Mercurial > repos > vimalkumarvelayudhan > riboplot
view run_riboplot_sample.sh @ 12:61c47a1d6a7a
Add a test to check if a valid FASTA file is used (ribocount)
author | Vimalkumar Velayudhan <vimal@biotechcoder.com> |
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date | Wed, 19 Aug 2015 11:11:37 +0100 |
parents | 8e1efafa6277 |
children |
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#!/bin/bash python riboplot/riboplot.py -b tests/data/5hRPFsorted.bam \ -f tests/data/zebrafish.fna \ -t 'gi|148357119|ref|NM_001098396.1|' \ # -n tests/data/5hmRNAsorted.bam