diff fml_gff_converter_programs/t/hs_2009.bed @ 0:ed53dca1c6ff

Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/fml_gff_converter_programs/t/hs_2009.bed	Tue Jun 07 17:26:20 2011 -0400
@@ -0,0 +1,58 @@
+chr1	11873	14409	uc001aaa.3	0	+	11873	11873	0	3	354,109,1189,	0,739,1347,
+chr1	11873	14409	uc010nxq.1	0	+	12189	13639	0	3	354,127,1007,	0,721,1529,
+chr1	11873	14409	uc010nxr.1	0	+	11873	11873	0	3	354,52,1189,	0,772,1347,
+chr1	14362	16765	uc009vis.2	0	-	14362	14362	0	4	467,69,147,159,	0,607,1433,2244,
+chr1	16857	17751	uc009vjc.1	0	-	16857	16857	0	2	198,519,	0,375,
+chr1	15795	18061	uc009vjd.2	0	-	15795	15795	0	5	152,159,198,136,456,	0,811,1062,1437,1810,
+chr1	14362	19759	uc009vit.2	0	-	14362	14362	0	9	467,69,152,159,198,510,147,99,847,	0,607,1433,2244,2495,2870,3552,3905,4550,
+chr1	14362	19759	uc001aae.3	0	-	14362	14362	0	10	467,69,152,159,198,136,137,147,99,847,	0,607,1433,2244,2495,2870,3243,3552,3905,4550,
+chr1	14362	19759	uc009viu.2	0	-	14362	14362	0	10	467,69,152,159,198,510,147,102,54,847,	0,607,1433,2244,2495,2870,3552,3905,4138,4550,
+chr1	16857	19759	uc001aai.1	0	-	16857	16857	0	6	198,136,137,147,112,847,	0,375,748,1057,1410,2055,
+chr1	14362	24901	uc001aab.3	0	-	14362	14362	0	10	467,69,152,159,202,136,137,147,112,164,	0,607,1433,2244,2491,2870,3243,3552,3905,10375,
+chr1	14362	29370	uc001aah.3	0	-	14362	14362	0	11	467,69,152,159,198,136,137,147,99,154,50,	0,607,1433,2244,2495,2870,3243,3552,3905,10375,14958,
+chr1	14362	29370	uc009vir.2	0	-	14362	14362	0	10	467,69,152,159,198,510,147,99,154,50,	0,607,1433,2244,2495,2870,3552,3905,10375,14958,
+chr1	14362	29370	uc009viq.2	0	-	14362	14362	0	7	467,152,159,198,456,154,50,	0,1433,2244,2495,3243,10375,14958,
+chr1	14362	29370	uc001aac.3	0	-	14362	14362	0	11	467,69,152,159,198,110,137,147,102,154,50,	0,607,1433,2244,2495,2896,3243,3552,3905,10375,14958,
+chr1	14406	29370	uc009viv.2	0	-	14406	14406	0	7	2359,198,136,137,147,154,50,	0,2451,2826,3199,3508,10331,14914,
+chr1	14406	29370	uc009viw.2	0	-	14406	14406	0	7	2359,198,510,147,99,154,50,	0,2451,2826,3508,3861,10331,14914,
+chr1	15602	29370	uc009vix.2	0	-	15602	15602	0	7	345,159,198,136,147,154,50,	0,1004,1255,1630,2312,9135,13718,
+chr1	16606	29370	uc009viz.2	0	-	16606	16606	0	8	159,202,136,137,147,112,154,50,	0,247,626,999,1308,1661,8131,12714,
+chr1	16606	29370	uc009viy.2	0	-	16606	16606	0	9	159,198,136,137,147,95,58,154,50,	0,251,626,999,1308,1661,1890,8131,12714,
+chr1	16857	29370	uc010nxs.1	0	-	16857	16857	0	8	198,136,137,147,99,227,154,50,	0,375,748,1057,1410,2055,7880,12463,
+chr1	17232	29370	uc009vje.2	0	-	17232	17232	0	4	510,147,99,50,	0,682,1035,12088,
+chr1	17605	29370	uc009vjf.2	0	-	17605	17605	0	7	137,147,95,58,227,154,50,	0,309,662,891,1307,7132,11715,
