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view VCFGandalfTools/tool_dependencies.xml @ 3:1fd1f727c330 draft default tip

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author urgi-team
date Fri, 08 Apr 2016 12:07:35 -0400
parents 6bebeb76fa8d
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<?xml version="1.0"?>
<tool_dependency>
	<package name="VCF_Gandalf_Tools" version="1.0">
		<install version="1.0">
			<actions>
				<action type="download_by_url">https://urgi.versailles.inra.fr/download/gandalf/VCFtools-1.2.tar.gz</action>
				<action type="shell_command">python setup_VCFtools.py install</action>
				<action type="move_directory_files">
					<source_directory>.</source_directory>
					<destination_directory>$INSTALL_DIR</destination_directory>
				</action>
				<action type="set_environment">
					<environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR</environment_variable>
					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
				</action>
			</actions>
		</install>
	</package>
</tool_dependency>