view data/ribocount_index.html @ 2:b6fd86c539ea

Fix pysam version in riboplot (was 0.7.7 instead of 0.8.3). Fix move sys import to the top in ribocount.py, riboplot.py. Minor: * Include an empty conditional when no RNA coverage is required. * Remove output directories after zip file is created.
author Vimalkumar Velayudhan <vimal@biotechcoder.com>
date Thu, 02 Jul 2015 11:53:59 +0100
parents ca58e9466cbf
children
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<!DOCTYPE html>
<html lang="en">
<head>

    <!-- Basic Page Needs
    –––––––––––––––––––––––––––––––––––––––––––––––––– -->
    <meta charset="utf-8">
    <title>Ribo-Seq profile counts</title>

    <!-- Mobile Specific Metas
    –––––––––––––––––––––––––––––––––––––––––––––––––– -->
    <meta name="viewport" content="width=device-width, initial-scale=1">
</head>
<body>

<h3>Ribocount output</h3>
<h5>The following zip file contains read counts as CSV files for <em>{count}</em>
transcripts with read length <em>{read_length}</em>.</h5>

<p>Download: <a href="ribocount_output.zip">ribocount_output.zip</a></p>

<p>Note: To view the list of transcripts and their read counts (in CSV),
extract the zip file and open "index.html" in a web browser. </p>
</body>
</html>