+chr1	16857	29961	uc009vjb.1	0	-	16857	16857	0	7	198,136,137,147,112,154,138,	0,375,748,1057,1410,7880,12966,
+chr1	34611	36081	uc001aak.2	0	-	34611	34611	0	3	563,205,361,	0,665,1109,
+chr1	69090	70008	uc001aal.1	0	+	69090	70008	0	1	918,	0,
+chr1	137838	139228	uc001aam.3	0	-	137838	137838	0	1	1390,	0,
+chr1	89294	237877	uc010nxt.1	0	-	89294	89294	0	2	1110,1263,	0,147320,
+chr1	321083	321114	uc001aaq.1	0	+	321083	321083	0	1	31,	0,
+chr1	321145	321223	uc001aar.1	0	+	321145	321145	0	1	78,	0,
+chr1	322036	326938	uc009vjk.2	0	+	324342	325605	0	3	192,58,2500,	0,2251,2402,
+chr1	323891	328580	uc001aav.3	0	+	323891	323891	0	4	169,58,2500,1545,	0,396,547,3144,
+chr1	323891	328580	uc001aau.2	0	+	324342	325605	0	3	169,58,4142,	0,396,547,
+chr1	367658	368595	uc010nxu.1	0	+	367658	368594	0	1	937,	0,
+chr1	420205	421839	uc001aax.1	0	+	420205	420205	0	3	91,267,444,	0,786,1190,
+chr1	566461	568045	uc001aaz.2	0	+	566461	566461	0	1	1584,	0,
+chr1	568148	568842	uc001aba.1	0	+	568148	568148	0	1	694,	0,
+chr1	568843	568912	uc001abb.2	0	+	568843	568843	0	1	69,	0,
+chr1	569326	570349	uc001abc.2	0	+	569326	569326	0	1	1023,	0,
+chr1	621097	622034	uc010nxv.1	0	-	621098	622034	0	1	937,	0,
+chr1	661139	665731	uc001abe.3	0	-	664484	665108	0	3	4045,58,169,	0,4138,4423,
+chr1	668401	668479	uc001abi.1	0	-	668401	668401	0	1	78,	0,
+chr1	668510	668541	uc001abj.2	0	-	668510	668510	0	1	31,	0,
+chr1	661139	670994	uc009vjm.2	0	-	664484	665108	0	3	4045,58,192,	0,7547,9663,
+chr1	671807	671885	uc010nxw.1	0	-	671807	671807	0	1	78,	0,
+chr1	671916	671947	uc001abl.2	0	-	671916	671916	0	1	31,	0,
+chr1	661139	679736	uc002khh.2	0	-	661139	661139	0	7	4045,58,191,233,58,65,162,	0,4138,6257,14043,14369,17526,18435,
+chr1	674239	679736	uc001abm.2	0	-	674239	674239	0	5	165,233,58,65,162,	0,943,1269,4426,5335,
+chr1	700236	714006	uc001abo.2	0	-	700236	700236	0	7	391,59,66,216,132,110,343,	0,1472,3691,4640,8119,9314,13427,
+chr1	761586	762902	uc010nxx.1	0	-	762079	762571	0	1	1316,	0,
+chr1	763063	788902	uc009vjn.1	0	+	763063	763063	0	4	92,102,184,132,	0,1319,24243,25707,
+chr1	763063	788997	uc001abp.1	0	+	763063	763063	0	6	92,102,153,184,96,227,	0,1319,19970,24243,24987,25707,
+chr1	763063	788997	uc001abq.1	0	+	763063	763063	0	5	92,102,184,96,227,	0,1319,24243,24987,25707,
+chr1	763063	788997	uc009vjo.1	0	+	763063	763063	0	4	92,102,96,227,	0,1319,24987,25707,
+chr1	763063	789740	uc001abr.1	0	+	763063	763063	0	7	92,102,153,184,96,132,784,	0,1319,19970,24243,24987,25707,25893,
+chr1	791897	794579	uc001abs.2	0	+	791897	791897	0	1	2682,	0,
+chr1	803452	812182	uc001abt.3	0	-	803452	803452	0	3	603,1044,57,	0,6039,8673,
+chr1	846814	850328	uc001abu.1	0	+	846814	846814	0	2	39,3004,	0,510,