view run_riboplot_sample.sh @ 12:61c47a1d6a7a

Add a test to check if a valid FASTA file is used (ribocount)
author Vimalkumar Velayudhan <vimal@biotechcoder.com>
date Wed, 19 Aug 2015 11:11:37 +0100
parents 8e1efafa6277
children
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#!/bin/bash
python riboplot/riboplot.py -b tests/data/5hRPFsorted.bam \
    -f tests/data/zebrafish.fna \
    -t 'gi|148357119|ref|NM_001098396.1|' \
#    -n tests/data/5hmRNAsorted.bam