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annotate run_unit_tests.sh @ 5:423ad61697c4

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Bugfix 1: [triplet] Lengths (frameCounting) if given should be a range (not zero). readingFrame function fails with subscript out of bounds. Bugfix 2: [triplet] Check if transcript name in SAM matches the name in FASTA. Produce an error message if it's not. This fixes the problem where an empty plot is produced (no bars). [ribosome_profile] - A proper error message is now produced if an invalid transcript name is provided. Updated test data
author Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com>
date Tue, 27 Oct 2015 12:21:50 +0000
parents 4419c2f77b60
children
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1
4419c2f77b60 Add script to run Python unit tests
Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
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1 #!/bin/bash
4419c2f77b60 Add script to run Python unit tests
Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
diff changeset
2 python -m unittest discover --verbose