diff WebServiceExtensionsV1.1/WebServiceToolWorkflow_REST_SOAP/ParserForWADL/src/lsdis/WADLParserDriver.java @ 0:049760c677de default tip

Galaxy WSExtensions added successfully

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/WebServiceExtensionsV1.1/WebServiceToolWorkflow_REST_SOAP/ParserForWADL/src/lsdis/WADLParserDriver.java	Tue Jul 05 19:34:18 2011 -0400
@@ -0,0 +1,274 @@
+package lsdis;
+import java.net.MalformedURLException;
+import java.net.URL;
+
+import lsdis.*;
+
+import java.util.ArrayList;
+import java.util.List;
+
+
+	/*
+	 * generate url's and param names
+	 */
+
+public class WADLParserDriver {
+	
+	 
+	// private  List<List<String>> paramNames = new ArrayList<List<String>>();
+	 private  List<Method> definedMethods = new ArrayList<Method>();
+	
+	 private  int count = 0;
+	 private  List<Method> crossReferencedMethods = new ArrayList<Method>();
+	 private  List<String> crossReferencedMethodURLS = new ArrayList<String>();
+	
+	 private List<Method> completeMethodList = new ArrayList<Method>();
+	 private  List<String> url = new ArrayList<String>();
+	 
+	 
+	 public List<Method> getCompleteMethodList() {
+		return completeMethodList;
+	 }
+
+	public List<String> getUrl() {
+		return url;
+	 }
+
+	
+	 
+	public static void main(String[] args) throws Exception {
+
+	WADLParserDriver mpw = new WADLParserDriver();
+	//mpw.parse(new URL("http://cs.uga.edu/~ganjoo/galaxy/DDBJNCBIGenomeAnnotationGetGeneList.wadl"));
+	mpw.parse(new URL("http://eupathdb.org/webservices/GeneQuestions/GenesByMolecularWeight.wadl"));
+	mpw.displayInfo();
+	
+	}
+	
+	public void parse(URL fileURL) throws Exception {
+		int i=0;
+		
+				
+		
+		//URL fileURL = new URL("http://www.eupathdb.org/webservices/GeneQuestions/GenesByMolecularWeight.wadl");
+		
+		WADLParser wadlP = new WADLParser(fileURL);
+		
+		Application app= new Application();
+	    app=wadlP.getApplicationOfWADL();
+		
+	    String temp = "";
+	    String tempHref="";
+	    
+	    for(Resources resources : app.getResources()){
+	    	temp = resources.getBase().toString();
+	    	//traverseSubResources(temp, resources);
+	    	System.out.println(temp);
+	    	for(Resource resource : resources.getResources()){
+	    		
+	    		temp = temp + resource.getPath();
+	    		traverseResource(temp, resource);
+	    		//traverseSubResources(temp, resource);
+	    		System.out.println("resource path"+resource.getPath());
+	    		if(resource.getParams()!=null && resource.getParams().size()!=0){
+	    			for(Param param: resource.getParams()){
+	    				System.out.println("params "+ param);
+	    			}
+	    		}
+	    		
+	    		
+	    	}
+	    		
+	    }
+	  
+	    traverseCrossReferencedMethods();
+	    displayInfo();
+	    
+	}//end main
+
+	
+	public void traverseSubResources(String passedString,Resource resource){
+				
+				
+		
+				
+		for(Resource subResource : resource.getResources()){
+			
+			String temp = passedString;
+			
+			if(temp.charAt(temp.length()-1) != '/')
+				temp += "/";
+			temp += subResource.getPath();
+			
+//			if(subResource.getParams()!=null && subResource.getParams().size()!=0){
+//    			for(Param param: subResource.getParams()){
+//    				if(param.getStyle().equalsIgnoreCase("template")){
+//    					System.out.println("params "+ param.getName());
+//    					temp=temp+"/{"+param.getName()+"}";
+//    				}
+//    			}
+//    		}
+			
+			//start
+			
+    				    		
+    		for(Method method : subResource.getMethods()){
+    			if(method.getId() != null){
+    				url.add(count, temp);
+    				definedMethods.add(method);
