# HG changeset patch # User vipints # Date 1307482164 14400 # Node ID 79726c328621f0eed8e913738ba66eda3dde3ff1 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository diff -r 000000000000 -r 79726c328621 fml_gff_groomer/README --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/README Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,57 @@ +A set of tools for pre-processing genome annotation in Generic Feature Format (GFF) + +INTRODUCTION + +Here I am distributing a customized bio-python scripts to give details about the GFF file +before you proceed with any analysis work. This programs allow you to get a better understanding +about your GFF file and do necessary grooming procedure to make them valid for better use. +Please follow the instructions below to clone these tools into your galaxy instance. + +CONTENTS + +galaxy: Contains tool configuration files in *.xml format. + + Tool configuration files. Please add right path to locate the scripts. + + gff_id_mapper.xml + + gff_available_limits.xml + + gff_loci_merge.xml + + +t: Test data set. (move to your galaxy root folder/test-data/) + + You may need to move the test files into your test-data directory so galaxy can find them. + If you want to run the functional tests eg as: + + sh run_functional_tests.sh -id fml_mergeloci + +scripts: Python based and Perl based scripts. + + gff_id_mapper.py : Provides feature to sub feature identifier mapping in a given GFF3 file () + + gff_available_limits.py : This tool provides an overview of available contig identifiers, sources and feature types and their corresponding counts from a given GFF file. + + gff_loci_merge.py : This tool merge the feature annotation of same loci. MergeLoci will be able to merge several transcripts from single loci to a main feature instead of several features. + +REQUIREMENTS + + Python + +COMMENTS/QUESTIONS + +I can be reached at vipin.ts@tuebingen.mpg.de + +LICENSE + +Copyright (C) 2010 Friedrich Miescher Laboratory of the Max Planck Society + +This program is free software; you can redistribute it and/or modify +it under the terms of the GNU General Public License as published by +the Free Software Foundation; either version 3 of the License, or +(at your option) any later version. + +COURTESY + +To the Galaxy Team. diff -r 000000000000 -r 79726c328621 fml_gff_groomer/galaxy/gff_available_limits.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/galaxy/gff_available_limits.xml Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,99 @@ + + gives an overview about GFF file content + + gff_available_limits.py + $gff_input + > $overview + + + + + + + + + + + + + + + +**What it does** + +This tool provides an overview of available contig identifiers, sources and feature types and their corresponding counts from a given GFF file. + +-------- + +**Example** + +- The features ID mapping in the following data in GFF format:: + + ##gff-version 3 + scaffold_1 JGI_Filtered gene 33131338 33131726 . - . ID=scaffold_105720.1;Name=scaffold_105720.1 + scaffold_1 JGI_Filtered mRNA 33131338 33131726 . - . ID=Transcript:924439;Name=Transcript:924439;Parent=scaffold_105720.1 + scaffold_1 JGI_Filtered three_prime_UTR 33131338 33131357 . - . ID=three_prime_UTR:924439;Parent=Transcript:924439 + scaffold_1 JGI_Filtered exon 33131338 33131654 . - . ID=exon:924439;Parent=Transcript:924439 + scaffold_1 JGI_Filtered CDS 33131358 33131654 . - 0 ID=CDS:924439;Parent=Transcript:924439;Name=scaffold_105720.1 + scaffold_1 JGI_Filtered exon 33131703 33131726 . - . ID=exon:924439;Parent=Transcript:924439 + scaffold_1 JGI_Filtered CDS 33131703 33131705 . - 0 ID=CDS:924439;Parent=Transcript:924439;Name=scaffold_105720.1 + scaffold_1 JGI_Filtered five_prime_UTR 33131706 33131726 . - . ID=five_prime_UTR:924439;Parent=Transcript:924439 + Chr4 TAIR9 gene 1180 1536 . - . ID=AT4G00005;Note=protein_coding_gene;Name=AT4G00005 + Chr4 TAIR9 mRNA 1180 1536 . - . ID=AT4G00005.1;Parent=AT4G00005;Name=AT4G00005.1;Index=1 + Chr4 TAIR9 protein 1180 1536 . - . ID=AT4G00005.1-Protein;Name=AT4G00005.1;Derives_from=AT4G00005.1 + Chr4 TAIR9 CDS 1180 1536 . - 0 Parent=AT4G00005.1,AT4G00005.1-Protein; + Chr4 TAIR9 exon 1180 1536 . - . Parent=AT4G00005.1 + +- Will be displayed as:: + + Chromosome identifier(s) and corresponding count: + Chr4 5 + scaffold_1 8 + + Source(s) of feature and corresponding count: + JGI_Filtered 8 + TAIR9 5 + + Feature type(s) and corresponding count: + gene 2 + mRNA 2 + five_prime_UTR 1 + three_prime_UTR 1 + exon 3 + CDS 3 + protein 1 + + Unique combination of Feature type(s), Source(s) and corresponding count: + JGI_Filtered, CDS 2 + JGI_Filtered, exon 2 + JGI_Filtered, five_prime_UTR 1 + JGI_Filtered, gene 1 + JGI_Filtered, mRNA 1 + JGI_Filtered, three_prime_UTR 1 + TAIR9, CDS 1 + TAIR9, exon 1 + TAIR9, protein 1 + TAIR9, mRNA 1 + TAIR9, gene 1 + +-------- + +**About formats** + +**GFF3 format** General Feature Format is a format for describing genes and other features associated with DNA, RNA and Protein sequences. GFF3 lines have nine tab-separated fields: + + 1. seqid - Must be a chromosome or scaffold. + 2. source - The program that generated this feature. + 3. type - The name of this type of feature. Some examples of standard feature types are "gene", "CDS", "protein", "mRNA", and "exon". + 4. start - The starting position of the feature in the sequence. The first base is numbered 1. + 5. stop - The ending position of the feature (inclusive). + 6. score - A score between 0 and 1000. If there is no score value, enter ".". + 7. strand - Valid entries include '+', '-', or '.' (for don't know/care). + 8. phase - If the feature is a coding exon, frame should be a number between 0-2 that represents the reading frame of the first base. If the feature is not a coding exon, the value should be '.'. + 9. attributes - All lines with the same group are linked together into a single item. + +-------- + +This tool is a part of the **MLB Group at Friedrich Miescher Laboratory of the Max Planck Society**. Copyright (C) 2010 Vipin T. Sreedharan (vipin.ts@tuebingen.mpg.de) + + diff -r 000000000000 -r 79726c328621 fml_gff_groomer/galaxy/gff_id_mapper.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/galaxy/gff_id_mapper.xml Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,75 @@ + + Parent-Child relation in GFF file + + gff_id_mapper.py + $gff_input + > $idmapping + + + + + + + + + + + + + + + + + + + +**What it does** + +This tool provides the features(gene, mRNA, UTR's, exon, CDS etc) relationship based on their identifier mapping in a given GFF file. + +-------- + +**Example** + +- The features ID mapping in the following data in GFF format:: + + ##gff-version 3 + 17 protein_coding gene 7255208 7258258 . + . ID=ENSG00000213859;Name=KCTD11 + 17 protein_coding mRNA 7255208 7258258 . + . ID=ENST00000333751;Name=KCTD11-001;Parent=ENSG00000213859 + 17 protein_coding five_prime_UTR 7255208 7256261 . + . Parent=ENST00000333751 + 17 protein_coding CDS 7256262 7256960 . + 0 Name=CDS:KCTD11;Parent=ENST00000333751,ENSP00000328352 + 17 protein_coding three_prime_UTR 7256961 7258258 . + . Parent=ENST00000333751 + 17 protein_coding exon 7255208 7258258 . + . Parent=ENST00000333751 + +- Will be displayed as:: + + FIRST level feature(s): + ('protein_coding', 'gene') + + SECOND level feature(s): + ('protein_coding', 'mRNA') + + THIRD level feature(s): + ('protein_coding', 'CDS'), ('protein_coding', 'exon'), ('protein_coding', 'five_prime_UTR'), ('protein_coding', 'three_prime_UTR') + +-------- + +**About formats** + +**GFF3 format** General Feature Format is a format for describing genes and other features associated with DNA, RNA and Protein sequences. GFF3 lines have nine tab-separated fields: + +1. seqid - Must be a chromosome or scaffold. +2. source - The program that generated this feature. +3. type - The name of this type of feature. Some examples of standard feature types are "gene", "CDS", "protein", "mRNA", and "exon". +4. start - The starting position of the feature in the sequence. The first base is numbered 1. +5. stop - The ending position of the feature (inclusive). +6. score - A score between 0 and 1000. If there is no score value, enter ".". +7. strand - Valid entries include '+', '-', or '.' (for don't know/care). +8. phase - If the feature is a coding exon, frame should be a number between 0-2 that represents the reading frame of the first base. If the feature is not a coding exon, the value should be '.'. +9. attributes - All lines with the same group are linked together into a single item. + +-------- + +This tool is a part of the **MLB Group at Friedrich Miescher Laboratory of the Max Planck Society**. Copyright (C) 2010 Vipin T. Sreedharan (vipin.ts@tuebingen.mpg.de) + + diff -r 000000000000 -r 79726c328621 fml_gff_groomer/galaxy/gff_loci_merge.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/galaxy/gff_loci_merge.xml Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,114 @@ + + Merge feature annotation from same loci + + gff_loci_merge.py + $gff_input + $gff_result + > $logfile + + + + + + + + + + + + + + + + + +**What it does** + +This tool merge the feature annotation of same loci. MergeLoci will be able to merge several transcripts from single loci to a main feature instead of several features. For example, in UCSC genome annotation files the alternative splice model of the transcript are represented as individual gene models. + +-------- + +**Example** + +- data in GFF3 format:: + + ##gff-version 3 + chr19 hg19_knownGene gene 44764033 44779468 . + . ID=Gene:uc002oyy.1;Name=Gene:uc002oyy.1 + chr19 hg19_knownGene mRNA 44764033 44779468 . + . ID=Transcript:uc002oyy.1;Parent=Gene:uc002oyy.1 + chr19 hg19_knownGene protein 44777369 44778826 . + . ID=Protein:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44764033 44764091 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44768467 44768528 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44777052 44777368 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene CDS 44777369 44778826 . + 0 Name=CDS:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene three_prime_UTR 44778827 44779468 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44764033 44764091 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44768467 44768528 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44777052 44779468 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene gene 44770351 44779468 . + . ID=Gene:uc002oyy.1;Name=Gene:uc002oyy.1 + chr19 hg19_knownGene mRNA 44770351 44779468 . + . ID=Transcript:uc002oyy.1;Parent=Gene:uc002oyy.1 + chr19 hg19_knownGene protein 44777052 44778826 . + . ID=Protein:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene CDS 44777052 44777368 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene CDS 44777489 44778826 . + 0 Name=CDS:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene three_prime_UTR 44778827 44779468 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44777052 44777368 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44777489 44779468 . + . Parent=Transcript:uc002oyy.1 + +- Will be merged as:: + + ##gff-version 3 + chr19 hg19_knownGene gene 44764033 44779468 . + . ID=Gene_hg19_chr19_00001;Name=Gene_hg19_chr19_0001 + chr19 hg19_knownGene mRNA 44764033 44779468 . + . ID=Transcript:uc002oyy.1;Parent=Gene_hg19_chr19_0001 + chr19 hg19_knownGene protein 44777369 44778826 . + . ID=Protein:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44764033 44764091 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44768467 44768528 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44777052 44777368 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene CDS 44777369 44778826 . + 0 Name=CDS:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene three_prime_UTR 44778827 44779468 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44764033 44764091 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44768467 44768528 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44777052 44779468 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene mRNA 44770351 44779468 . + . ID=Transcript:uc002oyy.1;Gene_hg19_chr19_0001 + chr19 hg19_knownGene protein 44777052 44778826 . + . ID=Protein:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene five_prime_UTR 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene CDS 44777052 44777368 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene CDS 44777489 44778826 . + 0 Name=CDS:uc002oyy.1;Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene three_prime_UTR 44778827 44779468 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44770351 44770477 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44771019 44771297 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44777052 44777368 . + . Parent=Transcript:uc002oyy.1 + chr19 hg19_knownGene exon 44777489 44779468 . + . Parent=Transcript:uc002oyy.1 + +-------- + +**About formats** + +**GFF3 format** General Feature Format is a format for describing genes and other features associated with DNA, RNA and Protein sequences. GFF3 lines have nine tab-separated fields: + + 1. seqid - Must be a chromosome or scaffold. + 2. source - The program that generated this feature. + 3. type - The name of this type of feature. Some examples of standard feature types are "gene", "CDS", "protein", "mRNA", and "exon". + 4. start - The starting position of the feature in the sequence. The first base is numbered 1. + 5. stop - The ending position of the feature (inclusive). + 6. score - A score between 0 and 1000. If there is no score value, enter ".". + 7. strand - Valid entries include '+', '-', or '.' (for don't know/care). + 8. phase - If the feature is a coding exon, frame should be a number between 0-2 that represents the reading frame of the first base. If the feature is not a coding exon, the value should be '.'. + 9. attributes - All lines with the same group are linked together into a single item. + +-------- + +This tool is a part of the **MLB Group at Friedrich Miescher Laboratory of the Max Planck Society**. Copyright (C) 2010 Vipin T. Sreedharan (vipin.ts@tuebingen.mpg.de) + + diff -r 000000000000 -r 79726c328621 fml_gff_groomer/scripts/gff_available_limits.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/scripts/gff_available_limits.py Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,79 @@ +#!/usr/bin/env python +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; either version 3 of the License, or +# (at your option) any later version. +# +# Written (W) 2010 Vipin T Sreedharan, Friedrich Miescher Laboratory of the Max Planck Society +# Copyright (C) 2010 Max Planck Society +# +# Description : Provide available source, feature types from a GFF file + +import re, sys +import time +import collections + +def available_limits(gff_handle): + """Figure out the available feature types from the given GFF file""" + + filter_info = dict(gff_id = [0], gff_source_type = [1, 2], + gff_source = [1], gff_type = [2]) + cur_limits = dict() + for filter_key in filter_info.keys(): + cur_limits[filter_key] = collections.defaultdict(int) + for line in gff_handle: + if line.strip('\n\r')[0] != "#": + parts = [p.strip() for p in line.split('\t')] + if len(parts) == 1 and re.search(r'\w+', parts[0]):continue ## GFF files with FASTA sequence together + assert len(parts) == 9, line + for filter_key, cur_indexes in filter_info.items(): + cur_id = tuple([parts[i] for i in cur_indexes]) + cur_limits[filter_key][cur_id] += 1 + # get rid of the default dicts + final_dict = dict() + for key, value_dict in cur_limits.items(): + if len(key) == 1: + key = key[0] + final_dict[key] = dict(value_dict) + + return final_dict + +if __name__=='__main__': + + stime = time.asctime( time.localtime(time.time()) ) + print '-------------------------------------------------------' + print 'FeatureScan started on ' + stime + print '-------------------------------------------------------' + + try: + gff_handle = open(sys.argv[1], 'rU') + except: + sys.stderr.write("Can't open the GFF3 file, terminating...\n") + sys.stderr.write("USAGE: gff_available_limits.py \n") + sys.exit(-1) + final_dict = available_limits(gff_handle) + gff_handle.close() + print + print "==Overview of available source(s) and feature type(s) from GFF file==" + print + print "Chromosome identifier(s) and corresponding count:" + for contig, cnt in sorted(final_dict['gff_id'].items()): + print '\t' + str(contig[0]) + '\t' + str(cnt) + print + print "Source(s) of feature and corresponding count:" + for source, cnt in sorted(final_dict['gff_source'].items()): + print '\t' + str(source[0]) + '\t' + str(cnt) + print + print "Feature type(s) and corresponding count:" + for ftype, cnt in sorted(final_dict['gff_type'].items()): + print '\t' + str(cnt) + '\t' + str(ftype[0]) + print + print "Unique combination of Feature type(s), Source(s) and corresponding count:" + for sftype, cnt in sorted(final_dict['gff_source_type'].items()): + print '\t' + str(cnt) + '\t' + str(sftype[0]) + ', '+ str(sftype[1]) + print + stime = time.asctime( time.localtime(time.time()) ) + print '-------------------------------------------------------' + print 'FeatureScan finished at ' + stime + print '-------------------------------------------------------' diff -r 000000000000 -r 79726c328621 fml_gff_groomer/scripts/gff_id_mapper.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/scripts/gff_id_mapper.py Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,254 @@ +#!/usr/bin/env python +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; either version 3 of the License, or +# (at your option) any later version. +# +# Written (W) 2010 Vipin T Sreedharan, Friedrich Miescher Laboratory of the Max Planck Society +# Copyright (C) 2010 Max Planck Society +# + +# Description : Provides feature to sub feature identifier mapping in a given GFF3 file. + +import re, sys +import collections +import urllib +import time + +def _gff_line_map(line): + """Parses a line of GFF into a dictionary. + Given an input line from a GFF file, this: + - breaks it into component elements + - determines the type of attribute (flat, parent, child or annotation) + - generates a dictionary of GFF info + """ + gff3_kw_pat = re.compile("\w+=") + def _split_keyvals(keyval_str): + """Split key-value pairs in a GFF2, GTF and GFF3 compatible way. + + GFF3 has key value pairs like: + count=9;gene=amx-2;sequence=SAGE:aacggagccg + GFF2 and GTF have: + Sequence "Y74C9A" ; Note "Clone Y74C9A; Genbank AC024206" + name "fgenesh1_pg.C_chr_1000003"; transcriptId 869 + """ + quals = collections.defaultdict(list) + if keyval_str is None: + return quals + # ensembl GTF has a stray semi-colon at the end + if keyval_str[-1] == ';': + keyval_str = keyval_str[:-1] + # GFF2/GTF has a semi-colon with at least one space after it. + # It can have spaces on both sides; wormbase does this. + # GFF3 works with no spaces. + # Split at the first one we can recognize as working + parts = keyval_str.split(" ; ") + if len(parts) == 1: + parts = keyval_str.split("; ") + if len(parts) == 1: + parts = keyval_str.split(";") + # check if we have GFF3 style key-vals (with =) + is_gff2 = True + if gff3_kw_pat.match(parts[0]): + is_gff2 = False + key_vals = [p.split('=') for p in parts] + # otherwise, we are separated by a space with a key as the first item + else: + pieces = [] + for p in parts: + # fix misplaced semi-colons in keys in some GFF2 files + if p and p[0] == ';': + p = p[1:] + pieces.append(p.strip().split(" ")) + key_vals = [(p[0], " ".join(p[1:])) for p in pieces] + for key, val in key_vals: + # remove quotes in GFF2 files + if (len(val) > 0 and val[0] == '"' and val[-1] == '"'): + val = val[1:-1] + if val: + quals[key].extend(val.split(',')) + # if we don't have a value, make this a key=True/False style + # attribute + else: + quals[key].append('true') + for key, vals in quals.items(): + quals[key] = [urllib.unquote(v) for v in vals] + return quals, is_gff2 + + def _nest_gff2_features(gff_parts): + """Provide nesting of GFF2 transcript parts with transcript IDs. + + exons and coding sequences are mapped to a parent with a transcript_id + in GFF2. This is implemented differently at different genome centers + and this function attempts to resolve that and map things to the GFF3 + way of doing them. + """ + # map protein or transcript ids to a parent + for transcript_id in ["transcript_id", "transcriptId", "proteinId"]: + try: + gff_parts["quals"]["Parent"] = \ + gff_parts["quals"][transcript_id] + break + except KeyError: + pass + # case for WormBase GFF -- everything labelled as Transcript or CDS + for flat_name in ["Transcript", "CDS"]: + if gff_parts["quals"].has_key(flat_name): + # parent types + if gff_parts["type"] in [flat_name]: + if not gff_parts["id"]: + gff_parts["id"] = gff_parts["quals"][flat_name][0] + gff_parts["quals"]["ID"] = [gff_parts["id"]] + # children