comparison tool_dependencies.xml @ 1:1e9797878349

remove samtools requirement and use updated pysam
author Vimalkumar Velayudhan <vimal@biotechcoder.com>
date Mon, 29 Jun 2015 17:12:15 +0100
parents ca58e9466cbf
children 8a87a2c44d09
comparison
equal deleted inserted replaced
0:ca58e9466cbf 1:1e9797878349
3 <package name="matplotlib" version="1.2.1"> 3 <package name="matplotlib" version="1.2.1">
4 <repository changeset_revision="d22042e5e279" name="package_matplotlib_1_2" 4 <repository changeset_revision="d22042e5e279" name="package_matplotlib_1_2"
5 owner="ribogalaxy" prior_installation_required="True" 5 owner="ribogalaxy" prior_installation_required="True"
6 toolshed="http://toolshed.ribogalaxy.ucc.ie" /> 6 toolshed="http://toolshed.ribogalaxy.ucc.ie" />
7 </package> 7 </package>
8 <package name="pysam" version="0.7.7"> 8 <package name="pysam" version="0.8.3">
9 <repository changeset_revision="0e8f87bbc1e8" name="package_pysam_0_7_7" 9 <repository changeset_revision="190ad904a112" name="package_pysam_0_8_3"
10 owner="ribogalaxy" prior_installation_required="True"
11 toolshed="http://toolshed.ribogalaxy.ucc.ie" />
12 </package>
13 <package name="samtools" version="0.1.18">
14 <repository changeset_revision="4407d444b269" name="package_samtools_0_1_18"
15 owner="ribogalaxy" prior_installation_required="True" 10 owner="ribogalaxy" prior_installation_required="True"
16 toolshed="http://toolshed.ribogalaxy.ucc.ie" /> 11 toolshed="http://toolshed.ribogalaxy.ucc.ie" />
17 </package> 12 </package>
18 </tool_dependency> 13 </tool_dependency>