Mercurial > repos > ulfschaefer > vcfs2fasta
comparison vcfs2fasta.xml @ 17:a2ffbf5f50c1 draft
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| author | ulfschaefer |
|---|---|
| date | Fri, 18 Dec 2015 05:13:12 -0500 |
| parents | f72039c5faa4 |
| children |
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| 16:1d0bc21232ec | 17:a2ffbf5f50c1 |
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| 1 <tool id="vcfs2fasta" name="VCFs to fasta" version="1.0"> | 1 <tool id="vcfs2fasta" name="VCFs to fasta" version="1.0"> |
| 2 <description>Takes a set of VCF files and outputs a multi fasta file with only the variant positions.</description> | 2 <description>Takes a set of VCF files and outputs a multi fasta file with only the variant positions.</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="2.7.10">python</requirement> | 4 <requirement type="package" version="2.7.10">python</requirement> |
| 5 <requirement type="package" version="0.6.7">pyvcf</requirement> | 5 <requirement type="package" version="0.6.8dev">pyvcf</requirement> |
| 6 <requirement type="package" version="3.11">pyyaml</requirement> | 6 <requirement type="package" version="3.11">pyyaml</requirement> |
| 7 <requirement type="package" version="2.0.2">bintrees</requirement> | 7 <requirement type="package" version="2.0.2">bintrees</requirement> |
| 8 <requirement type="package" version="1.66">biopython</requirement> | 8 <requirement type="package" version="1.66">biopython</requirement> |
| 9 <requirement type="package" version="1.4">matplotlib</requirement> | 9 <requirement type="package" version="1.4">matplotlib</requirement> |
| 10 </requirements> | 10 </requirements> |