Mercurial > repos > urgi-team > tandem_repeats_finder

diff tool_dependencies.xml @ 0:a2e1d1f25e35 draft default tip

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author urgi-team
date Thu, 10 Jul 2014 09:32:30 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Jul 10 09:32:30 2014 -0400
@@ -0,0 +1,32 @@
+<?xml version="1.0"?>
+<tool_dependency>
+	<package name="tandem_repeats_finder" version="4.0">
+		<install version="1.0">
+			<actions_group>
+				<actions os="linux" architecture="x86_64">
+					<action type="download_by_url" target_filename="trf">http://tandem.bu.edu/trf/downloads/trf400.linuxAMD64.exe</action>
+					<action type="move_directory_files">
+						<source_directory>.</source_directory>
+						<destination_directory>$INSTALL_DIR</destination_directory>
+					</action>
+					<action type="chmod">
+						<file mode="750">$INSTALL_DIR/trf</file>
+					</action>
+				</actions>
+				<actions os="linux" architecture="i386">
+					<action type="download_by_url" target_filename="trf">http://tandem.bu.edu/trf/downloads/trf400.linux.exe</action>
+					<action type="move_directory_files">
+						<source_directory>.</source_directory>
+						<destination_directory>$INSTALL_DIR</destination_directory>
+					</action>
+					<action type="chmod">
+						<file mode="750">$INSTALL_DIR/trf</file>
+					</action>
+				</actions>
+				<action type="set_environment">
+					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+				 </action>
+			</actions_group>
+		</install>
+	</package>
+</tool_dependency>