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Bugfix: (ribocounts) Read length was sent as rnafile argument in check_optional_arguments
author Vimalkumar Velayudhan <vimal@biotechcoder.com>
date Thu, 13 Aug 2015 15:03:20 +0100
parents 8e1efafa6277
children 7571f5c89090
comparison
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6:2ffa8172dce1 7:096c6bbf4a04
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16 .. image:: https://img.shields.io/pypi/v/riboplot.svg 16 .. image:: https://img.shields.io/pypi/v/riboplot.svg
17 :target: https://pypi.python.org/pypi/riboplot 17 :target: https://pypi.python.org/pypi/riboplot
18 18
19 19
20 Plot read counts of RiboSeq data from BAM format alignment files 20 RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format).
21 21
22 * Free software: BSD license 22 There are two programs in the package:
23 * Documentation: https://riboplot.readthedocs.org.
24 23
25 Features 24 **riboplot**
26 -------- 25 Plot and output read counts (csv) for a single transcript.
27 26
28 * TODO 27 **ribocount**
28 Output read counts for all transcripts in an alignment.
29
30 For help on using these programs, please refer to :doc:`usage`.
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33 Free software: BSD license.
34
35 Documentation: https://riboplot.readthedocs.org.
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29 38
30 39
31 40
32 History 41 History
33 ------- 42 =======
34 43
35 0.1.0 (2015-08-05) 44 0.1.0 (2015-08-05)
36 --------------------- 45 ---------------------
37 46
38 * First release on PyPI. 47 * First release on PyPI.
48
39 Keywords: riboplot 49 Keywords: riboplot
40 Platform: UNKNOWN 50 Platform: UNKNOWN
41 Classifier: Development Status :: 2 - Pre-Alpha 51 Classifier: Development Status :: 2 - Pre-Alpha
42 Classifier: Intended Audience :: Developers 52 Classifier: Intended Audience :: Developers
43 Classifier: License :: OSI Approved :: BSD License 53 Classifier: License :: OSI Approved :: BSD License