types + elif gff_parts["type"] in ["intron", "exon", "three_prime_UTR", + "coding_exon", "five_prime_UTR", "CDS", "stop_codon", + "start_codon"]: + gff_parts["quals"]["Parent"] = gff_parts["quals"][flat_name] + break + + return gff_parts + + line = line.strip() + if line == '':return [('directive', line)] # sometimes the blank lines will be there + if line[0] == '>':return [('directive', '')] # sometimes it will be a FATSA header + if line[0] == "#": + return [('directive', line[2:])] + elif line: + parts = line.split('\t') + if len(parts) == 1 and re.search(r'\w+', parts[0]):return [('directive', '')] ## GFF files with FASTA sequence together + assert len(parts) == 9, line + gff_parts = [(None if p == '.' else p) for p in parts] + gff_info = dict() + + # collect all of the base qualifiers for this item + quals, is_gff2 = _split_keyvals(gff_parts[8]) + + gff_info["is_gff2"] = is_gff2 + + if gff_parts[1]:quals["source"].append(gff_parts[1]) + gff_info['quals'] = dict(quals) + + # if we are describing a location, then we are a feature + if gff_parts[3] and gff_parts[4]: + gff_info['type'] = gff_parts[2] + gff_info['id'] = quals.get('ID', [''])[0] + + if is_gff2:gff_info = _nest_gff2_features(gff_info) + # features that have parents need to link so we can pick up + # the relationship + if gff_info['quals'].has_key('Parent'): + final_key = 'child' + elif gff_info['id']: + final_key = 'parent' + # Handle flat features + else: + final_key = 'feature' + # otherwise, associate these annotations with the full record + else: + final_key = 'annotation' + return [(final_key, gff_info)] + +def parent_child_id_map(gff_handle): + """Provide a mapping of parent to child relationships in the file. + + Gives a dictionary of parent child relationships: + + keys -- tuple of (source, type) for each parent + values -- tuple of (source, type) as children of that parent""" + + # collect all of the parent and child types mapped to IDs + parent_sts = dict() + child_sts = collections.defaultdict(list) + + for line in gff_handle: + line_type, line_info = _gff_line_map(line)[0] + if (line_type == 'parent' or (line_type == 'child' and line_info['id'])): + parent_sts[line_info['id']] = (line_info['quals']['source'][0], line_info['type']) + if line_type == 'child': + for parent_id in line_info['quals']['Parent']: + child_sts[parent_id].append((line_info['quals']['source'][0], line_info['type'])) + gff_handle.close() + + # generate a dictionary of the unique final type relationships + pc_map = collections.defaultdict(list) + for parent_id, parent_type in parent_sts.items(): + for child_type in child_sts[parent_id]: + pc_map[parent_type].append(child_type) + pc_final_map = dict() + for ptype, ctypes in pc_map.items(): + unique_ctypes = list(set(ctypes)) + unique_ctypes.sort() + pc_final_map[ptype] = unique_ctypes + + # Check for Parent Child relations + level1, level2, level3, sec_level_mis = {}, {}, {}, {} + for etype, fchild in pc_final_map.items(): + level2_flag = 0 + for kp, vp in pc_final_map.items(): + if etype in vp:level2_flag = 1; level2[etype] = 1 # check for second level features + if level2_flag == 0: # first level features + level1[etype] =1 + for eachfch in fchild: # perform a check for all level1 objects values were defined as level2 keys. + if not eachfch in pc_final_map.keys(): # figure out the missing level2 objects + if etype in sec_level_mis: + sec_level_mis[etype].append(eachfch) + else: + sec_level_mis[etype]=[eachfch] + if level2_flag == 1:level3[str(fchild)] =1 # taking third level features + # disply the result + if level1==level2==level3=={} and sec_level_mis == {}: + print + print 'ONLY FIRST level feature(s):' + source_type = dict() + gff_handle = open(gff_handle.name, 'rU') + for line in gff_handle: + line = line.strip('\n\r') + if line[0] == '#': continue + parts = line.split('\t') + if parts[-1] == '':parts.pop() + assert len(parts) == 9, line + source_type[(parts[1], parts[2])] = 1 + gff_handle.close() + for ele in source_type:print '\t' + str(ele) + print + else: + print + print '===Report on different level features from GFF file===' + print + print 'FIRST level feature(s):' + for ele in level1: print '\t' + str(ele) + print + print 'SECOND level feature(s):' + for ele in level2: print '\t' + str(ele) + print + print 'THIRD level feature(s):' + for ele in level3:print '\t' + str(ele[1:-1]) + print + # wrong way mapped feature mapping description + for wf, wfv in sec_level_mis.items(): + if wf[1]=='gene': + print 'GFF Parsing modules from publicly available packages like Bio-python, Bio-perl etc. are heavily dependent on feature identifier mapping.' + print 'Here few features seems to be wrongly mapped to its child, which inturn cause problems while extracting the annotation based on feature identifier.\n' + for ehv in wfv: + if ehv[1]=='exon' or ehv[1]=='intron' or ehv[1]=='CDS' or ehv[1]=='three_prime_UTR' or ehv[1]=='five_prime_UTR':print 'Error in ID mapping: Level1 feature ' + str(wf) + ' maps to Level3 feature ' + str(ehv) + +if __name__=='__main__': + + stime = time.asctime( time.localtime(time.time()) ) + print '-------------------------------------------------------' + print 'GFFExamine started on ' + stime + print '-------------------------------------------------------' + + try: + gff_handle = open(sys.argv[1], 'rU') + except: + sys.stderr.write("Can't open the GFF3 file, Cannot continue...\n") + sys.stderr.write("USAGE: gff_id_mapper.py \n") + sys.exit(-1) + parent_child_id_map(gff_handle) + + stime = time.asctime( time.localtime(time.time()) ) + print '-------------------------------------------------------' + print 'GFFExamine finished at ' + stime + print '-------------------------------------------------------' diff -r 000000000000 -r 79726c328621 fml_gff_groomer/scripts/gff_loci_merge.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/scripts/gff_loci_merge.py Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,300 @@ +#!/usr/bin/env python +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation; either version 3 of the License, or +# (at your option) any later version. +# +# Written (W) 2010 Vipin T Sreedharan, Friedrich Miescher Laboratory of the Max Planck Society +# Copyright (C) 2010 Friedrich Miescher Laboratory of the Max Planck Society +# +# Description : to merge same transcripts in single loci and define as an alternative spliced form for the gene. + +def display_content(final_dict): + """displaying the summary from GFF file""" + + print "\tUnique combination of Source(s), Feature type(s) and corresponding count:" + for sftype, cnt in sorted(final_dict['gff_source_type'].items()): + if sftype[1] == 'gene':print '\t' + str(cnt) + '\t' + str(sftype[0]) + ', '+ str(sftype[1]) + +def available_limits(gff_file): + """Figure out the available feature types from the given GFF file""" + + gff_handle = open(gff_file, 'rU') + filter_info = dict(gff_id = [0], gff_source_type = [1, 2], + gff_source = [1], gff_type = [2]) + cur_limits = dict() + for filter_key in filter_info.keys(): + cur_limits[filter_key] = collections.defaultdict(int) + for line in gff_handle: + if line.strip('\n\r')[0] != "#": + parts = [p.strip() for p in line.split('\t')] + if len(parts) == 1 and re.search(r'\w+', parts[0]):continue ## GFF files with FASTA sequence together + assert len(parts) == 9, line + for filter_key, cur_indexes in filter_info.items(): + cur_id = tuple([parts[i] for i in cur_indexes]) + cur_limits[filter_key][cur_id] += 1 + # get rid of the default dicts + gff_handle.close() + final_dict = dict() + for key, value_dict in cur_limits.items(): + if len(key) == 1:key = key[0] + final_dict[key] = dict(value_dict) + return final_dict + +def GFFWriter(merged_info, genes, transcripts, exons, utr5, cds, utr3, out_file): + """Write GFF3 file with merged feature description""" + + out_fh = open(out_file, 'w') + for ginfo, regions in merged_info.items(): + gene_cnt = 1 + for interval, features in sorted(regions.items()):# master gene feature + out_fh.write(ginfo[0] + '\t' + ginfo[1] + '\tgene\t' + str(interval[0]) + '\t' + str(interval[1]) + '\t.\t' + ginfo[2] + '\t.\tID=Gene_' + ginfo[0] + '_' + str(gene_cnt).zfill(5) + ';Name=Gene_' + ginfo[0] + '_' + str(gene_cnt).zfill(5) + '\n') + for geneid in features:# corresponding transcript info + if geneid in transcripts: + for tinfo in transcripts[geneid]:# transcript feature line + out_fh.write(ginfo[0] + '\t' + ginfo[1] + '\t' + tinfo['type'] + '\t' + str(tinfo['start']) + '\t' + str(tinfo['stop']) + '\t.\t' + ginfo[2] + '\t.\tID=' + tinfo['ID']+ ';Parent=Gene_' + ginfo[0] + '_' + str(gene_cnt).zfill(5) + '\n') + if tinfo['ID'] in utr5:# check for 5 prime UTR + for u5info in utr5[tinfo['ID']]:out_fh.write(ginfo[0] + '\t' + ginfo[1] + '\tfive_prime_UTR\t' + str(u5info['start']) + '\t' + str(u5info['stop']) + '\t.\t' + ginfo[2] + '\t.\tParent=' + tinfo['ID'] + '\n') + if tinfo['ID'] in cds:# check for CDS + for cdsinfo in cds[tinfo['ID']]:out_fh.write(ginfo[0] + '\t' + ginfo[1] + '\tCDS\t' + str(cdsinfo['start']) + '\t' + str(cdsinfo['stop']) + '\t.\t' + ginfo[2] + '\t.\tParent=' + tinfo['ID'] + '\n') + if tinfo['ID'] in utr3:# check for 3 prime UTR + for u3info in utr3[tinfo['ID']]:out_fh.write(ginfo[0] + '\t' + ginfo[1] + '\tthree_prime_UTR\t' + str(u3info['start']) + '\t' + str(u3info['stop']) + '\t.\t' + ginfo[2] + '\t.\tParent=' + tinfo['ID'] + '\n') + if tinfo['ID'] in exons:# check for exons + for exinfo in exons[tinfo['ID']]:out_fh.write(ginfo[0] + '\t' + ginfo[1] + '\texon\t' + str(exinfo['start']) + '\t' + str(exinfo['stop']) + '\t.\t' + ginfo[2] + '\t.\tParent=' + tinfo['ID'] + '\n') + gene_cnt += 1 + out_fh.close() + +def UniqLoci(genes, transcripts, exons): + """determine unique location where features annotated multiple times""" + + uniq_loci = dict() + for gid, parts in genes.items(): + gene_info = (parts['chr'], parts['source'], parts['strand']) + if gene_info in uniq_loci:## same contig, orientation, source: look for merging transcripts based on the nearby location + if (int(parts['start']), int(parts['stop'])) in uniq_loci[gene_info].keys(): ## similar transcripts will catch here (start and stop are same may be exon, CDS or intron content may vary) + uniq_loci[gene_info][(int(parts['start']), int(parts['stop']))].append(gid) + else: # heuristic approach to include closely related region on a single master loci. + got_a_range = 0 + for floc in uniq_loci[gene_info].keys():# look whether it lies closely to any intervel which is already defined + if (floc[1]-parts['start']) < 150 or (parts['stop']-floc[0]) < 150:continue ## TODO boundary spanning length in same orientation for genes of each species will be great. + if floc[0] <= parts['start'] and parts['start'] < floc[1]: # the start of the new candidate is inside of any of the already defined interval ? + non_coding = 0 + try: # check for small transcript whether they belong to a existing one or a new non-coding candidate. + if len(transcripts[gid]) == 1: + if len(exons[transcripts[gid][0]['ID']]) == 1:non_coding = 1 + if non_coding == 0: + if parts['stop'] > floc[1]:# making global gene coordinate from individual transcript model + entries = uniq_loci[gene_info][floc] + del uniq_loci[gene_info][floc] # remove the existing interval, here we got a longer downstream position from the candidate + entries.append(gid) + uniq_loci[gene_info][(floc[0], parts['stop'])] = entries + else: + uniq_loci[gene_info][floc].append(gid) + else:# create a new interval for non-coding type entry + uniq_loci[gene_info][(parts['start'], parts['stop'])] = [gid] + got_a_range = 1 + break + except: # dont have any transcripts or exons defined. + break + elif floc[0] < parts['stop'] and parts['stop'] <= floc[1]: # the stop of the new candidate is inside of any of the pre-defined interval ? the candidate seems to be from more upstream + non_coding = 0 + try: + if len(transcripts[gid]) == 1: + if len(exons[transcripts[gid][0]['ID']]) == 1:non_coding = 1 + if non_coding == 0: + entries = uniq_loci[gene_info][floc] + del uniq_loci[gene_info][floc] # remove the existing interval, here we got a upstream position from which the candidate transcribing + entries.append(gid) + uniq_loci[gene_info][(int(parts['start']), floc[1])] = entries + else: # create a new interval for non-coding type entry + uniq_loci[gene_info][(parts['start'], parts['stop'])] = [gid] + got_a_range = 1 + break + except: + break + elif floc[0] > parts['start'] and floc[1] < parts['stop']: # whether the whole feature floc region (--) resides in the candidate location (----------) ? + non_coding = 0 # here the candidate seems to be longer than the pre-defined interval, check all entries from the pre-defined interval whether it is a small region, any chance as non-coding. + try: + for features in uniq_loci[gene_info][floc]: + if len(transcripts[features]) == 1: + if len(exons[transcripts[features][0]['ID']]) == 1:non_coding = 1 + if non_coding == 1: # create a new interval for non coding + uniq_loci[gene_info][(parts['start'], parts['stop'])] = [gid] + else: # append the existing transcript cluster, here change the interval position based on the candidate location + entries = uniq_loci[gene_info][floc] + del uniq_loci[gene_info][floc] # remove the existing interval, here we got a longer upstream and downstream region. + entries.append(gid) + uniq_loci[gene_info][(parts['start'], parts['stop'])] = entries + got_a_range = 1 + break + except: + break + ## or create a new interval ?? + if got_a_range == 0:uniq_loci[gene_info][(parts['start'], parts['stop'])] = [gid] + else: + uniq_loci[gene_info] = {(int(parts['start']), int(parts['stop'])): [gid]} + + return uniq_loci + +def ParseGFF(gff_file): + """feature extraction from provided GFF file""" + + gff_handle = open(gff_file, 'rU') + genes, transcripts, exons, utr5, cds, utr3 = dict(), dict(), dict(), dict(), dict(), dict() + for gff_line in gff_handle: + parts = gff_line.strip('\n\r').split('\t') + if gff_line[0] == '#' or gff_line[0] == '>':continue + if len(parts) == 1:continue ## Some centers in the world create GFF files with FASTA sequence together + if len(parts) != 9:sys.stdout.write('Warning: Found invalid GFF line\n' + gff_line.strip('\n\r') + '\n');continue + if parts[3] == '' or parts[4] == '':sys.stdout.write('Warning: Found missing coordinate in GFF line\n' + gff_line.strip('\n\r') + '\n');continue + if parts[2] == 'gene': + gene_info = dict() + gene_info['start'] = int(parts[3]) + gene_info['stop'] = int(parts[4]) + gene_info['chr'] = parts[0] + gene_info['source'] = parts[1] + gene_info['strand'] = parts[6] + gid = '' + for attr in parts[-1].split(';'): + if attr == '':continue ## GFF line may end with a ';' symbol + attr = attr.split('=') + if attr[0] == 'ID':gid=attr[1];continue + gene_info[attr[0]] = attr[1] + if gid != '': genes[gid] = gene_info + if parts[2] == 'mRNA' or parts[2] == 'transcript' or parts[2] == 'ncRNA' or parts[2] == 'tRNA' or parts[2] == 'snRNA' or parts[2] == 'scRNA' or parts[2] == 'snoRNA' or parts[2] == 'snlRNA' or parts[2] == 'rRNA' or parts[2] == 'miRNA': + mrna_info = dict() + mrna_info['start'] = int(parts[3]) + mrna_info['stop'] = int(parts[4]) + mrna_info['chr'] = parts[0] + mrna_info['strand'] = parts[6] + mrna_info['type'] = parts[2] + gid = '' + for attr in parts[-1].split(';'): + if attr == '':continue ## GFF line may end with a ';' symbol + attr = attr.split('=') + if attr[0] == 'Parent':gid=attr[1];continue + mrna_info[attr[0]] = attr[1] + if gid in transcripts: + transcripts[gid].append(mrna_info) + else: + transcripts[gid] = [mrna_info] + if parts[2] == 'exon': + exon_info = dict() + exon_info['start'] = int(parts[3]) + exon_info['stop'] = int(parts[4]) + exon_info['chr'] = parts[0] + exon_info['strand'] = parts[6] + tid = '' + for attr in parts[-1].split(';'): + if attr == '':continue ## GFF line may end with a ';' symbol + attr = attr.split('=') + if attr[0] == 'Parent':tid=attr[1];continue + exon_info[attr[0]] = attr[1] + if tid in exons: + exons[tid].append(exon_info) + else: + exons[tid] = [exon_info] + if parts[2] == 'five_prime_UTR': + utr5_info = dict() + utr5_info['start'] = int(parts[3]) + utr5_info['stop'] = int(parts[4]) + utr5_info['chr'] = parts[0] + utr5_info['strand'] = parts[6] + tid = '' + for attr in parts[-1].split(';'): + if attr == '':continue ## GFF line may end with a ';' symbol + attr = attr.split('=') + if attr[0] == 'Parent':tid=attr[1];continue + utr5_info[attr[0]] = attr[1] + if tid in utr5: + utr5[tid].append(utr5_info) + else: + utr5[tid] = [utr5_info] + if parts[2] == 'CDS': + cds_info = dict() + cds_info['start'] = int(parts[3]) + cds_info['stop'] = int(parts[4]) + cds_info['chr'] = parts[0] + cds_info['strand'] = parts[6] + tid = '' + for attr in parts[-1].split(';'): + if attr == '':continue + attr = attr.split('=') + if attr[0] == 'Parent':tid=attr[1];continue + cds_info[attr[0]] = attr[1] + if tid in cds: + cds[tid].append(cds_info) + else: + cds[tid] = [cds_info] + if parts[2] == 'three_prime_UTR': + utr3_info = dict() + utr3_info['start'] = int(parts[3]) + utr3_info['stop'] = int(parts[4]) + utr3_info['chr'] = parts[0] + utr3_info['strand'] = parts[6] + tid = '' + for attr in parts[-1].split(';'): + if attr == '':continue + attr = attr.split('=') + if attr[0] == 'Parent':tid=attr[1];continue + utr3_info[attr[0]] = attr[1] + if tid in utr3: + utr3[tid].append(utr3_info) + else: + utr3[tid] = [utr3_info] + gff_handle.close() + return genes, transcripts, exons, utr5, cds, utr3 + +import re, sys +import time +import collections + +if __name__=='__main__': + + stime = time.asctime( time.localtime(time.time()) ) + print '-------------------------------------------------------' + print 'MergeLoci started on ' + stime + print '-------------------------------------------------------' + try: + gff_file = sys.argv[1] + out_file = sys.argv[2] + except: + sys.stderr.write("Missing GFF3 file, result file. terminating...