Mercurial > repos > ulfschaefer > package_python_2_7_lxml_3_2_3
changeset 0:a5fe4836eb99 draft
Uploaded
author | ulfschaefer |
---|---|
date | Fri, 08 Jul 2016 09:49:57 -0400 |
parents | |
children | 19de9ae7e435 |
files | tool_dependencies.xml |
diffstat | 1 files changed, 34 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri Jul 08 09:49:57 2016 -0400 @@ -0,0 +1,34 @@ +<?xml version='1.0' encoding='utf-8'?> +<tool_dependency> + <package name="python" version="2.7.10"> + <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="lxml" version="3.2.3"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://pypi.python.org/packages/source/l/lxml/lxml-3.2.3.tar.gz</action> + <action type="set_environment_for_install"> + <repository changeset_revision="a28e3c30828d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <package name="python" version="2.7.10" /> + </repository> + </action> + <action type="make_directory">$INSTALL_DIR/lib/python</action> + <action type="make_directory">$INSTALL_DIR/lib/python/bin</action> + <action type="shell_command"> + export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && + python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/lib/python/bin + </action> + <action type="set_environment"> + <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> + <environment_variable action="append_to" name="PATH">$INSTALL_DIR/lib/python/bin</environment_variable> + <environment_variable action="set_to" name="PYTHONPATH_PYVCF">$INSTALL_DIR/lib/python</environment_variable> + </action> + </actions> + </install> + <readme> + This Galaxy Tool shed package installs verion 3.2.3 of lxml (http://lxml.de) for use with python 2.7.10. + + The corresponding PYTHONPATH is accessible via PYTHONPATH_PYVCF + </readme> + </package> +</tool_dependency>