# HG changeset patch # User Vimalkumar Velayudhan # Date 1446199290 0 # Node ID 69f43f4144df70044aa47bb361dc3ef64f29940b # Parent b26c8f3b5aa65522a3d122bc23bb99eefddb8f77 Use latest version of riboplot from PyPI (0.2.2) diff -r b26c8f3b5aa6 -r 69f43f4144df ribocount.xml --- a/ribocount.xml Fri Oct 16 17:19:33 2015 +0100 +++ b/ribocount.xml Fri Oct 30 10:01:30 2015 +0000 @@ -2,7 +2,7 @@ Get read counts for all transcripts in an alignment (BAM) - riboplot + riboplot diff -r b26c8f3b5aa6 -r 69f43f4144df riboplot.xml --- a/riboplot.xml Fri Oct 16 17:19:33 2015 +0100 +++ b/riboplot.xml Fri Oct 30 10:01:30 2015 +0000 @@ -2,7 +2,7 @@ Plot and output read counts for a single transcript in an alignment (BAM) - riboplot + riboplot diff -r b26c8f3b5aa6 -r 69f43f4144df tool_dependencies.xml --- a/tool_dependencies.xml Fri Oct 16 17:19:33 2015 +0100 +++ b/tool_dependencies.xml Fri Oct 30 10:01:30 2015 +0000 @@ -1,16 +1,20 @@ - + - riboplot==0.2.1 + riboplot==0.2.2 $INSTALL_DIR/venv/bin - Note: RNA coverage requires bedtools installed. + Note: + + Matplotlib installation requires freetype headers and libraries installed (libfreetype6-dev on Ubuntu 14.04). + + RNA coverage requires bedtools installed.