\n") + sys.stderr.write("USAGE: gff_loci_merge.py \n") + sys.exit(-1) + print '--------' + print 'Level: 1- ' + 'Reading GFF file: ' + re.sub(r'/home/galaxy/galaxy-2.1.2009', r'GALAXYDIR', gff_file) + print '--------' + print '--------' + print 'Level: 2- ' + 'BEFORE processing, Merging feature distribution in GFF file' + print '--------' + # initial feature distribution in file + final_dict = available_limits(gff_file) + display_content(final_dict) + # determine the whole content from GFF file + genes, transcripts, exons, utr5, cds, utr3 = ParseGFF(gff_file) + print '--------' + print 'Level: 3- ' + 'Start merging feature(s) from similar locations...' + print '--------' + # determine the same gene loci on specific chromosome based on the same source + merged_regions = UniqLoci(genes, transcripts, exons) + print '\tDone.' + print '--------' + print 'Level: 4- ' + 'Writing merged feature annotation to GFF format...' + print '--------' + # write new GFF file with merged loci information for gene feature + GFFWriter(merged_regions, genes, transcripts, exons, utr5, cds, utr3, out_file) + print '\tDone.' + # after processing display the feature distribution in the result file + print '--------' + print 'Level: 5- ' + 'Merged feature(s) summary from GFF file' + print '--------' + final_dict = available_limits(out_file) + display_content(final_dict) + print + print '\tMerged result file: ' + re.sub(r'/home/galaxy/galaxy-2.1.2009', r'GALAXYDIR', out_file) + stime = time.asctime( time.localtime(time.time()) ) + print '-------------------------------------------------------' + print 'MergeLoci finished at ' + stime + print '-------------------------------------------------------' diff -r 000000000000 -r 79726c328621 fml_gff_groomer/t/Aly_JGI.gff3 --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/t/Aly_JGI.gff3 Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,3996 @@ +##gff-version 3 +##sequence-region scaffold_1 1 33132539 +scaffold_1 Genomic_canonical region 1 33132539 . + . ID=scaffold_1;Name=scaffold_1 +scaffold_1 JGI_Filtered gene 47 2523 . - . ID=scaffold_100001.1;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered mRNA 47 2523 . - . ID=Transcript:918720;Name=Transcript:918720;Parent=scaffold_100001.1 +scaffold_1 JGI_Filtered three_prime_UTR 47 66 . - . ID=three_prime_UTR:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered exon 47 252 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 67 252 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 407 782 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 407 782 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 1423 1642 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 1423 1642 . - 1 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 1803 2035 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 1803 2035 . - 2 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 2124 2347 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 2124 2347 . - 1 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 2444 2523 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 2444 2503 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered five_prime_UTR 2504 2523 . - . ID=five_prime_UTR:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered gene 3311 6198 . - . ID=fgenesh2_kg.1__2__AT1G02190.2;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered mRNA 3311 6198 . - . ID=Transcript:470048;Name=Transcript:470048;Parent=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered three_prime_UTR 3311 3490 . - . ID=three_prime_UTR:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered three_prime_UTR 3513 3528 . - . ID=three_prime_UTR:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered exon 3311 3490 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered exon 3513 3708 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 3529 3708 . - 0 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered exon 3810 4082 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 3810 4082 . - 0 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered exon 4164 4364 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 4164 4364 . - 0 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered exon 4483 4590 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 4483 4590 . - 0 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered exon 4730 4736 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 4730 4736 . - 0 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered exon 4851 5228 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 4851 5228 . - 1 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered exon 5319 5538 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 5319 5538 . - 1 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered exon 5631 6198 . - . ID=exon:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered CDS 5631 6123 . - 2 ID=CDS:470048;Parent=Transcript:470048;Name=fgenesh2_kg.1__2__AT1G02190.2 +scaffold_1 JGI_Filtered five_prime_UTR 6124 6198 . - . ID=five_prime_UTR:470048;Parent=Transcript:470048 +scaffold_1 JGI_Filtered gene 7429 7630 . + . ID=scaffold_100003.1;Name=scaffold_100003.1 +scaffold_1 JGI_Filtered mRNA 7429 7630 . + . ID=Transcript:918722;Name=Transcript:918722;Parent=scaffold_100003.1 +scaffold_1 JGI_Filtered five_prime_UTR 7429 7448 . + . ID=five_prime_UTR:918722;Parent=Transcript:918722 +scaffold_1 JGI_Filtered exon 7429 7630 . + . ID=exon:918722;Parent=Transcript:918722 +scaffold_1 JGI_Filtered CDS 7449 7610 . + 0 ID=CDS:918722;Parent=Transcript:918722;Name=scaffold_100003.1 +scaffold_1 JGI_Filtered three_prime_UTR 7611 7630 . + . ID=three_prime_UTR:918722;Parent=Transcript:918722 +scaffold_1 JGI_Filtered gene 9512 10567 . + . ID=fgenesh2_kg.1__3__AT1G02180.1;Name=fgenesh2_kg.1__3__AT1G02180.1 +scaffold_1 JGI_Filtered mRNA 9512 10567 . + . ID=Transcript:470049;Name=Transcript:470049;Parent=fgenesh2_kg.1__3__AT1G02180.1 +scaffold_1 JGI_Filtered five_prime_UTR 9512 9564 . + . ID=five_prime_UTR:470049;Parent=Transcript:470049 +scaffold_1 JGI_Filtered exon 9512 9564 . + . ID=exon:470049;Parent=Transcript:470049 +scaffold_1 JGI_Filtered exon 9576 9657 . + . ID=exon:470049;Parent=Transcript:470049 +scaffold_1 JGI_Filtered CDS 9576 9657 . + 0 ID=CDS:470049;Parent=Transcript:470049;Name=fgenesh2_kg.1__3__AT1G02180.1 +scaffold_1 JGI_Filtered exon 9873 10567 . + . ID=exon:470049;Parent=Transcript:470049 +scaffold_1 JGI_Filtered CDS 9873 10471 . + 1 ID=CDS:470049;Parent=Transcript:470049;Name=fgenesh2_kg.1__3__AT1G02180.1 +scaffold_1 JGI_Filtered three_prime_UTR 10472 10567 . + . ID=three_prime_UTR:470049;Parent=Transcript:470049 +scaffold_1 JGI_Filtered gene 10652 11944 . - . ID=Al_scaffold_0001_4;Name=Al_scaffold_0001_4 +scaffold_1 JGI_Filtered mRNA 10652 11944 . - . ID=Transcript:909750;Name=Transcript:909750;Parent=Al_scaffold_0001_4 +scaffold_1 JGI_Filtered exon 10652 10711 . - . ID=exon:909750;Parent=Transcript:909750 +scaffold_1 JGI_Filtered CDS 10652 10711 . - 0 ID=CDS:909750;Parent=Transcript:909750;Name=Al_scaffold_0001_4 +scaffold_1 JGI_Filtered exon 10782 11006 . - . ID=exon:909750;Parent=Transcript:909750 +scaffold_1 JGI_Filtered CDS 10782 11006 . - 0 ID=CDS:909750;Parent=Transcript:909750;Name=Al_scaffold_0001_4 +scaffold_1 JGI_Filtered exon 11044 11202 . - . ID=exon:909750;Parent=Transcript:909750 +scaffold_1 JGI_Filtered CDS 11044 11202 . - 0 ID=CDS:909750;Parent=Transcript:909750;Name=Al_scaffold_0001_4 +scaffold_1 JGI_Filtered exon 11260 11619 . - . ID=exon:909750;Parent=Transcript:909750 +scaffold_1 JGI_Filtered CDS 11260 11619 . - 0 ID=CDS:909750;Parent=Transcript:909750;Name=Al_scaffold_0001_4 +scaffold_1 JGI_Filtered exon 11813 11944 . - . ID=exon:909750;Parent=Transcript:909750 +scaffold_1 JGI_Filtered CDS 11813 11944 . - 0 ID=CDS:909750;Parent=Transcript:909750;Name=Al_scaffold_0001_4 +scaffold_1 JGI_Filtered gene 12552 13416 . - . ID=fgenesh2_kg.1__5__AT1G02160.2;Name=fgenesh2_kg.1__5__AT1G02160.2 +scaffold_1 JGI_Filtered mRNA 12552 13416 . - . ID=Transcript:470051;Name=Transcript:470051;Parent=fgenesh2_kg.1__5__AT1G02160.2 +scaffold_1 JGI_Filtered three_prime_UTR 12552 12738 . - . ID=three_prime_UTR:470051;Parent=Transcript:470051 +scaffold_1 JGI_Filtered exon 12552 12843 . - . ID=exon:470051;Parent=Transcript:470051 +scaffold_1 JGI_Filtered CDS 12739 12843 . - 0 ID=CDS:470051;Parent=Transcript:470051;Name=fgenesh2_kg.1__5__AT1G02160.2 +scaffold_1 JGI_Filtered exon 12873 12949 . - . ID=exon:470051;Parent=Transcript:470051 +scaffold_1 JGI_Filtered CDS 12873 12949 . - 0 ID=CDS:470051;Parent=Transcript:470051;Name=fgenesh2_kg.1__5__AT1G02160.2 +scaffold_1 JGI_Filtered exon 13267 13382 . - . ID=exon:470051;Parent=Transcript:470051 +scaffold_1 JGI_Filtered CDS 13267 13357 . - 2 ID=CDS:470051;Parent=Transcript:470051;Name=fgenesh2_kg.1__5__AT1G02160.2 +scaffold_1 JGI_Filtered exon 13395 13416 . - . ID=exon:470051;Parent=Transcript:470051 +scaffold_1 JGI_Filtered five_prime_UTR 13358 13382 . - . ID=five_prime_UTR:470051;Parent=Transcript:470051 +scaffold_1 JGI_Filtered five_prime_UTR 13395 13416 . - . ID=five_prime_UTR:470051;Parent=Transcript:470051 +scaffold_1 JGI_Filtered gene 13702 15386 . - . ID=scaffold_100007.1;Name=scaffold_100007.1 +scaffold_1 JGI_Filtered mRNA 13702 15386 . - . ID=Transcript:918726;Name=Transcript:918726;Parent=scaffold_100007.1 +scaffold_1 JGI_Filtered three_prime_UTR 13702 13721 . - . ID=three_prime_UTR:918726;Parent=Transcript:918726 +scaffold_1 JGI_Filtered exon 13702 14936 . - . ID=exon:918726;Parent=Transcript:918726 +scaffold_1 JGI_Filtered CDS 13722 14936 . - 0 ID=CDS:918726;Parent=Transcript:918726;Name=scaffold_100007.1 +scaffold_1 JGI_Filtered exon 15007 15386 . - . ID=exon:918726;Parent=Transcript:918726 +scaffold_1 JGI_Filtered CDS 15007 15363 . - 0 ID=CDS:918726;Parent=Transcript:918726;Name=scaffold_100007.1 +scaffold_1 JGI_Filtered five_prime_UTR 15364 15386 . - . ID=five_prime_UTR:918726;Parent=Transcript:918726 +scaffold_1 JGI_Filtered gene 15665 19464 . - . ID=scaffold_100008.1;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered mRNA 15665 19464 . - . ID=Transcript:918727;Name=Transcript:918727;Parent=scaffold_100008.1 +scaffold_1 JGI_Filtered three_prime_UTR 15665 15762 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 15841 15934 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 16032 16097 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 16343 16442 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 16652 16734 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 16813 16881 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 17048 17115 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 17206 17292 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 17403 17474 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 17676 17779 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 17884 17947 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 18062 18133 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered three_prime_UTR 18246 18304 . - . ID=three_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered exon 15665 15762 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered exon 15841 15934 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 15841 15934 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 16032 16097 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 16032 16097 . - 1 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 16343 16442 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 16343 16442 . - 1 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 16652 16734 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 16652 16734 . - 2 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 16813 16881 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 16813 16881 . - 1 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 17048 17115 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 17048 17115 . - 1 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 17206 17292 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 17206 17292 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 17403 17474 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 17403 17474 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 17676 17779 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 17676 17779 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 17884 17947 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 17884 17947 . - 2 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 18062 18133 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 18062 18133 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 18246 18304 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 18246 18304 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 18425 18542 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 18425 18542 . - 2 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered CDS 18425 15762 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 18687 18742 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 18687 18742 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 18847 18933 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 18847 18933 . - 2 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 19010 19055 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 19010 19055 . - 2 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 19143 19184 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 19143 19184 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 19254 19339 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 19254 19339 . - 0 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered exon 19419 19464 . - . ID=exon:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered CDS 19419 19443 . - 2 ID=CDS:918727;Parent=Transcript:918727;Name=scaffold_100008.1 +scaffold_1 JGI_Filtered five_prime_UTR 19444 19464 . - . ID=five_prime_UTR:918727;Parent=Transcript:918727 +scaffold_1 JGI_Filtered gene 19692 20609 . + . ID=scaffold_100009.1;Name=scaffold_100009.1 +scaffold_1 JGI_Filtered mRNA 19692 20609 . + . ID=Transcript:918728;Name=Transcript:918728;Parent=scaffold_100009.1 +scaffold_1 JGI_Filtered five_prime_UTR 19692 19713 . + . ID=five_prime_UTR:918728;Parent=Transcript:918728 +scaffold_1 JGI_Filtered exon 19692 19929 . + . ID=exon:918728;Parent=Transcript:918728 +scaffold_1 JGI_Filtered CDS 19714 19929 . + 0 ID=CDS:918728;Parent=Transcript:918728;Name=scaffold_100009.1 +scaffold_1 JGI_Filtered exon 20214 20390 . + . ID=exon:918728;Parent=Transcript:918728 +scaffold_1 JGI_Filtered CDS 20214 20390 . + 0 ID=CDS:918728;Parent=Transcript:918728;Name=scaffold_100009.1 +scaffold_1 JGI_Filtered exon 20530 20609 . + . ID=exon:918728;Parent=Transcript:918728 +scaffold_1 JGI_Filtered CDS 20530 20589 . + 0 ID=CDS:918728;Parent=Transcript:918728;Name=scaffold_100009.1 +scaffold_1 JGI_Filtered three_prime_UTR 20590 20609 . + . ID=three_prime_UTR:918728;Parent=Transcript:918728 +scaffold_1 JGI_Filtered gene 24515 27497 . + . ID=scaffold_100010.1;Name=scaffold_100010.1 +scaffold_1 JGI_Filtered mRNA 24515 27497 . + . ID=Transcript:918729;Name=Transcript:918729;Parent=scaffold_100010.1 +scaffold_1 JGI_Filtered five_prime_UTR 24515 24534 . + . ID=five_prime_UTR:918729;Parent=Transcript:918729 +scaffold_1 JGI_Filtered exon 24515 24573 . + . ID=exon:918729;Parent=Transcript:918729 +scaffold_1 JGI_Filtered CDS 24535 24573 . + 0 ID=CDS:918729;Parent=Transcript:918729;Name=scaffold_100010.1 +scaffold_1 JGI_Filtered exon 25305 25373 . + . ID=exon:918729;Parent=Transcript:918729 +scaffold_1 JGI_Filtered CDS 25305 25373 . + 0 ID=CDS:918729;Parent=Transcript:918729;Name=scaffold_100010.1 +scaffold_1 JGI_Filtered exon 25525 25626 . + . ID=exon:918729;Parent=Transcript:918729 +scaffold_1 JGI_Filtered CDS 25525 25626 . + 0 ID=CDS:918729;Parent=Transcript:918729;Name=scaffold_100010.1 +scaffold_1 JGI_Filtered exon 27337 27497 . + . ID=exon:918729;Parent=Transcript:918729 +scaffold_1 JGI_Filtered CDS 27337 27477 . + 0 ID=CDS:918729;Parent=Transcript:918729;Name=scaffold_100010.1 +scaffold_1 JGI_Filtered three_prime_UTR 27478 27497 . + . ID=three_prime_UTR:918729;Parent=Transcript:918729 +scaffold_1 JGI_Filtered gene 29681 31614 . + . ID=fgenesh1_pm.C_scaffold_1000009;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered mRNA 29681 31614 . + . ID=Transcript:311229;Name=Transcript:311229;Parent=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 29681 29746 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 29681 29746 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 29864 29938 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 29864 29938 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 30016 30117 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 30016 30117 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 30232 30274 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 30232 30274 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 30444 30448 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 30444 30448 . + 1 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 30605 30685 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 30605 30685 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 30775 30870 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 30775 30870 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 31131 31241 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 31131 31241 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 31325 31407 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 31325 31407 . + 0 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered exon 31488 31614 . + . ID=exon:311229;Parent=Transcript:311229 +scaffold_1 JGI_Filtered CDS 31488 31614 . + 2 ID=CDS:311229;Parent=Transcript:311229;Name=fgenesh1_pm.C_scaffold_1000009 +scaffold_1 JGI_Filtered gene 33055 34772 . + . ID=scaffold_100013.1;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered mRNA 33055 34772 . + . ID=Transcript:918732;Name=Transcript:918732;Parent=scaffold_100013.1 +scaffold_1 JGI_Filtered five_prime_UTR 33055 33079 . + . ID=five_prime_UTR:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered exon 33055 33093 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 33080 33093 . + 0 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered exon 33218 33290 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 33218 33290 . + 2 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered exon 33385 33432 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 33385 33432 . + 0 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered exon 33510 33557 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 33510 33557 . + 0 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered exon 33769 33840 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 33769 33840 . + 0 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered exon 33930 34085 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 33930 34085 . + 0 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered exon 34198 34301 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 34198 34301 . + 0 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered exon 34656 34772 . + . ID=exon:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered CDS 34656 34752 . + 2 ID=CDS:918732;Parent=Transcript:918732;Name=scaffold_100013.1 +scaffold_1 JGI_Filtered three_prime_UTR 34753 34772 . + . ID=three_prime_UTR:918732;Parent=Transcript:918732 +scaffold_1 JGI_Filtered gene 35461 39593 . - . ID=fgenesh2_kg.1__12__AT1G02120.1;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered mRNA 35461 39593 . - . ID=Transcript:470058;Name=Transcript:470058;Parent=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered three_prime_UTR 35461 35846 . - . ID=three_prime_UTR:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered three_prime_UTR 35937 36148 . - . ID=three_prime_UTR:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered three_prime_UTR 36221 36263 . - . ID=three_prime_UTR:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered three_prime_UTR 36365 36426 . - . ID=three_prime_UTR:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered three_prime_UTR 36616 36715 . - . ID=three_prime_UTR:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered three_prime_UTR 36804 36870 . - . ID=three_prime_UTR:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered exon 35461 35846 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered exon 35937 36148 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 35937 36148 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 36221 36263 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 36221 36263 . - 2 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 36365 36426 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 36365 36426 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 36616 36715 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 36616 36715 . - 2 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 36804 36870 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 36804 36870 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 36984 37038 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 36984 37038 . - 1 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered CDS 36984 35846 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 37128 37214 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 37128 37214 . - 2 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 37325 37412 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 37325 37412 . - 2 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 37548 37588 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 37548 37588 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 38196 38353 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 38196 38353 . - 2 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 38431 38501 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 38431 38501 . - 1 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 38608 38724 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 38608 38724 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 38807 38902 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 38807 38902 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 38984 39049 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 38984 39049 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 39134 39184 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 39134 39184 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 39266 39325 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 39266 39325 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered exon 39408 39593 . - . ID=exon:470058;Parent=Transcript:470058 +scaffold_1 JGI_Filtered CDS 39408 39593 . - 0 ID=CDS:470058;Parent=Transcript:470058;Name=fgenesh2_kg.1__12__AT1G02120.1 +scaffold_1 JGI_Filtered gene 39949 42531 . - . ID=fgenesh2_kg.1__13__AT1G02110.1;Name=fgenesh2_kg.1__13__AT1G02110.1 +scaffold_1 JGI_Filtered mRNA 39949 42531 . - . ID=Transcript:470059;Name=Transcript:470059;Parent=fgenesh2_kg.1__13__AT1G02110.1 +scaffold_1 JGI_Filtered three_prime_UTR 39949 39962 . - . ID=three_prime_UTR:470059;Parent=Transcript:470059 +scaffold_1 JGI_Filtered exon 39949 40725 . - . ID=exon:470059;Parent=Transcript:470059 +scaffold_1 JGI_Filtered CDS 39963 40725 . - 0 ID=CDS:470059;Parent=Transcript:470059;Name=fgenesh2_kg.1__13__AT1G02110.1 +scaffold_1 JGI_Filtered exon 41017 41098 . - . ID=exon:470059;Parent=Transcript:470059 +scaffold_1 JGI_Filtered CDS 41017 41098 . - 1 ID=CDS:470059;Parent=Transcript:470059;Name=fgenesh2_kg.1__13__AT1G02110.1 +scaffold_1 JGI_Filtered exon 41171 41240 . - . ID=exon:470059;Parent=Transcript:470059 +scaffold_1 