.VV 1.562e-32 120 0 0 0 2561 Caudoviricetes NA NA PF06806 Putative excisionase (DUF1233) +NC_000913.3|provirus_1412000_1434224_1322 1413531 1413740 210 -1 0.352 11 GGAGG GENOMAD.223267.VP 1.749e-30 114 0 0 0 1 NA NA NA PF06688;K19780 NA +NC_000913.3|provirus_1412000_1434224_1323 1413984 1414793 810 -1 0.472 11 AGGA GENOMAD.127355.VP 2.712e-58 205 0 0 0 2561 Caudoviricetes NA NA PF03837;TIGR00616;COG3723 recombinase, phage RecT family +NC_000913.3|provirus_1412000_1434224_1324 1414786 1417386 2601 -1 0.494 11 GGAG/GAGG GENOMAD.084315.VV 4.036e-74 272 0 0 0 2561 Caudoviricetes NA NA PF06630;K10906 Enterobacterial exodeoxyribonuclease VIII +NC_000913.3|provirus_1412000_1434224_1325 1417488 1417763 276 -1 0.391 11 AGGAG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1326 1417838 1418008 171 -1 0.374 11 GGAG/GAGG GENOMAD.110847.VV 1.628e-32 119 0 0 0 1 NA NA NA PF04181 NA +NC_000913.3|provirus_1412000_1434224_1327 1418008 1418229 222 -1 0.410 11 GGAG/GAGG GENOMAD.074955.VV 1.258e-35 129 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1328 1418548 1419159 612 1 0.395 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1329 1419156 1419311 156 -1 0.481 11 GGA/GAG/AGG GENOMAD.222124.VP 1.495e-23 93 0 0 0 2561 Caudoviricetes NA NA PF07151 NA +NC_000913.3|provirus_1412000_1434224_1330 1419322 1419456 135 -1 0.474 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1331 1419765 1420241 477 -1 0.419 11 AGGAG/GGAGG GENOMAD.115833.VV 4.047e-72 239 0 0 0 2561 Caudoviricetes NA NA PF00376;COG5606;TIGR00673;K10123 MerR family regulatory protein +NC_000913.3|provirus_1412000_1434224_1332 1420365 1420661 297 1 0.434 11 GGAG/GAGG GENOMAD.054651.VV 1.154e-09 56 0 0 0 2561 Caudoviricetes NA NA PF15943;COG4197 DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily +NC_000913.3|provirus_1412000_1434224_1333 1420684 1421106 423 1 0.508 11 GGAG/GAGG GENOMAD.072359.VV 8.614e-72 237 0 0 0 2561 Caudoviricetes NA NA PF06254 Putative bacterial toxin ydaT +NC_000913.3|provirus_1412000_1434224_1334 1421119 1421976 858 1 0.479 11 None GENOMAD.195765.VP 5.5e-122 390 0 0 0 2561 Caudoviricetes NA NA PF07120;COG3756 Uncharacterized conserved protein YdaU, DUF1376 family +NC_000913.3|provirus_1412000_1434224_1335 1421983 1422729 747 1 0.527 11 AGxAGG/AGGxGG GENOMAD.047125.VV 5.612e-10 62 0 0 1 2561 Caudoviricetes NA NA PF16463;COG5437;TIGR02126 Phage tail tube protein family +NC_000913.3|provirus_1412000_1434224_1336 1422752 1423312 561 1 0.488 11 GGAG/GAGG GENOMAD.144793.VV 5.225e-30 119 0 0 0 1 NA NA NA PF07789 NA +NC_000913.3|provirus_1412000_1434224_1337 1423345 1423644 300 1 0.533 11 GGA/GAG/AGG GENOMAD.219285.VP 4.845e-42 149 0 0 0 2561 Caudoviricetes NA NA PF03245 Bacteriophage Rz lysis protein +NC_000913.3|provirus_1412000_1434224_1338 1423815 1425239 1425 1 0.382 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1339 1425377 1425640 264 1 0.481 11 GGA/GAG/AGG GENOMAD.159709.VV 5.097e-06 45 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1340 1425621 1425980 360 1 0.472 11 None GENOMAD.109865.VV 7.702e-05 43 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1341 