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diff VCFGandalfTools/test-data/VCFCarto_input.tab @ 2:6bebeb76fa8d draft

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author urgi-team
date Tue, 05 Apr 2016 08:33:41 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/VCFGandalfTools/test-data/VCFCarto_input.tab	Tue Apr 05 08:33:41 2016 -0400
@@ -0,0 +1,76 @@
+CHROM	POS	reference	REF1	G01	REF2	G02	G03	G04	G05	G06	G07	G08	G09	G10	G11	G12
+Chr1	1	A	R	R	R	R	U	R	R	R	R	R	R	R	R	R
+Chr1	2	T	R	R	R	R	R	U	R	R	R	R	R	R	R	R
+Chr1	3	G	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr1	4	G	R	R	R	R	R	R	R	R	R	R	R	R	F	R
+Chr1	5	G	R	R	R	R	R	R	U	F	R	R	R	R	R	R
+Chr1	6	C	R	R	R	R	R	R	R	R	R	R	R	R	R	U
+Chr1	7	A	G	C	C	C	F	C	C	C	C	C	G	C	G	G
+Chr1	8	G	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr1	9	C	R	T	T	R	T	T	T	U	R	T	R	T	T	T
+Chr1	10	T	R	R	R	R	R	R	R	R	R	R	R	R	R	U
+Chr1	11	T	R	R	R	R	R	R	R	R	R	R	R	F	R	R
+Chr1	12	A	R	R	R	R	U	R	R	R	R	F	R	R	R	R
+Chr1	13	A	R	R	G	G	R	F	R	F	G	R	G	R	R	F
+Chr1	14	A	R	R	R	R	R	R	R	R	F	R	R	R	R	R
+Chr1	15	G	R	R	R	U	R	F	R	R	R	R	R	R	U	U
+Chr1	16	G	A	R	R	A	R	R	U	F	R	R	A	A	R	A
+Chr1	17	A	R	G	G	R	U	R	R	G	G	R	G	U	R	G
+Chr1	18	C	R	R	R	R	R	U	R	R	R	R	R	R	R	R
+Chr1	19	G	C	U	R	C	R	C	U	R	R	C	C	C	R	C
+Chr1	20	G	A	U	R	A	R	A	U	R	R	A	A	A	R	A
+Chr1	21	G	T	U	R	T	R	T	U	R	R	T	T	T	R	T
+Chr1	22	A	T	U	R	T	R	T	U	R	R	T	T	T	R	T
+Chr1	23	C	T	T	R	T	R	R	R	T	R	U	T	R	T	T
+Chr1	24	T	R	R	R	R	R	U	R	R	R	R	R	R	R	F
+Chr1	25	G	R	F	R	R	R	R	R	U	R	F	R	R	R	R
+Chr1	26	T	R	R	C	C	C	C	C	R	R	C	R	C	R	U
+Chr1	27	C	R	R	G	G	G	G	R	G	R	G	R	G	R	R
+Chr1	28	C	G	T	T	T	G	G	T	T	F	T	G	T	T	G
+Chr1	29	G	T	R	R	R	R	T	R	T	R	T	T	R	T	R
+Chr1	30	T	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr1	31	A	R	R	R	R	F	R	R	R	R	F	R	R	R	R
+Chr1	32	A	G	G	R	G	G	G	R	R	G	G	G	G	G	R
+Chr1	33	G	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr1	34	C	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr1	35	C	R	R	R	R	R	F	R	R	R	R	R	R	R	U
+Chr2	1	T	R	R	R	F	R	R	R	R	R	R	R	R	R	R
+Chr2	2	A	C	R	R	C	C	U	R	R	R	R	C	C	C	U
+Chr2	3	C	R	R	R	R	R	R	U	R	R	R	R	R	R	R
+Chr2	4	C	R	R	R	R	R	R	R	U	R	R	R	R	F	R
+Chr2	5	T	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr2	6	C	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr2	7	A	T	F	R	U	R	T	T	T	R	T	T	F	T	T
+Chr2	8	T	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr2	9	C	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr2	10	G	R	T	T	T	T	R	T	R	R	R	R	R	U	R
+Chr2	11	C	R	A	A	A	A	R	A	R	R	R	R	R	U	R
+Chr2	12	A	R	T	T	T	T	R	T	R	R	R	R	R	U	R
+Chr2	13	T	R	C	C	C	C	R	C	R	R	R	R	R	U	R
+Chr2	14	C	T	A	A	T	A	T	A	T	A	T	T	A	A	A
+Chr2	15	T	R	R	R	F	R	R	R	R	R	R	R	R	R	R
+Chr2	16	A	R	R	R	R	R	R	R	U	R	R	R	R	R	R
+Chr2	17	A	R	U	R	R	R	R	R	R	R	R	R	R	R	F
+Chr2	18	G	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr2	19	A	R	R	R	R	R	R	F	R	R	R	R	R	R	R
+Chr2	20	C	R	R	R	R	R	R	R	F	R	R	R	R	R	R
+Chr2	21	G	A	R	R	A	A	A	R	R	R	A	A	R	R	R
+Chr2	22	A	R	R	R	R	R	R	F	R	R	R	R	R	R	R
+Chr2	23	A	R	R	T	T	R	R	T	T	T	T	T	R	R	R
+Chr2	24	T	R	R	R	R	R	R	U	R	R	R	R	R	R	F
+Chr2	25	T	R	A	A	R	R	A	R	A	R	R	A	R	R	A
+Chr2	26	G	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr2	27	A	R	R	R	R	R	R	R	R	R	R	R	R	U	R
+Chr2	28	C	R	U	R	R	F	F	R	R	F	R	F	U	R	R
+Chr2	29	G	R	R	R	R	R	R	F	R	R	R	R	R	R	R
+Chr2	30	T	A	A	G	A	G	G	A	A	G	F	G	G	G	U
+Chr2	31	A	R	R	R	R	R	R	R	R	U	U	R	R	R	R
+Chr2	32	G	R	R	R	R	R	R	U	U	R	R	R	R	R	R
+Chr2	33	G	R	U	R	R	R	R	U	R	R	R	R	R	R	R
+Chr2	34	A	R	R	R	U	R	R	R	R	R	R	R	R	R	R
+Chr2	35	G	R	R	R	R	R	R	R	R	R	R	R	R	R	R
+Chr2	36	T	R	R	R	R	R	R	U	R	R	R	R	R	R	R
+Chr3	1	T	U	R	R	R	R	R	U	R	R	R	R	R	R	R
+Chr3	2	T	R	R	U	R	R	R	U	R	R	R	R	R	R	R
+Chr3	3	T	F	R	R	R	R	R	U	R	R	R	R	R	R	R
+Chr3	4	T	R	R	F	R	R	R	U	R	R	R	R	R	R	R