JGI_Filtered CDS 41171 41240 . - 2 ID=CDS:470059;Parent=Transcript:470059;Name=fgenesh2_kg.1__13__AT1G02110.1 +scaffold_1 JGI_Filtered exon 41321 41508 . - . ID=exon:470059;Parent=Transcript:470059 +scaffold_1 JGI_Filtered CDS 41321 41508 . - 0 ID=CDS:470059;Parent=Transcript:470059;Name=fgenesh2_kg.1__13__AT1G02110.1 +scaffold_1 JGI_Filtered exon 41607 42531 . - . ID=exon:470059;Parent=Transcript:470059 +scaffold_1 JGI_Filtered CDS 41607 42531 . - 2 ID=CDS:470059;Parent=Transcript:470059;Name=fgenesh2_kg.1__13__AT1G02110.1 +scaffold_1 JGI_Filtered gene 43130 46178 . - . ID=scaffold_100016.1;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered mRNA 43130 46178 . - . ID=Transcript:918735;Name=Transcript:918735;Parent=scaffold_100016.1 +scaffold_1 JGI_Filtered three_prime_UTR 43130 43149 . - . ID=three_prime_UTR:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered exon 43130 43227 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 43150 43227 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 43362 43400 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 43362 43400 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 43624 43675 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 43624 43675 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 43934 43998 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 43934 43998 . - 1 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 44429 44512 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 44429 44512 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 44710 44757 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 44710 44757 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 44863 44983 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 44863 44983 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 45138 45240 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 45138 45240 . - 1 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 45424 45505 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 45424 45505 . - 2 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 45588 45635 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 45588 45635 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 45716 45843 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 45716 45843 . - 0 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 45912 46000 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 45912 46000 . - 2 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered exon 46090 46178 . - . ID=exon:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered CDS 46090 46157 . - 1 ID=CDS:918735;Parent=Transcript:918735;Name=scaffold_100016.1 +scaffold_1 JGI_Filtered five_prime_UTR 46158 46178 . - . ID=five_prime_UTR:918735;Parent=Transcript:918735 +scaffold_1 JGI_Filtered gene 46396 48761 . + . ID=fgenesh2_kg.1__19__AT1G02090.1;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered mRNA 46396 48761 . + . ID=Transcript:470065;Name=Transcript:470065;Parent=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered five_prime_UTR 46396 46400 . + . ID=five_prime_UTR:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered exon 46396 46559 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 46401 46559 . + 0 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 46693 46768 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 46693 46768 . + 0 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 46850 46938 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 46850 46938 . + 1 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 47037 47126 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 47037 47126 . + 0 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 47246 47290 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 47246 47290 . + 0 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 47387 47456 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 47387 47456 . + 0 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 47663 47802 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 47663 47802 . + 1 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 48405 48493 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 48405 48493 . + 0 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered exon 48590 48761 . + . ID=exon:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered CDS 48590 48614 . + 2 ID=CDS:470065;Parent=Transcript:470065;Name=fgenesh2_kg.1__19__AT1G02090.1 +scaffold_1 JGI_Filtered three_prime_UTR 48615 48761 . + . ID=three_prime_UTR:470065;Parent=Transcript:470065 +scaffold_1 JGI_Filtered gene 48875 49123 . + . ID=Al_scaffold_0001_16;Name=Al_scaffold_0001_16 +scaffold_1 JGI_Filtered mRNA 48875 49123 . + . ID=Transcript:909762;Name=Transcript:909762;Parent=Al_scaffold_0001_16 +scaffold_1 JGI_Filtered exon 48875 49123 . + . ID=exon:909762;Parent=Transcript:909762 +scaffold_1 JGI_Filtered CDS 48875 49123 . + 0 ID=CDS:909762;Parent=Transcript:909762;Name=Al_scaffold_0001_16 +scaffold_1 JGI_Filtered gene 49553 51020 . - . ID=scaffold_100018.1;Name=scaffold_100018.1 +scaffold_1 JGI_Filtered mRNA 49553 51020 . - . ID=Transcript:918737;Name=Transcript:918737;Parent=scaffold_100018.1 +scaffold_1 JGI_Filtered three_prime_UTR 49553 49573 . - . ID=three_prime_UTR:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered exon 49553 49927 . - . ID=exon:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered CDS 49574 49927 . - 0 ID=CDS:918737;Parent=Transcript:918737;Name=scaffold_100018.1 +scaffold_1 JGI_Filtered exon 50024 50113 . - . ID=exon:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered CDS 50024 50113 . - 0 ID=CDS:918737;Parent=Transcript:918737;Name=scaffold_100018.1 +scaffold_1 JGI_Filtered exon 50214 50296 . - . ID=exon:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered CDS 50214 50296 . - 0 ID=CDS:918737;Parent=Transcript:918737;Name=scaffold_100018.1 +scaffold_1 JGI_Filtered exon 50385 50478 . - . ID=exon:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered CDS 50385 50478 . - 2 ID=CDS:918737;Parent=Transcript:918737;Name=scaffold_100018.1 +scaffold_1 JGI_Filtered exon 50556 50678 . - . ID=exon:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered CDS 50556 50678 . - 0 ID=CDS:918737;Parent=Transcript:918737;Name=scaffold_100018.1 +scaffold_1 JGI_Filtered exon 50755 51020 . - . ID=exon:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered CDS 50755 51000 . - 0 ID=CDS:918737;Parent=Transcript:918737;Name=scaffold_100018.1 +scaffold_1 JGI_Filtered five_prime_UTR 51001 51020 . - . ID=five_prime_UTR:918737;Parent=Transcript:918737 +scaffold_1 JGI_Filtered gene 51526 52636 . - . ID=fgenesh1_pm.C_scaffold_1000016;Name=fgenesh1_pm.C_scaffold_1000016 +scaffold_1 JGI_Filtered mRNA 51526 52636 . - . ID=Transcript:311236;Name=Transcript:311236;Parent=fgenesh1_pm.C_scaffold_1000016 +scaffold_1 JGI_Filtered exon 51526 51831 . - . ID=exon:311236;Parent=Transcript:311236 +scaffold_1 JGI_Filtered CDS 51526 51831 . - 0 ID=CDS:311236;Parent=Transcript:311236;Name=fgenesh1_pm.C_scaffold_1000016 +scaffold_1 JGI_Filtered exon 51872 52100 . - . ID=exon:311236;Parent=Transcript:311236 +scaffold_1 JGI_Filtered CDS 51872 52100 . - 0 ID=CDS:311236;Parent=Transcript:311236;Name=fgenesh1_pm.C_scaffold_1000016 +scaffold_1 JGI_Filtered exon 52133 52449 . - . ID=exon:311236;Parent=Transcript:311236 +scaffold_1 JGI_Filtered CDS 52133 52449 . - 1 ID=CDS:311236;Parent=Transcript:311236;Name=fgenesh1_pm.C_scaffold_1000016 +scaffold_1 JGI_Filtered exon 52484 52636 . - . ID=exon:311236;Parent=Transcript:311236 +scaffold_1 JGI_Filtered CDS 52484 52636 . - 0 ID=CDS:311236;Parent=Transcript:311236;Name=fgenesh1_pm.C_scaffold_1000016 +scaffold_1 JGI_Filtered gene 55814 56468 . - . ID=fgenesh2_kg.1__20__AT1G02070.1;Name=fgenesh2_kg.1__20__AT1G02070.1 +scaffold_1 JGI_Filtered mRNA 55814 56468 . - . ID=Transcript:470066;Name=Transcript:470066;Parent=fgenesh2_kg.1__20__AT1G02070.1 +scaffold_1 JGI_Filtered three_prime_UTR 55814 55884 . - . ID=three_prime_UTR:470066;Parent=Transcript:470066 +scaffold_1 JGI_Filtered three_prime_UTR 55899 55972 . - . ID=three_prime_UTR:470066;Parent=Transcript:470066 +scaffold_1 JGI_Filtered exon 55814 55884 . - . ID=exon:470066;Parent=Transcript:470066 +scaffold_1 JGI_Filtered exon 55899 56282 . - . ID=exon:470066;Parent=Transcript:470066 +scaffold_1 JGI_Filtered CDS 55973 56282 . - 0 ID=CDS:470066;Parent=Transcript:470066;Name=fgenesh2_kg.1__20__AT1G02070.1 +scaffold_1 JGI_Filtered exon 56377 56468 . - . ID=exon:470066;Parent=Transcript:470066 +scaffold_1 JGI_Filtered CDS 56377 56465 . - 1 ID=CDS:470066;Parent=Transcript:470066;Name=fgenesh2_kg.1__20__AT1G02070.1 +scaffold_1 JGI_Filtered five_prime_UTR 56466 56468 . - . ID=five_prime_UTR:470066;Parent=Transcript:470066 +scaffold_1 JGI_Filtered gene 57579 57871 . + . ID=scaffold_100022.1;Name=scaffold_100022.1 +scaffold_1 JGI_Filtered mRNA 57579 57871 . + . ID=Transcript:918741;Name=Transcript:918741;Parent=scaffold_100022.1 +scaffold_1 JGI_Filtered five_prime_UTR 57579 57598 . + . ID=five_prime_UTR:918741;Parent=Transcript:918741 +scaffold_1 JGI_Filtered exon 57579 57871 . + . ID=exon:918741;Parent=Transcript:918741 +scaffold_1 JGI_Filtered CDS 57599 57850 . + 0 ID=CDS:918741;Parent=Transcript:918741;Name=scaffold_100022.1 +scaffold_1 JGI_Filtered three_prime_UTR 57851 57871 . + . ID=three_prime_UTR:918741;Parent=Transcript:918741 +scaffold_1 JGI_Filtered gene 58865 72177 . + . ID=scaffold_100023.1;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered mRNA 58865 72177 . + . ID=Transcript:918742;Name=Transcript:918742;Parent=scaffold_100023.1 +scaffold_1 JGI_Filtered five_prime_UTR 58865 58884 . + . ID=five_prime_UTR:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered exon 58865 58977 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 58885 58977 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 59074 59371 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 59074 59371 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 59449 59677 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 59449 59677 . + 1 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 59769 60108 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 59769 60108 . + 2 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 60300 60413 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 60300 60413 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 60500 60628 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 60500 60628 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 60703 60894 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 60703 60894 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 60984 61178 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 60984 61178 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 61307 61444 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 61307 61444 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 61536 61658 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 61536 61658 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 61742 61995 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 61742 61995 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 62097 62200 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 62097 62200 . + 2 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 62436 62530 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 62436 62530 . + 1 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 62618 62842 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 62618 62842 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 63182 63343 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 63182 63343 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 63428 63500 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 63428 63500 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 63611 63678 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 63611 63678 . + 1 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 63814 63959 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 63814 63959 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 64070 64178 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 64070 64178 . + 2 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 64271 64417 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 64271 64417 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 64509 64556 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 64509 64556 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 64631 64759 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 64631 64759 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 64881 65123 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 64881 65123 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 65239 65376 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 65239 65376 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 65462 65547 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 65462 65547 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 65643 65748 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 65643 65748 . + 2 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 65992 66087 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 65992 66087 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 66245 66397 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 66245 66397 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 66552 66734 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 66552 66734 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 66810 67039 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 66810 67039 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 67135 67237 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 67135 67237 . + 2 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 67321 67446 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 67321 67446 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 67532 67576 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 67532 67576 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 67751 67945 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 67751 67945 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 68204 68330 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 68204 68330 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 68433 68533 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 68433 68533 . + 1 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 68829 68963 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 68829 68963 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 69040 69123 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 69040 69123 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 69540 69686 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 69540 69686 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 69775 69906 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 69775 69906 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 70016 70063 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 70016 70063 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 70158 70304 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 70158 70304 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 70372 70433 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 70372 70433 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 70632 70785 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 70632 70785 . + 2 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 70890 71081 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 70890 71081 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 71171 71275 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 71171 71275 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 71368 71502 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 71368 71502 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 71591 71791 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 71591 71791 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered exon 71898 72177 . + . ID=exon:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered CDS 71898 72152 . + 0 ID=CDS:918742;Parent=Transcript:918742;Name=scaffold_100023.1 +scaffold_1 JGI_Filtered three_prime_UTR 72153 72177 . + . ID=three_prime_UTR:918742;Parent=Transcript:918742 +scaffold_1 JGI_Filtered gene 72255 72617 . - . ID=Al_scaffold_0001_21;Name=Al_scaffold_0001_21 +scaffold_1 JGI_Filtered mRNA 72255 72617 . - . ID=Transcript:909767;Name=Transcript:909767;Parent=Al_scaffold_0001_21 +scaffold_1 JGI_Filtered exon 72255 72291 . - . ID=exon:909767;Parent=Transcript:909767 +scaffold_1 JGI_Filtered CDS 72255 72291 . - 0 ID=CDS:909767;Parent=Transcript:909767;Name=Al_scaffold_0001_21 +scaffold_1 JGI_Filtered exon 72378 72433 . - . ID=exon:909767;Parent=Transcript:909767 +scaffold_1 JGI_Filtered CDS 72378 72433 . - 1 ID=CDS:909767;Parent=Transcript:909767;Name=Al_scaffold_0001_21 +scaffold_1 JGI_Filtered exon 72507 72617 . - . ID=exon:909767;Parent=Transcript:909767 +scaffold_1 JGI_Filtered CDS 72507 72617 . - 0 ID=CDS:909767;Parent=Transcript:909767;Name=Al_scaffold_0001_21 +scaffold_1 JGI_Filtered gene 74785 76652 . - . ID=fgenesh2_kg.1__23__AT1G02065.1;Name=fgenesh2_kg.1__23__AT1G02065.1 +scaffold_1 JGI_Filtered mRNA 74785 76652 . - . ID=Transcript:470069;Name=Transcript:470069;Parent=fgenesh2_kg.1__23__AT1G02065.1 +scaffold_1 JGI_Filtered three_prime_UTR 74785 74825 . - . ID=three_prime_UTR:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered exon 74785 74825 . - . ID=exon:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered exon 74871 75031 . - . ID=exon:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered CDS 74871 75031 . - 0 ID=CDS:470069;Parent=Transcript:470069;Name=fgenesh2_kg.1__23__AT1G02065.1 +scaffold_1 JGI_Filtered exon 75135 75265 . - . ID=exon:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered CDS 75135 75265 . - 2 ID=CDS:470069;Parent=Transcript:470069;Name=fgenesh2_kg.1__23__AT1G02065.1 +scaffold_1 JGI_Filtered exon 75579 76311 . - . ID=exon:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered CDS 75579 76258 . - 1 ID=CDS:470069;Parent=Transcript:470069;Name=fgenesh2_kg.1__23__AT1G02065.1 +scaffold_1 JGI_Filtered exon 76324 76433 . - . ID=exon:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered exon 76452 76571 . - . ID=exon:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered exon 76594 76652 . - . ID=exon:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered five_prime_UTR 76259 76311 . - . ID=five_prime_UTR:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered five_prime_UTR 76324 76433 . - . ID=five_prime_UTR:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered five_prime_UTR 76452 76571 . - . ID=five_prime_UTR:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered five_prime_UTR 76594 76652 . - . ID=five_prime_UTR:470069;Parent=Transcript:470069 +scaffold_1 JGI_Filtered gene 78367 80505 . + . ID=fgenesh1_pm.C_scaffold_1000020;Name=fgenesh1_pm.C_scaffold_1000020 +scaffold_1 JGI_Filtered mRNA 78367 80505 . + . ID=Transcript:311240;Name=Transcript:311240;Parent=fgenesh1_pm.C_scaffold_1000020 +scaffold_1 JGI_Filtered exon 78367 80505 . + . ID=exon:311240;Parent=Transcript:311240 +scaffold_1 JGI_Filtered CDS 78367 80505 . + 0 ID=CDS:311240;Parent=Transcript:311240;Name=fgenesh1_pm.C_scaffold_1000020 +scaffold_1 JGI_Filtered gene 80941 82330 . + . ID=fgenesh2_kg.1__25__AT1G02050.1;Name=fgenesh2_kg.1__25__AT1G02050.1 +scaffold_1 JGI_Filtered mRNA 80941 82330 . + . ID=Transcript:470071;Name=Transcript:470071;Parent=fgenesh2_kg.1__25__AT1G02050.1 +scaffold_1 JGI_Filtered five_prime_UTR 80941 81015 . + . ID=five_prime_UTR:470071;Parent=Transcript:470071 +scaffold_1 JGI_Filtered exon 80941 81217 . + . ID=exon:470071;Parent=Transcript:470071 +scaffold_1 JGI_Filtered CDS 81016 81217 . + 0 ID=CDS:470071;Parent=Transcript:470071;Name=fgenesh2_kg.1__25__AT1G02050.1 +scaffold_1 JGI_Filtered exon 81317 82330 . + . ID=exon:470071;Parent=Transcript:470071 +scaffold_1 JGI_Filtered CDS 81317 82305 . + 1 ID=CDS:470071;Parent=Transcript:470071;Name=fgenesh2_kg.1__25__AT1G02050.1 +scaffold_1 JGI_Filtered three_prime_UTR 82306 82330 . + . ID=three_prime_UTR:470071;Parent=Transcript:470071 +scaffold_1 JGI_Filtered gene 82573 83367 . + . ID=fgenesh1_pg.C_scaffold_1000018;Name=fgenesh1_pg.C_scaffold_1000018 +scaffold_1 JGI_Filtered mRNA 82573 83367 . + . ID=Transcript:333453;Name=Transcript:333453;Parent=fgenesh1_pg.C_scaffold_1000018 +scaffold_1 JGI_Filtered exon 82573 83367 . + . ID=exon:333453;Parent=Transcript:333453 +scaffold_1 JGI_Filtered CDS 82573 83367 . + 0 ID=CDS:333453;Parent=Transcript:333453;Name=fgenesh1_pg.C_scaffold_1000018 +scaffold_1 JGI_Filtered gene 87206 90301 . + . ID=fgenesh1_pg.C_scaffold_1000020;Name=fgenesh1_pg.C_scaffold_1000020 +scaffold_1 JGI_Filtered mRNA 87206 90301 . + . ID=Transcript:333455;Name=Transcript:333455;Parent=fgenesh1_pg.C_scaffold_1000020 +scaffold_1 JGI_Filtered exon 87206 87946 . + . ID=exon:333455;Parent=Transcript:333455 +scaffold_1 JGI_Filtered CDS 87206 87946 . + 0 ID=CDS:333455;Parent=Transcript:333455;Name=fgenesh1_pg.C_scaffold_1000020 +scaffold_1 JGI_Filtered exon 88009 88037 . + . ID=exon:333455;Parent=Transcript:333455 +scaffold_1 JGI_Filtered CDS 88009 88037 . + 0 ID=CDS:333455;Parent=Transcript:333455;Name=fgenesh1_pg.C_scaffold_1000020 +scaffold_1 JGI_Filtered exon 88380 89907 . + . ID=exon:333455;Parent=Transcript:333455 +scaffold_1 JGI_Filtered CDS 88380 89907 . + 2 ID=CDS:333455;Parent=Transcript:333455;Name=fgenesh1_pg.C_scaffold_1000020 +scaffold_1 JGI_Filtered exon 89981 90301 . + . ID=exon:333455;Parent=Transcript:333455 +scaffold_1 JGI_Filtered CDS 89981 90301 . + 0 ID=CDS:333455;Parent=Transcript:333455;Name=fgenesh1_pg.C_scaffold_1000020 +scaffold_1 JGI_Filtered gene 90714 113497 . - . ID=fgenesh2_kg.1__28__AT1G02010.1;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered mRNA 90714 113497 . - . ID=Transcript:470074;Name=Transcript:470074;Parent=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered three_prime_UTR 90714 90999 . - . ID=three_prime_UTR:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered exon 90714 91071 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 91000 91071 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 109532 109621 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 109532 109621 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 109715 109805 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 109715 109805 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 109926 110122 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 109926 110122 . - 1 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 110210 110287 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 110210 110287 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 110379 110495 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 110379 110495 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 110574 110669 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 110574 110669 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 110756 110881 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 110756 110881 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 110971 111067 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 110971 111067 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 111250 111320 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 111250 111320 . - 1 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 111398 111496 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 111398 111496 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 111570 111653 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 111570 111653 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 111736 111906 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 111736 111906 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 112096 112224 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 112096 112224 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 112365 112397 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 112365 112397 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 112490 112586 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 112490 112586 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 112661 112711 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 112661 112711 . - 1 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 112808 112886 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 112808 112886 . - 1 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 112997 113078 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 112997 113078 . - 2 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 113155 113210 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 113155 113210 . - 0 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 113317 113406 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered CDS 113317 113392 . - 2 ID=CDS:470074;Parent=Transcript:470074;Name=fgenesh2_kg.1__28__AT1G02010.1 +scaffold_1 JGI_Filtered exon 113423 113497 . - . ID=exon:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered five_prime_UTR 113393 113406 . - . ID=five_prime_UTR:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered five_prime_UTR 113423 113497 . - . ID=five_prime_UTR:470074;Parent=Transcript:470074 +scaffold_1 JGI_Filtered gene 113969 115315 . - . ID=scaffold_100037.1;Name=scaffold_100037.1 +scaffold_1 JGI_Filtered mRNA 113969 115315 . - . ID=Transcript:918756;Name=Transcript:918756;Parent=scaffold_100037.1 +scaffold_1 JGI_Filtered three_prime_UTR 113969 113990 . - . ID=three_prime_UTR:918756;Parent=Transcript:918756 +scaffold_1 JGI_Filtered exon 113969 115315 . - . ID=exon:918756;Parent=Transcript:918756 +scaffold_1 JGI_Filtered CDS 113991 115295 . - 0 ID=CDS:918756;Parent=Transcript:918756;Name=scaffold_100037.1 +scaffold_1 JGI_Filtered five_prime_UTR 115296 115315 . - . ID=five_prime_UTR:918756;Parent=Transcript:918756 +scaffold_1 JGI_Filtered gene 118008 119066 . + . ID=fgenesh2_kg.1__29__AT1G01990.1;Name=fgenesh2_kg.1__29__AT1G01990.1 +scaffold_1 JGI_Filtered mRNA 118008 119066 . + . ID=Transcript:470075;Name=Transcript:470075;Parent=fgenesh2_kg.1__29__AT1G01990.1 +scaffold_1 JGI_Filtered five_prime_UTR 118008 118056 . + . ID=five_prime_UTR:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered five_prime_UTR 118074 118076 . + . ID=five_prime_UTR:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered exon 118008 118056 . + . ID=exon:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered exon 118074 118805 . + . ID=exon:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered CDS 118077 118805 . + 0 ID=CDS:470075;Parent=Transcript:470075;Name=fgenesh2_kg.1__29__AT1G01990.1 +scaffold_1 JGI_Filtered exon 118827 118883 . + . ID=exon:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered exon 118907 118950 . + . ID=exon:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered exon 118968 119023 . + . ID=exon:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered exon 119038 119066 . + . ID=exon:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered three_prime_UTR 118827 118883 . + . ID=three_prime_UTR:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered three_prime_UTR 118907 118950 . + . ID=three_prime_UTR:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered three_prime_UTR 118968 119023 . + . ID=three_prime_UTR:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered three_prime_UTR 119038 119066 . + . ID=three_prime_UTR:470075;Parent=Transcript:470075 +scaffold_1 JGI_Filtered gene 122468 124310 . + . ID=fgenesh2_kg.1__30__AT1G01980.1;Name=fgenesh2_kg.1__30__AT1G01980.1 +scaffold_1 JGI_Filtered mRNA 122468 124310 . + . ID=Transcript:470076;Name=Transcript:470076;Parent=fgenesh2_kg.1__30__AT1G01980.1 +scaffold_1 JGI_Filtered exon 122468 124093 . + . ID=exon:470076;Parent=Transcript:470076 +scaffold_1 JGI_Filtered CDS 122468 124093 . + 0 ID=CDS:470076;Parent=Transcript:470076;Name=fgenesh2_kg.1__30__AT1G01980.1 +scaffold_1 JGI_Filtered exon 124121 124204 . + . ID=exon:470076;Parent=Transcript:470076 +scaffold_1 JGI_Filtered exon 124217 124220 . + . ID=exon:470076;Parent=Transcript:470076 +scaffold_1 JGI_Filtered exon 124232 124310 . + . ID=exon:470076;Parent=Transcript:470076 +scaffold_1 JGI_Filtered three_prime_UTR 124121 124204 . + . ID=three_prime_UTR:470076;Parent=Transcript:470076 +scaffold_1 JGI_Filtered three_prime_UTR 124217 124220 . + . ID=three_prime_UTR:470076;Parent=Transcript:470076 +scaffold_1 JGI_Filtered three_prime_UTR 124232 124310 . + . ID=three_prime_UTR:470076;Parent=Transcript:470076 +scaffold_1 JGI_Filtered gene 124594 126229 . - . ID=fgenesh2_kg.1__31__AT1G01970.1;Name=fgenesh2_kg.1__31__AT1G01970.1 +scaffold_1 JGI_Filtered mRNA 124594 126229 . - . ID=Transcript:470077;Name=Transcript:470077;Parent=fgenesh2_kg.1__31__AT1G01970.1 +scaffold_1 JGI_Filtered three_prime_UTR 124594 124605 . - . ID=three_prime_UTR:470077;Parent=Transcript:470077 +scaffold_1 JGI_Filtered exon 124594 125385 . - . ID=exon:470077;Parent=Transcript:470077 +scaffold_1 JGI_Filtered CDS 124606 125385 . - 0 ID=CDS:470077;Parent=Transcript:470077;Name=fgenesh2_kg.1__31__AT1G01970.1 +scaffold_1 JGI_Filtered exon 125530 126229 . - . ID=exon:470077;Parent=Transcript:470077 +scaffold_1 JGI_Filtered CDS 125530 125979 . - 0 ID=CDS:470077;Parent=Transcript:470077;Name=fgenesh2_kg.1__31__AT1G01970.1 +scaffold_1 JGI_Filtered five_prime_UTR 125980 126229 . - . ID=five_prime_UTR:470077;Parent=Transcript:470077 +scaffold_1 JGI_Filtered gene 127652 134697 . + . ID=fgenesh2_kg.1__32__AT1G01960.1;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered mRNA 127652 134697 . + . ID=Transcript:470078;Name=Transcript:470078;Parent=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 127652 128817 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 127652 128817 . + 0 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 129023 129340 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 129023 129340 . + 2 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 129526 129880 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 129526 129880 . + 2 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 129970 130392 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 129970 130392 . + 0 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 130515 130807 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 130515 130807 . + 0 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 131095 131368 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 131095 131368 . + 2 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 131695 132194 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 131695 132194 . + 0 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 132279 132600 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 132279 132600 . + 2 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 132680 133037 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 132680 133037 . + 0 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 133129 133778 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 133129 133778 . + 1 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered exon 133873 134697 . + . ID=exon:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered CDS 133873 134466 . + 0 ID=CDS:470078;Parent=Transcript:470078;Name=fgenesh2_kg.1__32__AT1G01960.1 +scaffold_1 JGI_Filtered three_prime_UTR 134467 134697 . + . ID=three_prime_UTR:470078;Parent=Transcript:470078 +scaffold_1 JGI_Filtered gene 134679 139817 . - . ID=fgenesh2_kg.1__33__AT1G01950.1;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered mRNA 134679 139817 . - . ID=Transcript:470079;Name=Transcript:470079;Parent=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered three_prime_UTR 134679 134697 . - . ID=three_prime_UTR:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered three_prime_UTR 134721 134913 . - . ID=three_prime_UTR:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered exon 134679 134697 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered exon 134721 135074 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 134914 135074 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 135153 135281 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 135153 135281 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 135380 135523 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 135380 135523 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 135601 135726 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 135601 135726 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 135865 135990 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 135865 135990 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 136089 136181 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 136089 136181 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 136270 136402 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 136270 136402 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 136747 136878 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 136747 136878 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 136979 137113 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 136979 137113 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 137195 137302 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 137195 137302 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 137433 137636 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 137433 137636 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 137724 137812 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 137724 137812 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 137931 138080 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 137931 138080 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 138234 138387 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 138234 138387 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 138503 138724 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 138503 138724 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 138807 138992 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 138807 138992 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 139078 139200 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 139078 139200 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 139300 139400 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 139300 139400 . - 0 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered exon 139646 139817 . - . ID=exon:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered CDS 139646 139811 . - 2 ID=CDS:470079;Parent=Transcript:470079;Name=fgenesh2_kg.1__33__AT1G01950.1 +scaffold_1 JGI_Filtered five_prime_UTR 139812 139817 . - . ID=five_prime_UTR:470079;Parent=Transcript:470079 +scaffold_1 JGI_Filtered gene 140619 142191 . - . ID=fgenesh1_pg.C_scaffold_1000030;Name=fgenesh1_pg.C_scaffold_1000030 +scaffold_1 JGI_Filtered mRNA 140619 142191 . - . ID=Transcript:333465;Name=Transcript:333465;Parent=fgenesh1_pg.C_scaffold_1000030 +scaffold_1 JGI_Filtered exon 140619 140702 . - . ID=exon:333465;Parent=Transcript:333465 +scaffold_1 JGI_Filtered CDS 140619 140702 . - 0 ID=CDS:333465;Parent=Transcript:333465;Name=fgenesh1_pg.C_scaffold_1000030 +scaffold_1 JGI_Filtered exon 140904 141062 . - . ID=exon:333465;Parent=Transcript:333465 +scaffold_1 JGI_Filtered CDS 140904 141062 . - 0 ID=CDS:333465;Parent=Transcript:333465;Name=fgenesh1_pg.C_scaffold_1000030 +scaffold_1 JGI_Filtered exon 141513 141674 . - . ID=exon:333465;Parent=Transcript:333465 +scaffold_1 JGI_Filtered CDS 141513 141674 . - 0 ID=CDS:333465;Parent=Transcript:333465;Name=fgenesh1_pg.C_scaffold_1000030 +scaffold_1 JGI_Filtered exon 142028 142102 . - . ID=exon:333465;Parent=Transcript:333465 +scaffold_1 JGI_Filtered CDS 142028 142102 . - 0 ID=CDS:333465;Parent=Transcript:333465;Name=fgenesh1_pg.C_scaffold_1000030 +scaffold_1 JGI_Filtered exon 142189 142191 . - . ID=exon:333465;Parent=Transcript:333465 +scaffold_1 JGI_Filtered CDS 142189 142191 . - 0 ID=CDS:333465;Parent=Transcript:333465;Name=fgenesh1_pg.C_scaffold_1000030 +scaffold_1 JGI_Filtered gene 142389 145631 . + . ID=fgenesh2_kg.1__35__AT1G01930.1;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered mRNA 142389 145631 . + . ID=Transcript:470081;Name=Transcript:470081;Parent=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered five_prime_UTR 142389 142407 . + . ID=five_prime_UTR:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered exon 142389 142701 . + . ID=exon:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered CDS 142408 142701 . + 0 ID=CDS:470081;Parent=Transcript:470081;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered exon 142804 143252 . + . ID=exon:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered CDS 142804 143252 . + 0 ID=CDS:470081;Parent=Transcript:470081;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered exon 143436 143550 . + . ID=exon:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered CDS 143436 143550 . + 2 ID=CDS:470081;Parent=Transcript:470081;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered exon 144058 144711 . + . ID=exon:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered CDS 144058 144711 . + 0 ID=CDS:470081;Parent=Transcript:470081;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered exon 145035 145112 . + . ID=exon:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered CDS 145035 145112 . + 0 ID=CDS:470081;Parent=Transcript:470081;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered exon 145204 145248 . + . ID=exon:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered CDS 145204 145248 . + 0 ID=CDS:470081;Parent=Transcript:470081;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered exon 145356 145631 . + . ID=exon:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered CDS 145356 145460 . + 0 ID=CDS:470081;Parent=Transcript:470081;Name=fgenesh2_kg.1__35__AT1G01930.1 +scaffold_1 JGI_Filtered three_prime_UTR 145461 145631 . + . ID=three_prime_UTR:470081;Parent=Transcript:470081 +scaffold_1 JGI_Filtered gene 145719 146083 . + . ID=scaffold_100045.1;Name=scaffold_100045.1 +scaffold_1 JGI_Filtered mRNA 145719 146083 . + . ID=Transcript:918764;Name=Transcript:918764;Parent=scaffold_100045.1 +scaffold_1 JGI_Filtered five_prime_UTR 145719 145738 . + . ID=five_prime_UTR:918764;Parent=Transcript:918764 +scaffold_1 JGI_Filtered exon 145719 146083 . + . ID=exon:918764;Parent=Transcript:918764 +scaffold_1 JGI_Filtered CDS 145739 146062 . + 0 ID=CDS:918764;Parent=Transcript:918764;Name=scaffold_100045.1 +scaffold_1 JGI_Filtered three_prime_UTR 146063 146083 . + . ID=three_prime_UTR:918764;Parent=Transcript:918764 +scaffold_1 JGI_Filtered gene 146361 149918 . - . ID=fgenesh2_kg.1__37__AT1G01920.2;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered mRNA 146361 149918 . - . ID=Transcript:470083;Name=Transcript:470083;Parent=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered three_prime_UTR 146361 146435 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 146478 146615 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 146688 146780 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 146891 147006 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 147186 147434 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 147568 147639 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 147794 147850 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 148007 148071 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 148201 148281 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered three_prime_UTR 148414 148473 . - . ID=three_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered exon 146361 146435 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered exon 146478 146615 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered exon 146688 146780 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 146688 146780 . - 1 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 146891 147006 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 146891 147006 . - 1 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 147186 147434 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 147186 147434 . - 0 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 147568 147639 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 147568 147639 . - 0 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 147794 147850 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 147794 147850 . - 0 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 148007 148071 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 148007 148071 . - 0 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 148201 148281 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 148201 148281 . - 2 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 148414 148473 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 148414 148473 . - 2 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 148531 148556 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 148531 148556 . - 2 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered CDS 148531 146615 . - 0 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 148617 148766 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 148617 148766 . - 1 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 148867 148893 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 148867 148893 . - 1 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 