1426454 1427482 1029 1 0.468 11 AGGAG GENOMAD.120741.VP 1.03e-151 479 0 0 1 2561 Caudoviricetes NA NA COG5281 Phage-related minor tail protein +NC_000913.3|provirus_1412000_1434224_1342 1427482 1427613 132 1 0.553 11 None NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1343 1427746 1428726 981 -1 0.555 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1344 1429049 1432411 3363 1 0.533 11 None GENOMAD.020617.VV 5.058e-116 406 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1345 1432411 1432986 576 1 0.481 11 GGAG/GAGG GENOMAD.167268.VP 3.58e-55 192 0 0 1 2561 Caudoviricetes NA NA PF02413 Caudovirales tail fibre assembly protein, lambda gpK +NC_000913.3|provirus_1412000_1434224_1346 1433084 1433674 591 -1 0.448 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1412000_1434224_1347 1433991 1434224 234 -1 0.359 11 AGGA GENOMAD.221767.PV 3.984e-26 102 0 0 0 1 NA NA NA PF10965 Biofilm development protein YmgB/AriR +NC_000913.3|provirus_1627517_1653915_1513 1627517 1628263 747 1 0.506 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1514 1628352 1629038 687 1 0.501 11 None NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1515 1629215 1629418 204 1 0.520 11 AGGAG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1516 1629453 1630913 1461 -1 0.494 11 AGGA NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1517 1631002 1632285 1284 -1 0.469 11 None NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1518 1633072 1633305 234 1 0.355 11 AGGA GENOMAD.221767.PV 3.984e-26 102 0 0 0 1 NA NA NA PF10965 Biofilm development protein YmgB/AriR +NC_000913.3|provirus_1627517_1653915_1519 1633622 1634212 591 1 0.448 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1520 1634310 1634885 576 -1 0.479 11 GGAG/GAGG GENOMAD.167268.VP 3.58e-55 192 0 0 1 2561 Caudoviricetes NA NA PF02413 Caudovirales tail fibre assembly protein, lambda gpK +NC_000913.3|provirus_1627517_1653915_1521 1634885 1635847 963 -1 0.526 11 None GENOMAD.211480.VP 3.667e-69 239 0 0 0 2561 Caudoviricetes NA NA COG5301 Phage-related tail fibre protein +NC_000913.3|provirus_1627517_1653915_1522 1635798 1636367 570 -1 0.537 11 GGA/GAG/AGG GENOMAD.161251.VP 1.255e-74 248 0 0 1 2561 Caudoviricetes NA NA PF07471;K22014;COG4220 Phage DNA packaging protein, Nu1 subunit of terminase +NC_000913.3|provirus_1627517_1653915_1523 1637047 1637457 411 1 0.316 11 GGA/GAG/AGG GENOMAD.227189.VP 1.298e-32 124 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1524 1637609 1637782 174 -1 0.299 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1525 1638455 1638667 213 -1 0.404 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1526 1639030 1639527 498 -1 0.458 11 GGA/GAG/AGG GENOMAD.062288.VV 1.369e-70 235 0 0 0 2561 Caudoviricetes NA NA PF10721 NA +NC_000913.3|provirus_1627517_1653915_1527 1639524 1640057 534 -1 0.506 11 None GENOMAD.171676.VP 8.945e-29 115 0 0 1 2561 Caudoviricetes NA NA PF00959;COG3772 Phage-related lysozyme (muramidase), GH24 family +NC_000913.3|provirus_1627517_1653915_1528 1640054 1640365 312 -1 0.439 11 AGGAG GENOMAD.225519.VP 1.173e-50 174 0 0 0 1 NA NA NA PF07041 NA +NC_000913.3|provirus_1627517_1653915_1529 1640370 1640576 207 -1 0.473 11 AGGA GENOMAD.208385.VP 5.126e-27 104 0 0 1 2561 Caudoviricetes NA NA PF04971 Bacteriophage P21 holin S +NC_000913.3|provirus_1627517_1653915_1530 1640618 1640737 120 1 0.342 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1531 1641339 1641554 216 -1 0.356 11 AGGA NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1532 1641855 1642067 213 1 0.484 11 AGGA NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1533 1642489 1643241 753 -1 0.481 11 GGAG/GAGG GENOMAD.136613.VP 1.109e-26 112 0 0 0 2561 Caudoviricetes NA NA PF03589;TIGR02642 Antitermination protein +NC_000913.3|provirus_1627517_1653915_1534 1643255 1644304 1050 -1 0.521 11 GGAGG GENOMAD.196019.VP 1.481e-50 186 0 0 0 2561 Caudoviricetes NA NA PF06147 dATP/dGTP pyrophosphohydrolase +NC_000913.3|provirus_1627517_1653915_1535 1644651 1644902 252 -1 0.409 11 AGGA NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1536 1645119 1645274 156 -1 0.519 11 AGGAG GENOMAD.136858.PV 7.473e-23 91 0 0 0 2561 Caudoviricetes NA NA PF01848;K18919 Hok/gef family +NC_000913.3|provirus_1627517_1653915_1537 1645346 1645633 288 -1 0.469 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1538 1645633 1645872 240 -1 0.471 11 GGAG/GAGG GENOMAD.151401.PV 4.39e-26 102 0 0 0 1 NA NA NA PF04221;TIGR02384;COG3077;K07473 addiction module antitoxin, RelB/DinJ family +NC_000913.3|provirus_1627517_1653915_1539 1646405 1646737 333 1 0.429 11 AGGAG GENOMAD.078672.PP 6.68e-60 201 0 0 0 1 NA NA NA PF14282 FlxA-like protein +NC_000913.3|provirus_1627517_1653915_1540 1647122 1647349 228 -1 0.421 11 GGAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1541 1647346 1647636 291 -1 0.505 11 GGxGG GENOMAD.150946.VV 3.745e-51 175 0 0 0 1 NA NA NA PF06254 Putative bacterial toxin ydaT +NC_000913.3|provirus_1627517_1653915_1542 1647620 1647850 231 -1 0.459 11 GGA/GAG/AGG GENOMAD.108381.VV 1.622e-34 126 0 0 0 2561 Caudoviricetes NA NA K22302 NA +NC_000913.3|provirus_1627517_1653915_1543 1647934 1648341 408 1 0.436 11 None NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1544 1648508 1648663 156 1 0.481 11 GGAG/GAGG GENOMAD.222124.VP 6.689e-24 94 0 0 0 2561 Caudoviricetes NA NA PF07151 NA +NC_000913.3|provirus_1627517_1653915_1545 1648665 1648793 129 1 0.465 11 GGA/GAG/AGG GENOMAD.136713.VV 1.3e-20 84 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1546 1648823 1649041 219 1 0.479 11 GGAG/GAGG GENOMAD.180239.VV 1.159e-43 152 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1547 1649045 1649209 165 -1 0.509 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1548 1649609 1649797 189 1 0.360 11 GGAG/GAGG GENOMAD.189052.VV 3.595e-35 127 0 0 0 2561 Caudoviricetes NA NA PF05358;K22304 DicB protein +NC_000913.3|provirus_1627517_1653915_1549 1649794 1649985 192 1 0.432 11 AGGA GENOMAD.094923.VV 7.175e-29 109 0 0 0 2561 Caudoviricetes NA NA PF07358 NA +NC_000913.3|provirus_1627517_1653915_1550 1650078 1650998 921 1 0.497 11 GGAG/GAGG GENOMAD.075680.VV 3.9e-07 54 0 0 0 2561 Caudoviricetes NA NA K10906 NA +NC_000913.3|provirus_1627517_1653915_1551 1650995 1651537 