Mercurial > repos > ulfschaefer > phemost

diff tool_dependencies.xml @ 0:653407a0018e draft default tip

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author ulfschaefer
date Wed, 13 Jul 2016 06:12:58 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Jul 13 06:12:58 2016 -0400
@@ -0,0 +1,33 @@
+<?xml version="1.0"?>
+<tool_dependency>
+	<package name="python" version="2.7.10">
+        <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="lxml" version="3.2.3">
+        <repository changeset_revision="bafab0f9cda1" name="package_python_2_7_lxml_3_2_3" owner="ulfschaefer" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+    <package name="pyyaml" version="3.11">
+        <repository changeset_revision="99267d131c05" name="package_python_2_7_pyyaml_3_11" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+    <package name="numpy" version="1.9">
+        <repository changeset_revision="f24fc0b630fc" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+	<package name="biopython" version="1.66">
+        <repository changeset_revision="c722591ee0aa" name="package_python_2_7_biopython_1_66" owner="ulfschaefer" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+	<package name="bowtie2" version="2.1.0">
+        <repository changeset_revision="017a00c265f1" name="package_bowtie2_2_1_0" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+    <package name="samtools" version="0.1.18">
+        <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+    <package name="emboss" version="5.0.0">
+        <repository changeset_revision="cf998ddc0542" name="package_emboss_5_0_0" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+    <package name="blast+" version="2.2.27">
+        <repository changeset_revision="b614c5772f73" name="package_blast_plus_2_2_27" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+	<package name="phemost" version="1.0">
+        <repository changeset_revision="028671f26917" name="package_phemost_1_0" owner="ulfschaefer" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"/>
+    </package>
+</tool_dependency>