148977 149059 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 148977 149059 . - 1 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 149190 149295 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 149190 149295 . - 0 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 149372 149546 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 149372 149546 . - 1 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 149624 149714 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 149624 149714 . - 2 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 149786 149879 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered CDS 149786 149845 . - 0 ID=CDS:470083;Parent=Transcript:470083;Name=fgenesh2_kg.1__37__AT1G01920.2 +scaffold_1 JGI_Filtered exon 149902 149918 . - . ID=exon:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered five_prime_UTR 149846 149879 . - . ID=five_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered five_prime_UTR 149902 149918 . - . ID=five_prime_UTR:470083;Parent=Transcript:470083 +scaffold_1 JGI_Filtered gene 150165 152787 . + . ID=fgenesh2_kg.1__42__AT1G01910.4;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered mRNA 150165 152787 . + . ID=Transcript:470088;Name=Transcript:470088;Parent=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered five_prime_UTR 150165 150169 . + . ID=five_prime_UTR:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered exon 150165 150424 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered CDS 150170 150424 . + 0 ID=CDS:470088;Parent=Transcript:470088;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered exon 150934 151058 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered CDS 150934 151058 . + 0 ID=CDS:470088;Parent=Transcript:470088;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered exon 151148 151298 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered CDS 151148 151298 . + 2 ID=CDS:470088;Parent=Transcript:470088;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered exon 151399 151509 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered CDS 151399 151509 . + 0 ID=CDS:470088;Parent=Transcript:470088;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered exon 151717 151855 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered CDS 151717 151855 . + 0 ID=CDS:470088;Parent=Transcript:470088;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered exon 151949 152064 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered CDS 151949 152064 . + 1 ID=CDS:470088;Parent=Transcript:470088;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered exon 152185 152379 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered CDS 152185 152349 . + 0 ID=CDS:470088;Parent=Transcript:470088;Name=fgenesh2_kg.1__42__AT1G01910.4 +scaffold_1 JGI_Filtered exon 152494 152718 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered exon 152764 152787 . + . ID=exon:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered three_prime_UTR 152350 152379 . + . ID=three_prime_UTR:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered three_prime_UTR 152494 152718 . + . ID=three_prime_UTR:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered three_prime_UTR 152764 152787 . + . ID=three_prime_UTR:470088;Parent=Transcript:470088 +scaffold_1 JGI_Filtered gene 152834 155670 . - . ID=Al_scaffold_0001_39;Name=Al_scaffold_0001_39 +scaffold_1 JGI_Filtered mRNA 152834 155670 . - . ID=Transcript:909785;Name=Transcript:909785;Parent=Al_scaffold_0001_39 +scaffold_1 JGI_Filtered exon 152834 154508 . - . ID=exon:909785;Parent=Transcript:909785 +scaffold_1 JGI_Filtered CDS 152834 154508 . - 0 ID=CDS:909785;Parent=Transcript:909785;Name=Al_scaffold_0001_39 +scaffold_1 JGI_Filtered exon 155021 155670 . - . ID=exon:909785;Parent=Transcript:909785 +scaffold_1 JGI_Filtered CDS 155021 155670 . - 1 ID=CDS:909785;Parent=Transcript:909785;Name=Al_scaffold_0001_39 +scaffold_1 JGI_Filtered gene 156948 159348 . + . ID=fgenesh1_pm.C_scaffold_1000036;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered mRNA 156948 159348 . + . ID=Transcript:311256;Name=Transcript:311256;Parent=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 156948 157142 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 156948 157142 . + 0 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 157332 157508 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 157332 157508 . + 0 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 157585 157755 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 157585 157755 . + 0 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 157836 158017 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 157836 158017 . + 0 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 158097 158308 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 158097 158308 . + 2 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 158341 158460 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 158341 158460 . + 1 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 158542 159020 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 158542 159020 . + 1 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered exon 159112 159348 . + . ID=exon:311256;Parent=Transcript:311256 +scaffold_1 JGI_Filtered CDS 159112 159348 . + 0 ID=CDS:311256;Parent=Transcript:311256;Name=fgenesh1_pm.C_scaffold_1000036 +scaffold_1 JGI_Filtered gene 159615 161800 . + . ID=fgenesh2_kg.1__44__AT1G01860.1;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered mRNA 159615 161800 . + . ID=Transcript:470090;Name=Transcript:470090;Parent=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered five_prime_UTR 159615 159629 . + . ID=five_prime_UTR:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered exon 159615 159857 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 159630 159857 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 159950 160099 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 159950 160099 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 160185 160241 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 160185 160241 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 160319 160417 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 160319 160417 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 160516 160611 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 160516 160611 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 160691 160775 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 160691 160775 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 160865 160917 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 160865 160917 . + 1 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 161009 161092 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 161009 161092 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 161165 161275 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 161165 161275 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 161444 161611 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered CDS 161444 161509 . + 0 ID=CDS:470090;Parent=Transcript:470090;Name=fgenesh2_kg.1__44__AT1G01860.1 +scaffold_1 JGI_Filtered exon 161626 161710 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered exon 161723 161800 . + . ID=exon:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered three_prime_UTR 161510 161611 . + . ID=three_prime_UTR:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered three_prime_UTR 161626 161710 . + . ID=three_prime_UTR:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered three_prime_UTR 161723 161800 . + . ID=three_prime_UTR:470090;Parent=Transcript:470090 +scaffold_1 JGI_Filtered gene 161789 162258 . - . ID=scaffold_100051.1;Name=scaffold_100051.1 +scaffold_1 JGI_Filtered mRNA 161789 162258 . - . ID=Transcript:918770;Name=Transcript:918770;Parent=scaffold_100051.1 +scaffold_1 JGI_Filtered three_prime_UTR 161789 161809 . - . ID=three_prime_UTR:918770;Parent=Transcript:918770 +scaffold_1 JGI_Filtered exon 161789 162258 . - . ID=exon:918770;Parent=Transcript:918770 +scaffold_1 JGI_Filtered CDS 161810 162238 . - 0 ID=CDS:918770;Parent=Transcript:918770;Name=scaffold_100051.1 +scaffold_1 JGI_Filtered five_prime_UTR 162239 162258 . - . ID=five_prime_UTR:918770;Parent=Transcript:918770 +scaffold_1 JGI_Filtered gene 164416 168249 . + . ID=fgenesh2_kg.1__46__AT1G01830.3;Name=fgenesh2_kg.1__46__AT1G01830.3 +scaffold_1 JGI_Filtered mRNA 164416 168249 . + . ID=Transcript:470092;Name=Transcript:470092;Parent=fgenesh2_kg.1__46__AT1G01830.3 +scaffold_1 JGI_Filtered five_prime_UTR 164416 164539 . + . ID=five_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered five_prime_UTR 164601 164646 . + . ID=five_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered five_prime_UTR 164680 164690 . + . ID=five_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered five_prime_UTR 165345 165392 . + . ID=five_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered five_prime_UTR 166016 166167 . + . ID=five_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered five_prime_UTR 166306 166373 . + . ID=five_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered exon 164416 164539 . + . ID=exon:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered exon 164601 164646 . + . ID=exon:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered exon 164680 164690 . + . ID=exon:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered exon 165345 165392 . + . ID=exon:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered exon 166016 166167 . + . ID=exon:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered exon 166306 168085 . + . ID=exon:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered CDS 166374 168083 . + 0 ID=CDS:470092;Parent=Transcript:470092;Name=fgenesh2_kg.1__46__AT1G01830.3 +scaffold_1 JGI_Filtered exon 168106 168249 . + . ID=exon:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered three_prime_UTR 168084 168085 . + . ID=three_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered three_prime_UTR 168106 168249 . + . ID=three_prime_UTR:470092;Parent=Transcript:470092 +scaffold_1 JGI_Filtered gene 168435 168702 . + . ID=scaffold_100053.1;Name=scaffold_100053.1 +scaffold_1 JGI_Filtered mRNA 168435 168702 . + . ID=Transcript:918772;Name=Transcript:918772;Parent=scaffold_100053.1 +scaffold_1 JGI_Filtered five_prime_UTR 168435 168454 . + . ID=five_prime_UTR:918772;Parent=Transcript:918772 +scaffold_1 JGI_Filtered exon 168435 168702 . + . ID=exon:918772;Parent=Transcript:918772 +scaffold_1 JGI_Filtered CDS 168455 168682 . + 0 ID=CDS:918772;Parent=Transcript:918772;Name=scaffold_100053.1 +scaffold_1 JGI_Filtered three_prime_UTR 168683 168702 . + . ID=three_prime_UTR:918772;Parent=Transcript:918772 +scaffold_1 JGI_Filtered gene 171411 173431 . + . ID=fgenesh2_kg.1__48__AT1G01820.1;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered mRNA 171411 173431 . + . ID=Transcript:470094;Name=Transcript:470094;Parent=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered five_prime_UTR 171411 171499 . + . ID=five_prime_UTR:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered five_prime_UTR 171750 171768 . + . ID=five_prime_UTR:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered exon 171411 171499 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered exon 171750 171960 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered CDS 171769 171960 . + 0 ID=CDS:470094;Parent=Transcript:470094;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered exon 172325 172399 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered CDS 172325 172399 . + 0 ID=CDS:470094;Parent=Transcript:470094;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered exon 172484 172558 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered CDS 172484 172558 . + 0 ID=CDS:470094;Parent=Transcript:470094;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered exon 172648 172728 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered CDS 172648 172728 . + 0 ID=CDS:470094;Parent=Transcript:470094;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered exon 172819 172893 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered CDS 172819 172893 . + 0 ID=CDS:470094;Parent=Transcript:470094;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered exon 172982 173155 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered CDS 172982 173155 . + 0 ID=CDS:470094;Parent=Transcript:470094;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered exon 173240 173327 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered CDS 173240 173275 . + 0 ID=CDS:470094;Parent=Transcript:470094;Name=fgenesh2_kg.1__48__AT1G01820.1 +scaffold_1 JGI_Filtered exon 173347 173431 . + . ID=exon:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered three_prime_UTR 173276 173327 . + . ID=three_prime_UTR:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered three_prime_UTR 173347 173431 . + . ID=three_prime_UTR:470094;Parent=Transcript:470094 +scaffold_1 JGI_Filtered gene 173573 174151 . - . ID=fgenesh2_kg.1__49__AT1G01810.1;Name=fgenesh2_kg.1__49__AT1G01810.1 +scaffold_1 JGI_Filtered mRNA 173573 174151 . - . ID=Transcript:470095;Name=Transcript:470095;Parent=fgenesh2_kg.1__49__AT1G01810.1 +scaffold_1 JGI_Filtered three_prime_UTR 173573 173611 . - . ID=three_prime_UTR:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered three_prime_UTR 173622 173647 . - . ID=three_prime_UTR:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered three_prime_UTR 173673 173687 . - . ID=three_prime_UTR:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered three_prime_UTR 173701 173716 . - . ID=three_prime_UTR:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered exon 173573 173611 . - . ID=exon:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered exon 173622 173647 . - . ID=exon:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered exon 173673 173687 . - . ID=exon:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered exon 173701 174151 . - . ID=exon:470095;Parent=Transcript:470095 +scaffold_1 JGI_Filtered CDS 173717 174151 . - 0 ID=CDS:470095;Parent=Transcript:470095;Name=fgenesh2_kg.1__49__AT1G01810.1 +scaffold_1 JGI_Filtered gene 175723 177344 . - . ID=scaffold_100056.1;Name=scaffold_100056.1 +scaffold_1 JGI_Filtered mRNA 175723 177344 . - . ID=Transcript:918775;Name=Transcript:918775;Parent=scaffold_100056.1 +scaffold_1 JGI_Filtered three_prime_UTR 175723 175742 . - . ID=three_prime_UTR:918775;Parent=Transcript:918775 +scaffold_1 JGI_Filtered exon 175723 176120 . - . ID=exon:918775;Parent=Transcript:918775 +scaffold_1 JGI_Filtered CDS 175743 176120 . - 0 ID=CDS:918775;Parent=Transcript:918775;Name=scaffold_100056.1 +scaffold_1 JGI_Filtered exon 176339 176515 . - . ID=exon:918775;Parent=Transcript:918775 +scaffold_1 JGI_Filtered CDS 176339 176515 . - 0 ID=CDS:918775;Parent=Transcript:918775;Name=scaffold_100056.1 +scaffold_1 JGI_Filtered exon 176622 176687 . - . ID=exon:918775;Parent=Transcript:918775 +scaffold_1 JGI_Filtered CDS 176622 176687 . - 0 ID=CDS:918775;Parent=Transcript:918775;Name=scaffold_100056.1 +scaffold_1 JGI_Filtered exon 176952 177204 . - . ID=exon:918775;Parent=Transcript:918775 +scaffold_1 JGI_Filtered CDS 176952 177204 . - 0 ID=CDS:918775;Parent=Transcript:918775;Name=scaffold_100056.1 +scaffold_1 JGI_Filtered exon 177308 177344 . - . ID=exon:918775;Parent=Transcript:918775 +scaffold_1 JGI_Filtered CDS 177308 177321 . - 1 ID=CDS:918775;Parent=Transcript:918775;Name=scaffold_100056.1 +scaffold_1 JGI_Filtered five_prime_UTR 177322 177344 . - . ID=five_prime_UTR:918775;Parent=Transcript:918775 +scaffold_1 JGI_Filtered gene 178456 184533 . - . ID=fgenesh1_pm.C_scaffold_1000043;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered mRNA 178456 184533 . - . ID=Transcript:311263;Name=Transcript:311263;Parent=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 178456 178578 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 178456 178578 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 178671 178745 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 178671 178745 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 178828 178884 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 178828 178884 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 178976 179152 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 178976 179152 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 179247 179313 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 179247 179313 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 179583 179641 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 179583 179641 . - 1 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 179769 179822 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 179769 179822 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 179946 180095 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 179946 180095 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 180235 180444 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 180235 180444 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 180615 180743 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 180615 180743 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 180855 180959 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 180855 180959 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 181183 181272 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 181183 181272 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 181520 181585 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 181520 181585 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 181663 181731 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 181663 181731 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 181865 181984 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 181865 181984 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 182099 182158 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 182099 182158 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 182246 182382 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 182246 182382 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 182577 182667 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 182577 182667 . - 2 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 182753 182924 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 182753 182924 . - 0 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered exon 183029 184533 . - . ID=exon:311263;Parent=Transcript:311263 +scaffold_1 JGI_Filtered CDS 183029 184533 . - 1 ID=CDS:311263;Parent=Transcript:311263;Name=fgenesh1_pm.C_scaffold_1000043 +scaffold_1 JGI_Filtered gene 185231 186495 . - . ID=scaffold_100058.1;Name=scaffold_100058.1 +scaffold_1 JGI_Filtered mRNA 185231 186495 . - . ID=Transcript:918777;Name=Transcript:918777;Parent=scaffold_100058.1 +scaffold_1 JGI_Filtered three_prime_UTR 185231 185250 . - . ID=three_prime_UTR:918777;Parent=Transcript:918777 +scaffold_1 JGI_Filtered exon 185231 185520 . - . ID=exon:918777;Parent=Transcript:918777 +scaffold_1 JGI_Filtered CDS 185251 185520 . - 0 ID=CDS:918777;Parent=Transcript:918777;Name=scaffold_100058.1 +scaffold_1 JGI_Filtered exon 185843 185932 . - . ID=exon:918777;Parent=Transcript:918777 +scaffold_1 JGI_Filtered CDS 185843 185932 . - 0 ID=CDS:918777;Parent=Transcript:918777;Name=scaffold_100058.1 +scaffold_1 JGI_Filtered exon 186040 186062 . - . ID=exon:918777;Parent=Transcript:918777 +scaffold_1 JGI_Filtered CDS 186040 186062 . - 0 ID=CDS:918777;Parent=Transcript:918777;Name=scaffold_100058.1 +scaffold_1 JGI_Filtered exon 186151 186250 . - . ID=exon:918777;Parent=Transcript:918777 +scaffold_1 JGI_Filtered CDS 186151 186250 . - 2 ID=CDS:918777;Parent=Transcript:918777;Name=scaffold_100058.1 +scaffold_1 JGI_Filtered exon 186341 186495 . - . ID=exon:918777;Parent=Transcript:918777 +scaffold_1 JGI_Filtered CDS 186341 186475 . - 0 ID=CDS:918777;Parent=Transcript:918777;Name=scaffold_100058.1 +scaffold_1 JGI_Filtered five_prime_UTR 186476 186495 . - . ID=five_prime_UTR:918777;Parent=Transcript:918777 +scaffold_1 JGI_Filtered gene 186514 191052 . - . ID=fgenesh2_kg.1__52__AT1G01770.1;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered mRNA 186514 191052 . - . ID=Transcript:470098;Name=Transcript:470098;Parent=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered three_prime_UTR 186514 186539 . - . ID=three_prime_UTR:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered three_prime_UTR 186622 186895 . - . ID=three_prime_UTR:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered three_prime_UTR 187202 187636 . - . ID=three_prime_UTR:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered three_prime_UTR 187868 187975 . - . ID=three_prime_UTR:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered