Mercurial > repos > vipints > deseq_hts
diff deseq-hts_1.0/bin/start_interpreter.sh @ 9:e27b4f7811c2 draft
Updated DESeq version 1.12
| author | vipints <vipin@cbio.mskcc.org> |
|---|---|
| date | Tue, 08 Oct 2013 08:09:28 -0400 |
| parents | 94a108763d9e |
| children |
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--- a/deseq-hts_1.0/bin/start_interpreter.sh Wed Jun 27 15:38:39 2012 -0400 +++ b/deseq-hts_1.0/bin/start_interpreter.sh Tue Oct 08 08:09:28 2013 -0400 @@ -5,11 +5,11 @@ . `dirname $0`/deseq_config.sh -export MATLAB_RETURN_FILE=`tempfile` +export MATLAB_RETURN_FILE=`mktemp` if [ "$INTERPRETER" == 'octave' ]; then - echo exit | ${OCTAVE_BIN_PATH} --eval "global SHELL_INTERPRETER_INVOKE; SHELL_INTERPRETER_INVOKE=1; addpath $DESEQ_SRC_PATH; deseq_config; $1($2); exit;" || (echo starting Octave failed; rm -f $MATLAB_RETURN_FILE; exit -1) ; + echo exit | ${OCTAVE_BIN_PATH} --no-window-system --silent --eval "global SHELL_INTERPRETER_INVOKE; SHELL_INTERPRETER_INVOKE=1; addpath $DESEQ_SRC_PATH; deseq_config; $1($2); exit;" || (echo starting Octave failed; rm -f $MATLAB_RETURN_FILE; exit -1) ; fi if [ "$INTERPRETER" == 'matlab' ];