+    				
+    				completeMethodList.add(count,method);
+    				
+    				count++;
+    			}
+    			else if(method.getHref()!=null){	//will work only for intra-document cross-reference currently
+
+    				crossReferencedMethods.add(method);
+    				crossReferencedMethodURLS.add(temp);
+
+    			}
+    			else{
+    			
+    				System.out.println("ERROR : Method " + method.getName() + " does not have an id or a href !!" );
+    			}
+    		}
+						
+		
+		traverseSubResources(temp, subResource);
+			
+		}//end for
+			
+	}//end method
+	
+	public void traverseResource(String passedString,Resource resource){
+		
+		
+		
+		String temp = passedString ;
+				
+			//start
+			
+    				    		
+    		for(Method method : resource.getMethods()){
+    			if(method.getId() != null){
+    				url.add(count, temp);
+    				definedMethods.add(method);
+    				
+    				completeMethodList.add(count,method);
+    				
+    				count++;
+    			}
+    			else if(method.getHref()!=null){	//will work only for intra-document cross-reference currently
+
+    				crossReferencedMethods.add(method);
+    				crossReferencedMethodURLS.add(temp);
+
+    			}
+    			else{
+    			
+    				System.out.println("ERROR : Method " + method.getName() + " does not have an id or a href !!" );
+    			}
+    		}
+						
+		
+		traverseSubResources(temp, resource);
+						
+	}//end method
+	
+	public void traverseCrossReferencedMethods(){
+		int i =0;
+		String tempHref = "";
+		
+		for(Method method : crossReferencedMethods){
+		
+			url.add(count, crossReferencedMethodURLS.get(i));
+			
+			
+			
+			tempHref = method.getHref().toString();
+			if(tempHref.startsWith("#")){
+				tempHref = tempHref.substring(1);
+			}
+			
+			for(Method m : definedMethods){
+				if(m.getId().equals(tempHref)){
+					
+					Method tempMethod = new Method(m.getDocs(),m.getRequest(),m.getResponse(),m.getId(),m.getName(),method.getHref()); 
+					completeMethodList.add(count,tempMethod);
+					
+					break;
+				
+				}
+		
+			}
+			
+			count++;
+			i++;
+		}
+		
+		
+		
+	}//end of method
+	
+//	public void displayInfo(){
+//		if(url.size()!=paramNames.size()){
+//			System.out.println("Debug the code !!!! :( ");
+//			System.exit(0);
+//		}
+//		for(int i=0;i<url.size();i++){
+//			System.out.println(url.get(i));
+//			
+//			for(String p : paramNames.get(i)){
+//				System.out.print(p + ", ");
+//			}
+//			
+//			System.out.println();
+//			System.out.println();
+//		}
+//		
+//	}
+	
+	public void displayInfo(){
+		
+		if(url.size()!=completeMethodList.size()){
+			System.out.println("Debug the code !!!! :( ");
+			System.exit(0);
+		}
+		for(int i=0;i<url.size();i++){
+			System.out.println(url.get(i));
+			
+			for(Method m : completeMethodList){
+				System.out.println(m.getName());
+				for(Param param : m.getRequest().getParams()){
+					System.out.println("\t"+param.getName());
+					System.out.println("\t"+param.isRequired());
+					for(Doc doc : param.getDocs()){
+						if(doc.getTitle().equalsIgnoreCase("prompt")){
+							System.out.println("Prompt: " + doc.getInnerText());
+						}
+						
+					}
+					List<Option> ops = param.getOptions();
+					
+//					if(ops.size()==0){
+//						System.out.println("No options available");
+//					}
+//					else{
+//					System.out.println("\t options:");
+//					
+//					for(Option option:param.getOptions()){
+//						System.out.println("\t "+option.getName());
+//					}
+//					}
+				}
+			}
+			
+			System.out.println();
+			System.out.println();
+		}
+	}
+}
+
+
+
+