Mercurial > repos > urgi-team > vcfgandalftools

view VCFGandalfTools/tool_dependencies.xml @ 2:6bebeb76fa8d draft

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author urgi-team
date Tue, 05 Apr 2016 08:33:41 -0400
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<?xml version="1.0"?>
<tool_dependency>
	<package name="VCF_Gandalf_Tools" version="1.0">
		<install version="1.0">
			<actions>
				<action type="download_by_url">https://urgi.versailles.inra.fr/download/gandalf/VCFtools-1.2.tar.gz</action>
				<action type="shell_command">python setup_VCFtools.py install</action>
				<action type="move_directory_files">
					<source_directory>.</source_directory>
					<destination_directory>$INSTALL_DIR</destination_directory>
				</action>
				<action type="set_environment">
					<environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR</environment_variable>
					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
				</action>
			</actions>
		</install>
	</package>
</tool_dependency>