Mercurial > repos > vimalkumarvelayudhan > riboseqr_wrapper

diff ribosome_profile.xml @ 3:d7ce95ccf54f

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Change R data file format in xml wrappers (rda -> RData) Add test data, sample workflow. Updated README with instructions on testing.
author Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com>
date Wed, 22 Jul 2015 12:07:39 +0100
parents c34c364ce75d
children
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--- a/ribosome_profile.xml	Tue Jul 21 15:40:22 2015 +0100
+++ b/ribosome_profile.xml	Wed Jul 22 12:07:39 2015 +0100
@@ -21,7 +21,7 @@
         --output_path "$html_file.files_path"
     </command>
     <inputs>
-        <param name="rdata_load" format="rda" type="data"
+        <param name="rdata_load" format="RData" type="data"
                label="Select Metagene analysis (R data file)"
                multiple="false">
             <validator type="expression"
@@ -59,7 +59,7 @@
     </outputs>
     <!--<tests>-->
         <!--<test>-->
-            <!--<param name="rdata_load" value="Metagene analysis (R data file)"/>-->
+            <!--<param name="rdata_load" value="Metagene analysis (R data file)" ftype="RData" />-->
             <!--<param name="transcript_name" value="CUFF.37930.1"/>-->
             <!--<param name="transcript_length" value="27"/>-->
             <!--<param name="transcript_cap" value="200"/>-->