Mercurial > repos > vimalkumarvelayudhan > riboplot
view tool_dependencies.xml @ 23:787ee2d925bb
Remove ez_setup from dependencies
author | Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com> |
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date | Mon, 31 Aug 2015 16:10:27 +0100 |
parents | 3429405e2ce1 |
children | 278d6aef2d7d |
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<?xml version="1.0"?> <tool_dependency> <package name="riboplot" version="0.1.0"> <install version="1.0"> <actions> <action type="download_by_url">https://pypi.python.org/packages/source/r/riboplot/riboplot-0.1.0.tar.gz</action> <action type="make_directory">$INSTALL_DIR/lib/python</action> <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action> <action type="set_environment"> <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> <environment_variable action="set_to" name="RIBOPLOT_PATH">$INSTALL_DIR</environment_variable> </action> </actions> </install> <readme> Requires installation of matplotlib 1.3.1 and pysam 0.8.3. RNA coverage requires bedtools installed. </readme> </package> </tool_dependency>