543 1 0.541 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1552 1651512 1652708 1197 1 0.422 11 None GENOMAD.099267.VV 1.899e-19 94 0 0 0 2561 Caudoviricetes NA NA PF00589;TIGR02224;COG4973;K03733 tyrosine recombinase XerC +NC_000913.3|provirus_1627517_1653915_1553 1652728 1652838 111 -1 0.414 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_1627517_1653915_1554 1652896 1653915 1020 -1 0.449 11 AGGAG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2313 2461306 2462646 1341 1 0.498 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2314 2463012 2464070 1059 1 0.355 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2315 2464252 2465007 756 -1 0.519 11 GGAG/GAGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2316 2465301 2466233 933 1 0.486 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2317 2466545 2467702 1158 1 0.478 11 GGA/GAG/AGG GENOMAD.064492.VV 0.0007762 44 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2318 2468214 2469134 921 1 0.395 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2319 2469131 2470462 1332 1 0.276 11 GGA/GAG/AGG NA NA NA 0 0 0 1 NA NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2320 2470803 2471105 303 1 0.545 11 GGA/GAG/AGG GENOMAD.167268.VP 2.711e-17 78 0 0 1 2561 Caudoviricetes NA NA PF02413 Caudovirales tail fibre assembly protein, lambda gpK +NC_000913.3|provirus_2461306_2476510_2321 2471077 2471517 441 -1 0.454 11 GGAG/GAGG GENOMAD.045203.VV 2.366e-80 262 0 0 1 2561 Caudoviricetes NA NA PF02413 Caudovirales tail fibre assembly protein, lambda gpK +NC_000913.3|provirus_2461306_2476510_2322 2471544 2472146 603 -1 0.509 11 GGAG/GAGG GENOMAD.044962.VV 4.611e-91 296 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2323 2472112 2472387 276 -1 0.518 11 GGxGG GENOMAD.178309.VP 1.935e-09 55 0 0 0 2561 Caudoviricetes NA NA PF05869;TIGR01712 phage N-6-adenine-methyltransferase +NC_000913.3|provirus_2461306_2476510_2324 2472387 2472881 495 -1 0.545 11 AGGA GENOMAD.225234.VP 1.741e-67 226 0 0 0 2561 Caudoviricetes NA NA PF06069 PerC transcriptional activator +NC_000913.3|provirus_2461306_2476510_2325 2472878 2473246 369 -1 0.556 11 GGA/GAG/AGG GENOMAD.086968.VV 4.891e-69 228 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2326 2473604 2473966 363 1 0.501 11 AGGAG GENOMAD.056235.VV 4.359e-53 182 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2327 2474032 2474856 825 1 0.457 11 GGAG/GAGG GENOMAD.052651.VV 8.505e-66 227 0 0 0 2561 Caudoviricetes NA NA PF10065;COG5532 Uncharacterized conserved protein YfdQ, DUF2303 family +NC_000913.3|provirus_2461306_2476510_2328 2474984 2475520 537 1 0.462 11 GGAG/GAGG GENOMAD.172054.VC 5.137e-36 136 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2329 2475511 2475873 363 1 0.471 11 GGAG/GAGG GENOMAD.067358.VV 4.901e-68 225 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2330 2475873 2476178 306 1 0.428 11 GGAGG GENOMAD.222350.VP 2.161e-43 153 0 0 0 2561 Caudoviricetes NA NA NA NA +NC_000913.3|provirus_2461306_2476510_2331 2476310 2476510 201 1 0.438 11 GGAG/GAGG GENOMAD.195460.VP 1.864e-28 108 0 0 0 2561 Caudoviricetes NA NA COG2452 NA