three_prime_UTR 188065 188104 . - . ID=three_prime_UTR:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered exon 186514 186539 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered exon 186622 186895 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered exon 187202 187636 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered exon 187868 187975 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 187868 187975 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 188065 188104 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 188065 188104 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 188391 188623 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 188391 188623 . - 1 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered CDS 188391 187636 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 188773 188853 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 188773 188853 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 188938 189057 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 188938 189057 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 189136 189326 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 189136 189326 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 189419 189533 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 189419 189533 . - 2 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 189739 189852 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 189739 189852 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 190064 190104 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 190064 190104 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 190219 190317 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 190219 190317 . - 2 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 190407 190481 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 190407 190481 . - 2 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 190603 190804 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 190603 190804 . - 2 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 190875 190976 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered CDS 190875 190925 . - 0 ID=CDS:470098;Parent=Transcript:470098;Name=fgenesh2_kg.1__52__AT1G01770.1 +scaffold_1 JGI_Filtered exon 191011 191052 . - . ID=exon:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered five_prime_UTR 190926 190976 . - . ID=five_prime_UTR:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered five_prime_UTR 191011 191052 . - . ID=five_prime_UTR:470098;Parent=Transcript:470098 +scaffold_1 JGI_Filtered gene 191251 193076 . + . ID=Al_scaffold_0001_50;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered mRNA 191251 193076 . + . ID=Transcript:909796;Name=Transcript:909796;Parent=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 191251 191383 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 191251 191383 . + 0 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 191460 191765 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 191460 191765 . + 1 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 191855 192001 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 191855 192001 . + 1 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 192124 192237 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 192124 192237 . + 1 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 192330 192499 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 192330 192499 . + 1 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 192579 192655 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 192579 192655 . + 0 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 192748 192867 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 192748 192867 . + 2 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered exon 192944 193076 . + . ID=exon:909796;Parent=Transcript:909796 +scaffold_1 JGI_Filtered CDS 192944 193076 . + 2 ID=CDS:909796;Parent=Transcript:909796;Name=Al_scaffold_0001_50 +scaffold_1 JGI_Filtered gene 193425 194152 . - . ID=scaffold_100061.1;Name=scaffold_100061.1 +scaffold_1 JGI_Filtered mRNA 193425 194152 . - . ID=Transcript:918780;Name=Transcript:918780;Parent=scaffold_100061.1 +scaffold_1 JGI_Filtered three_prime_UTR 193425 193531 . - . ID=three_prime_UTR:918780;Parent=Transcript:918780 +scaffold_1 JGI_Filtered exon 193425 193685 . - . ID=exon:918780;Parent=Transcript:918780 +scaffold_1 JGI_Filtered CDS 193532 193685 . - 0 ID=CDS:918780;Parent=Transcript:918780;Name=scaffold_100061.1 +scaffold_1 JGI_Filtered exon 193761 194026 . - . ID=exon:918780;Parent=Transcript:918780 +scaffold_1 JGI_Filtered CDS 193761 194026 . - 1 ID=CDS:918780;Parent=Transcript:918780;Name=scaffold_100061.1 +scaffold_1 JGI_Filtered exon 194127 194152 . - . ID=exon:918780;Parent=Transcript:918780 +scaffold_1 JGI_Filtered CDS 194127 194129 . - 0 ID=CDS:918780;Parent=Transcript:918780;Name=scaffold_100061.1 +scaffold_1 JGI_Filtered five_prime_UTR 194130 194152 . - . ID=five_prime_UTR:918780;Parent=Transcript:918780 +scaffold_1 JGI_Filtered gene 197601 198678 . - . ID=fgenesh2_kg.1__55__AT1G01730.1;Name=fgenesh2_kg.1__55__AT1G01730.1 +scaffold_1 JGI_Filtered mRNA 197601 198678 . - . ID=Transcript:470101;Name=Transcript:470101;Parent=fgenesh2_kg.1__55__AT1G01730.1 +scaffold_1 JGI_Filtered three_prime_UTR 197601 197718 . - . ID=three_prime_UTR:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered three_prime_UTR 197755 197782 . - . ID=three_prime_UTR:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered exon 197601 197718 . - . ID=exon:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered exon 197755 198002 . - . ID=exon:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered CDS 197783 198002 . - 0 ID=CDS:470101;Parent=Transcript:470101;Name=fgenesh2_kg.1__55__AT1G01730.1 +scaffold_1 JGI_Filtered exon 198024 198120 . - . ID=exon:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered CDS 198024 198120 . - 1 ID=CDS:470101;Parent=Transcript:470101;Name=fgenesh2_kg.1__55__AT1G01730.1 +scaffold_1 JGI_Filtered exon 198230 198284 . - . ID=exon:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered CDS 198230 198284 . - 2 ID=CDS:470101;Parent=Transcript:470101;Name=fgenesh2_kg.1__55__AT1G01730.1 +scaffold_1 JGI_Filtered exon 198360 198678 . - . ID=exon:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered CDS 198360 198632 . - 0 ID=CDS:470101;Parent=Transcript:470101;Name=fgenesh2_kg.1__55__AT1G01730.1 +scaffold_1 JGI_Filtered five_prime_UTR 198633 198678 . - . ID=five_prime_UTR:470101;Parent=Transcript:470101 +scaffold_1 JGI_Filtered gene 198837 204518 . + . ID=fgenesh2_kg.1__56__AT1G01725.1;Name=fgenesh2_kg.1__56__AT1G01725.1 +scaffold_1 JGI_Filtered mRNA 198837 204518 . + . ID=Transcript:470102;Name=Transcript:470102;Parent=fgenesh2_kg.1__56__AT1G01725.1 +scaffold_1 JGI_Filtered five_prime_UTR 198837 198875 . + . ID=five_prime_UTR:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered exon 198837 198989 . + . ID=exon:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered CDS 198876 198989 . + 0 ID=CDS:470102;Parent=Transcript:470102;Name=fgenesh2_kg.1__56__AT1G01725.1 +scaffold_1 JGI_Filtered exon 204167 204274 . + . ID=exon:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered CDS 204167 204230 . + 0 ID=CDS:470102;Parent=Transcript:470102;Name=fgenesh2_kg.1__56__AT1G01725.1 +scaffold_1 JGI_Filtered exon 204305 204369 . + . ID=exon:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered exon 204424 204435 . + . ID=exon:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered exon 204464 204474 . + . ID=exon:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered exon 204499 204518 . + . ID=exon:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered three_prime_UTR 204231 204274 . + . ID=three_prime_UTR:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered three_prime_UTR 204305 204369 . + . ID=three_prime_UTR:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered three_prime_UTR 204424 204435 . + . ID=three_prime_UTR:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered three_prime_UTR 204464 204474 . + . ID=three_prime_UTR:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered three_prime_UTR 204499 204518 . + . ID=three_prime_UTR:470102;Parent=Transcript:470102 +scaffold_1 JGI_Filtered gene 204808 205917 . - . ID=scaffold_100066.1;Name=scaffold_100066.1 +scaffold_1 JGI_Filtered mRNA 204808 205917 . - . ID=Transcript:918785;Name=Transcript:918785;Parent=scaffold_100066.1 +scaffold_1 JGI_Filtered three_prime_UTR 204808 204827 . - . ID=three_prime_UTR:918785;Parent=Transcript:918785 +scaffold_1 JGI_Filtered exon 204808 205277 . - . ID=exon:918785;Parent=Transcript:918785 +scaffold_1 JGI_Filtered CDS 204828 205277 . - 0 ID=CDS:918785;Parent=Transcript:918785;Name=scaffold_100066.1 +scaffold_1 JGI_Filtered exon 205364 205641 . - . ID=exon:918785;Parent=Transcript:918785 +scaffold_1 JGI_Filtered CDS 205364 205641 . - 0 ID=CDS:918785;Parent=Transcript:918785;Name=scaffold_100066.1 +scaffold_1 JGI_Filtered exon 205728 205917 . - . ID=exon:918785;Parent=Transcript:918785 +scaffold_1 JGI_Filtered CDS 205728 205887 . - 2 ID=CDS:918785;Parent=Transcript:918785;Name=scaffold_100066.1 +scaffold_1 JGI_Filtered five_prime_UTR 205888 205917 . - . ID=five_prime_UTR:918785;Parent=Transcript:918785 +scaffold_1 JGI_Filtered gene 206707 211900 . - . ID=fgenesh2_kg.1__58__AT1G01710.1;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered mRNA 206707 211900 . - . ID=Transcript:470104;Name=Transcript:470104;Parent=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered three_prime_UTR 206707 206984 . - . ID=three_prime_UTR:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered three_prime_UTR 207538 207543 . - . ID=three_prime_UTR:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered three_prime_UTR 207643 207670 . - . ID=three_prime_UTR:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered three_prime_UTR 207683 207884 . - . ID=three_prime_UTR:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered three_prime_UTR 207913 208022 . - . ID=three_prime_UTR:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered three_prime_UTR 208044 208113 . - . ID=three_prime_UTR:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered three_prime_UTR 208147 208329 . - . ID=three_prime_UTR:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered exon 206707 206984 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered exon 207538 207543 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered exon 207643 207670 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered exon 207683 207884 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered exon 207913 208022 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered exon 208044 208113 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered exon 208147 208407 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 208330 208407 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 208540 208608 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 208540 208608 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 208940 208988 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 208940 208988 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 209130 209231 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 209130 209231 . - 1 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 209497 209553 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 209497 209553 . - 1 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 209750 209854 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 209750 209854 . - 1 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 209939 209994 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 209939 209994 . - 1 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 210068 210130 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 210068 210130 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 210262 210374 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 210262 210374 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 210489 210576 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 210489 210576 . - 2 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 210710 210787 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 210710 210787 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 211012 211137 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 211012 211137 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 211240 211286 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 211240 211286 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 211371 211446 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 211371 211446 . - 2 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 211530 211597 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 211530 211597 . - 0 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 211707 211799 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 211707 211799 . - 2 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered exon 211885 211900 . - . ID=exon:470104;Parent=Transcript:470104 +scaffold_1 JGI_Filtered CDS 211885 211900 . - 2 ID=CDS:470104;Parent=Transcript:470104;Name=fgenesh2_kg.1__58__AT1G01710.1 +scaffold_1 JGI_Filtered gene 216564 216889 . + . ID=scaffold_100069.1;Name=scaffold_100069.1 +scaffold_1 JGI_Filtered mRNA 216564 216889 . + . ID=Transcript:918788;Name=Transcript:918788;Parent=scaffold_100069.1 +scaffold_1 JGI_Filtered five_prime_UTR 216564 216583 . + . ID=five_prime_UTR:918788;Parent=Transcript:918788 +scaffold_1 JGI_Filtered exon 216564 216889 . + . ID=exon:918788;Parent=Transcript:918788 +scaffold_1 JGI_Filtered CDS 216584 216868 . + 0 ID=CDS:918788;Parent=Transcript:918788;Name=scaffold_100069.1 +scaffold_1 JGI_Filtered three_prime_UTR 216869 216889 . + . ID=three_prime_UTR:918788;Parent=Transcript:918788 +scaffold_1 JGI_Filtered gene 220193 225616 . - . ID=Al_scaffold_0001_57;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered mRNA 220193 225616 . - . ID=Transcript:909803;Name=Transcript:909803;Parent=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 220193 220728 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 220193 220728 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 221051 221182 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 221051 221182 . - 2 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 221257 221832 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 221257 221832 . - 2 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 222575 222652 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 222575 222652 . - 2 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 222767 222851 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 222767 222851 . - 2 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 222947 223094 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 222947 223094 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 223180 223235 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 223180 223235 . - 1 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 223328 223369 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 223328 223369 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 223452 223508 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 223452 223508 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 223584 223625 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 223584 223625 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 223700 223762 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 223700 223762 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 223902 224096 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 223902 224096 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 224185 224237 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 224185 224237 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 224598 224735 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 224598 224735 . - 2 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 224841 224994 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 224841 224994 . - 2 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 225096 225249 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 225096 225249 . - 0 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered exon 225558 225616 . - . ID=exon:909803;Parent=Transcript:909803 +scaffold_1 JGI_Filtered CDS 225558 225616 . - 1 ID=CDS:909803;Parent=Transcript:909803;Name=Al_scaffold_0001_57 +scaffold_1 JGI_Filtered gene 226539 228679 . + . ID=Al_scaffold_0001_58;Name=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered mRNA 226539 228679 . + . ID=Transcript:909804;Name=Transcript:909804;Parent=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered exon 226539 226677 . + . ID=exon:909804;Parent=Transcript:909804 +scaffold_1 JGI_Filtered CDS 226539 226677 . + 0 ID=CDS:909804;Parent=Transcript:909804;Name=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered exon 227470 227576 . + . ID=exon:909804;Parent=Transcript:909804 +scaffold_1 JGI_Filtered CDS 227470 227576 . + 1 ID=CDS:909804;Parent=Transcript:909804;Name=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered exon 227659 227891 . + . ID=exon:909804;Parent=Transcript:909804 +scaffold_1 JGI_Filtered CDS 227659 227891 . + 0 ID=CDS:909804;Parent=Transcript:909804;Name=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered exon 228002 228131 . + . ID=exon:909804;Parent=Transcript:909804 +scaffold_1 JGI_Filtered CDS 228002 228131 . + 2 ID=CDS:909804;Parent=Transcript:909804;Name=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered exon 228237 228359 . + . ID=exon:909804;Parent=Transcript:909804 +scaffold_1 JGI_Filtered CDS 228237 228359 . + 0 ID=CDS:909804;Parent=Transcript:909804;Name=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered exon 228482 228679 . + . ID=exon:909804;Parent=Transcript:909804 +scaffold_1 JGI_Filtered CDS 228482 228679 . + 0 ID=CDS:909804;Parent=Transcript:909804;Name=Al_scaffold_0001_58 +scaffold_1 JGI_Filtered gene 229820 235338 . + . ID=fgenesh1_pg.C_scaffold_1000054;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered mRNA 229820 235338 . + . ID=Transcript:333489;Name=Transcript:333489;Parent=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 229820 229976 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 229820 229976 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 230421 230524 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 230421 230524 . + 1 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 230701 230831 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 230701 230831 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 230975 231079 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 230975 231079 . + 2 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 231154 231310 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 231154 231310 . + 2 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 231606 232025 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 231606 232025 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 232245 232298 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 232245 232298 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 232686 232896 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 232686 232896 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 233059 233135 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 233059 233135 . + 1 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 233287 233417 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 233287 233417 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 233491 233595 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 233491 233595 . + 2 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 233681 233861 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 233681 233861 . + 2 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 233967 234104 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 233967 234104 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 234183 234449 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 234183 234449 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 234526 234666 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 234526 234666 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 234738 235058 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 234738 235058 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered exon 235153 235338 . + . ID=exon:333489;Parent=Transcript:333489 +scaffold_1 JGI_Filtered CDS 235153 235338 . + 0 ID=CDS:333489;Parent=Transcript:333489;Name=fgenesh1_pg.C_scaffold_1000054 +scaffold_1 JGI_Filtered gene 236778 241721 . + . ID=fgenesh2_kg.1__64__AT1G01650.1;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered mRNA 236778 241721 . + . ID=Transcript:470110;Name=Transcript:470110;Parent=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered five_prime_UTR 236778 236880 . + . ID=five_prime_UTR:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered five_prime_UTR 236892 236927 . + . ID=five_prime_UTR:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered exon 236778 236880 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered exon 236892 237071 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 236928 237071 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 237546 237704 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 237546 237704 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 237800 237911 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 237800 237911 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 238023 238142 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 238023 238142 . + 1 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 238224 238375 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 238224 238375 . + 1 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 238493 238675 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 238493 238675 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 238770 238804 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 238770 238804 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 239232 239394 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 239232 239394 . + 2 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 239557 239610 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 239557 239610 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 239951 240043 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 239951 240043 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 240196 240338 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 240196 240338 . + 0 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 241021 241091 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 241021 241091 . + 2 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 241173 241256 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 241173 241256 . + 1 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 241349 241642 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered CDS 241349 241458 . + 1 ID=CDS:470110;Parent=Transcript:470110;Name=fgenesh2_kg.1__64__AT1G01650.1 +scaffold_1 JGI_Filtered exon 241662 241721 . + . ID=exon:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered three_prime_UTR 241459 241642 . + . ID=three_prime_UTR:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered three_prime_UTR 241662 241721 . + . ID=three_prime_UTR:470110;Parent=Transcript:470110 +scaffold_1 JGI_Filtered gene 242562 243321 . + . ID=scaffold_100076.1;Name=scaffold_100076.1 +scaffold_1 JGI_Filtered mRNA 242562 243321 . + . ID=Transcript:918795;Name=Transcript:918795;Parent=scaffold_100076.1 +scaffold_1 JGI_Filtered five_prime_UTR 242562 242581 . + . ID=five_prime_UTR:918795;Parent=Transcript:918795 +scaffold_1 JGI_Filtered exon 242562 242694 . + . ID=exon:918795;Parent=Transcript:918795 +scaffold_1 JGI_Filtered CDS 242582 242694 . + 0 ID=CDS:918795;Parent=Transcript:918795;Name=scaffold_100076.1 +scaffold_1 JGI_Filtered exon 242826 243321 . + . ID=exon:918795;Parent=Transcript:918795 +scaffold_1 JGI_Filtered CDS 242826 243300 . + 2 ID=CDS:918795;Parent=Transcript:918795;Name=scaffold_100076.1 +scaffold_1 JGI_Filtered three_prime_UTR 243301 243321 . + . ID=three_prime_UTR:918795;Parent=Transcript:918795 +scaffold_1 JGI_Filtered gene 243695 245459 . - . ID=fgenesh2_kg.1__67__AT1G01630.1;Name=fgenesh2_kg.1__67__AT1G01630.1 +scaffold_1 JGI_Filtered mRNA 243695 245459 . - . ID=Transcript:470113;Name=Transcript:470113;Parent=fgenesh2_kg.1__67__AT1G01630.1 +scaffold_1 JGI_Filtered three_prime_UTR 243695 243738 . - . ID=three_prime_UTR:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered three_prime_UTR 243763 243928 . - . ID=three_prime_UTR:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered three_prime_UTR 244012 244122 . - . ID=three_prime_UTR:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered three_prime_UTR 244533 244638 . - . ID=three_prime_UTR:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered exon 243695 243738 . - . ID=exon:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered exon 243763 243928 . - . ID=exon:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered exon 244012 244122 . - . ID=exon:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered CDS 244012 244122 . - 0 ID=CDS:470113;Parent=Transcript:470113;Name=fgenesh2_kg.1__67__AT1G01630.1 +scaffold_1 JGI_Filtered exon 244533 244638 . - . ID=exon:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered CDS 244533 244638 . - 0 ID=CDS:470113;Parent=Transcript:470113;Name=fgenesh2_kg.1__67__AT1G01630.1 +scaffold_1 JGI_Filtered exon 244744 245039 . - . ID=exon:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered CDS 244744 245039 . - 1 ID=CDS:470113;Parent=Transcript:470113;Name=fgenesh2_kg.1__67__AT1G01630.1 +scaffold_1 JGI_Filtered CDS 244744 243928 . - 0 ID=CDS:470113;Parent=Transcript:470113;Name=fgenesh2_kg.1__67__AT1G01630.1 +scaffold_1 JGI_Filtered exon 245130 245459 . - . ID=exon:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered CDS 245130 245270 . - 0 ID=CDS:470113;Parent=Transcript:470113;Name=fgenesh2_kg.1__67__AT1G01630.1 +scaffold_1 JGI_Filtered five_prime_UTR 245271 245459 . - . ID=five_prime_UTR:470113;Parent=Transcript:470113 +scaffold_1 JGI_Filtered gene 246920 248384 . + . ID=fgenesh2_kg.1__69__AT1G01620.1;Name=fgenesh2_kg.1__69__AT1G01620.1 +scaffold_1 JGI_Filtered mRNA 246920 248384 . + . ID=Transcript:470115;Name=Transcript:470115;Parent=fgenesh2_kg.1__69__AT1G01620.1 +scaffold_1 JGI_Filtered five_prime_UTR 246920 246981 . + . ID=five_prime_UTR:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered five_prime_UTR 247013 247037 . + . ID=five_prime_UTR:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered exon 246920 246981 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered exon 247013 247365 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered CDS 247038 247365 . + 0 ID=CDS:470115;Parent=Transcript:470115;Name=fgenesh2_kg.1__69__AT1G01620.1 +scaffold_1 JGI_Filtered exon 247453 247748 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered CDS 247453 247748 . + 1 ID=CDS:470115;Parent=Transcript:470115;Name=fgenesh2_kg.1__69__AT1G01620.1 +scaffold_1 JGI_Filtered exon 247825 247965 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered CDS 247825 247965 . + 0 ID=CDS:470115;Parent=Transcript:470115;Name=fgenesh2_kg.1__69__AT1G01620.1 +scaffold_1 JGI_Filtered exon 248051 248148 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered CDS 248051 248146 . + 0 ID=CDS:470115;Parent=Transcript:470115;Name=fgenesh2_kg.1__69__AT1G01620.1 +scaffold_1 JGI_Filtered exon 248168 248212 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered exon 248240 248256 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered exon 248292 248309 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered exon 248350 248384 . + . ID=exon:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered three_prime_UTR 248147 248148 . + . ID=three_prime_UTR:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered three_prime_UTR 248168 248212 . + . ID=three_prime_UTR:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered three_prime_UTR 248240 248256 . + . ID=three_prime_UTR:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered three_prime_UTR 248292 248309 . + . ID=three_prime_UTR:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered three_prime_UTR 248350 248384 . + . ID=three_prime_UTR:470115;Parent=Transcript:470115 +scaffold_1 JGI_Filtered gene 249785 252308 . + . ID=scaffold_100079.1;Name=scaffold_100079.1 +scaffold_1 JGI_Filtered mRNA 249785 252308 . + . ID=Transcript:918798;Name=Transcript:918798;Parent=scaffold_100079.1 +scaffold_1 JGI_Filtered five_prime_UTR 249785 249804 . + . ID=five_prime_UTR:918798;Parent=Transcript:918798 +scaffold_1 JGI_Filtered exon 249785 250115 . + . ID=exon:918798;Parent=Transcript:918798 +scaffold_1 JGI_Filtered CDS 249805 250115 . + 0 ID=CDS:918798;Parent=Transcript:918798;Name=scaffold_100079.1 +scaffold_1 JGI_Filtered exon 250194 250506 . + . ID=exon:918798;Parent=Transcript:918798 +scaffold_1 JGI_Filtered CDS 250194 250506 . + 2 ID=CDS:918798;Parent=Transcript:918798;Name=scaffold_100079.1 +scaffold_1 JGI_Filtered exon 250999 251473 . + . ID=exon:918798;Parent=Transcript:918798 +scaffold_1 JGI_Filtered CDS 250999 251473 . + 0 ID=CDS:918798;Parent=Transcript:918798;Name=scaffold_100079.1 +scaffold_1 JGI_Filtered exon 251879 252308 . + . ID=exon:918798;Parent=Transcript:918798 +scaffold_1 JGI_Filtered CDS 251879 252288 . + 1 ID=CDS:918798;Parent=Transcript:918798;Name=scaffold_100079.1 +scaffold_1 JGI_Filtered three_prime_UTR 252289 252308 . + . ID=three_prime_UTR:918798;Parent=Transcript:918798 +scaffold_1 JGI_Filtered gene 253000 254805 . - . ID=scaffold_100080.1;Name=scaffold_100080.1 +scaffold_1 JGI_Filtered mRNA 253000 254805 . - . ID=Transcript:918799;Name=Transcript:918799;Parent=scaffold_100080.1 +scaffold_1 JGI_Filtered three_prime_UTR 253000 253019 . - . ID=three_prime_UTR:918799;Parent=Transcript:918799 +scaffold_1 JGI_Filtered exon 253000 254262 . - . ID=exon:918799;Parent=Transcript:918799 +scaffold_1 JGI_Filtered CDS 253020 254262 . - 0 ID=CDS:918799;Parent=Transcript:918799;Name=scaffold_100080.1 +scaffold_1 JGI_Filtered exon 254364 254805 . - . ID=exon:918799;Parent=Transcript:918799 +scaffold_1 JGI_Filtered CDS 254364 254785 . - 1 ID=CDS:918799;Parent=Transcript:918799;Name=scaffold_100080.1 +scaffold_1 JGI_Filtered five_prime_UTR 254786 254805 . - . ID=five_prime_UTR:918799;Parent=Transcript:918799 +scaffold_1 JGI_Filtered gene 262221 265311 . - . ID=Al_scaffold_0001_67;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered mRNA 262221 265311 . - . ID=Transcript:909813;Name=Transcript:909813;Parent=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 262221 262360 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 262221 262360 . - 0 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 262472 263148 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 262472 263148 . - 2 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 263239 263488 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 263239 263488 . - 1 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 263571 263898 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 263571 263898 . - 2 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 263976 264213 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 263976 264213 . - 0 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 264661 264861 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 264661 264861 . - 1 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 264958 265060 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 264958 265060 . - 1 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered exon 265134 265311 . - . ID=exon:909813;Parent=Transcript:909813 +scaffold_1 JGI_Filtered CDS 265134 265311 . - 2 ID=CDS:909813;Parent=Transcript:909813;Name=Al_scaffold_0001_67 +scaffold_1 JGI_Filtered gene 266834 270418 . - . ID=fgenesh2_kg.1__73__AT1G01580.1;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered mRNA 266834 270418 . - . ID=Transcript:470119;Name=Transcript:470119;Parent=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered three_prime_UTR 266834 267070 . - . ID=three_prime_UTR:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered three_prime_UTR 267171 267886 . - . ID=three_prime_UTR:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered three_prime_UTR 268015 268258 . - . ID=three_prime_UTR:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered three_prime_UTR 268350 268677 . - . ID=three_prime_UTR:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered three_prime_UTR 269163 269397 . - . ID=three_prime_UTR:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered three_prime_UTR 269656 269850 . - . ID=three_prime_UTR:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered exon 266834 267070 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered exon 267171 267886 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered CDS 267171 267886 . - 2 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered exon 268015 268258 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered CDS 268015 268258 . - 1 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered exon 268350 268677 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered CDS 268350 268677 . - 2 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered exon 269163 269397 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered CDS 269163 269397 . - 0 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered exon 269656 269850 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered CDS 269656 269850 . - 1 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered exon 269933 270035 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered CDS 269933 270035 . - 1 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered CDS 269933 267070 . - 0 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered exon 270202 270418 . - . ID=exon:470119;Parent=Transcript:470119 +scaffold_1 JGI_Filtered CDS 270202 270418 . - 2 ID=CDS:470119;Parent=Transcript:470119;Name=fgenesh2_kg.1__73__AT1G01580.1 +scaffold_1 JGI_Filtered gene 272408 273876 . - . ID=scaffold_100084.1;Name=scaffold_100084.1 +scaffold_1 JGI_Filtered mRNA 272408 273876 . - . ID=Transcript:918803;Name=Transcript:918803;Parent=scaffold_100084.1 +scaffold_1 JGI_Filtered three_prime_UTR 272408 272428 . - . ID=three_prime_UTR:918803;Parent=Transcript:918803 +scaffold_1 JGI_Filtered exon 272408 273876 . - . ID=exon:918803;Parent=Transcript:918803 +scaffold_1 JGI_Filtered CDS 272429 273856 . - 0 ID=CDS:918803;Parent=Transcript:918803;Name=scaffold_100084.1 +scaffold_1 JGI_Filtered five_prime_UTR 273857 273876 . - . ID=five_prime_UTR:918803;Parent=Transcript:918803 +scaffold_1 JGI_Filtered gene 274075 276522 . - . ID=Al_scaffold_0001_70;Name=Al_scaffold_0001_70 +scaffold_1 JGI_Filtered mRNA 274075 276522 . - . ID=Transcript:909816;Name=Transcript:909816;Parent=Al_scaffold_0001_70 +scaffold_1 JGI_Filtered exon 274075 274185 . - . ID=exon:909816;Parent=Transcript:909816 +scaffold_1 JGI_Filtered CDS 274075 274185 . - 0 ID=CDS:909816;Parent=Transcript:909816;Name=Al_scaffold_0001_70 +scaffold_1 JGI_Filtered exon 274278 274826 . - . ID=exon:909816;Parent=Transcript:909816 +scaffold_1 JGI_Filtered CDS 274278 274826 . - 0 ID=CDS:909816;Parent=Transcript:909816;Name=Al_scaffold_0001_70 +scaffold_1 JGI_Filtered exon 275650 276522 . - . ID=exon:909816;Parent=Transcript:909816 +scaffold_1 JGI_Filtered CDS 275650 276522 . - 0 ID=CDS:909816;Parent=Transcript:909816;Name=Al_scaffold_0001_70 +scaffold_1 JGI_Filtered gene 281840 283744 . - . ID=scaffold_100086.1;Name=scaffold_100086.1 +scaffold_1 JGI_Filtered mRNA 281840 283744 . - . ID=Transcript:918805;Name=Transcript:918805;Parent=scaffold_100086.1 +scaffold_1 JGI_Filtered three_prime_UTR 281840 281860 . - . ID=three_prime_UTR:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered exon 281840 282030 . - . ID=exon:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered CDS 281861 282030 . - 0 ID=CDS:918805;Parent=Transcript:918805;Name=scaffold_100086.1 +scaffold_1 JGI_Filtered exon 282111 282339 . - . ID=exon:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered CDS 282111 282339 . - 2 ID=CDS:918805;Parent=Transcript:918805;Name=scaffold_100086.1 +scaffold_1 JGI_Filtered exon 282464 282796 . - . ID=exon:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered CDS 282464 282796 . - 0 ID=CDS:918805;Parent=Transcript:918805;Name=scaffold_100086.1 +scaffold_1 JGI_Filtered exon 282977 283114 . - . ID=exon:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered CDS 282977 283114 . - 0 ID=CDS:918805;Parent=Transcript:918805;Name=scaffold_100086.1 +scaffold_1 JGI_Filtered exon 283204 283333 . - . ID=exon:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered CDS 283204 283333 . - 0 ID=CDS:918805;Parent=Transcript:918805;Name=scaffold_100086.1 +scaffold_1 JGI_Filtered exon 283561 283744 . - . ID=exon:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered CDS 283561 283724 . - 1 ID=CDS:918805;Parent=Transcript:918805;Name=scaffold_100086.1 +scaffold_1 JGI_Filtered five_prime_UTR 283725 283744 . - . ID=five_prime_UTR:918805;Parent=Transcript:918805 +scaffold_1 JGI_Filtered gene 284339 286433 . - . ID=fgenesh2_kg.1__78__AT1G01550.1;Name=fgenesh2_kg.1__78__AT1G01550.1 +scaffold_1 JGI_Filtered mRNA 284339 286433 . - . ID=Transcript:470124;Name=Transcript:470124;Parent=fgenesh2_kg.1__78__AT1G01550.1 +scaffold_1 JGI_Filtered three_prime_UTR 284339 284402 . - . ID=three_prime_UTR:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered three_prime_UTR 284418 284501 . - . ID=three_prime_UTR:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered exon 284339 284402 . - . ID=exon:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered exon 284418 285568 . - . ID=exon:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered CDS 284502 285551 . - 0 ID=CDS:470124;Parent=Transcript:470124;Name=fgenesh2_kg.1__78__AT1G01550.1 +scaffold_1 JGI_Filtered exon 286134 286190 . - . ID=exon:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered exon 286222 286234 . - . ID=exon:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered exon 286256 286264 . - . ID=exon:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered exon 286342 286433 . - . ID=exon:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered five_prime_UTR 285552 285568 . - . ID=five_prime_UTR:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered five_prime_UTR 286134 286190 . - . ID=five_prime_UTR:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered five_prime_UTR 286222 286234 . - . ID=five_prime_UTR:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered five_prime_UTR 286256 286264 . - . ID=five_prime_UTR:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered five_prime_UTR 286342 286433 . - . ID=five_prime_UTR:470124;Parent=Transcript:470124 +scaffold_1 JGI_Filtered gene 287793 290675 . - . ID=fgenesh2_kg.1__79__AT1G01540.2;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered mRNA 287793 290675 . - . ID=Transcript:470125;Name=Transcript:470125;Parent=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered three_prime_UTR 287793 287833 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered three_prime_UTR 287851 288049 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered three_prime_UTR 288077 288201 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered three_prime_UTR 288287 288496 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered three_prime_UTR 288582 288711 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered three_prime_UTR 288815 288985 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered three_prime_UTR 289077 289199 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered three_prime_UTR 289283 289387 . - . ID=three_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered exon 287793 287833 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered exon 287851 288049 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered exon 288077 288201 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered exon 288287 288496 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered CDS 288287 288496 . - 0 ID=CDS:470125;Parent=Transcript:470125;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered exon 288582 288711 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered CDS 288582 288711 . - 0 ID=CDS:470125;Parent=Transcript:470125;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered exon 288815 288985 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered CDS 288815 288985 . - 1 ID=CDS:470125;Parent=Transcript:470125;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered exon 289077 289199 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered CDS 289077 289199 . - 1 ID=CDS:470125;Parent=Transcript:470125;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered exon 289283 289387 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered CDS 289283 289387 . - 1 ID=CDS:470125;Parent=Transcript:470125;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered exon 289905 290675 . - . ID=exon:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered CDS 289905 290467 . - 1 ID=CDS:470125;Parent=Transcript:470125;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered CDS 289905 288201 . - 0 ID=CDS:470125;Parent=Transcript:470125;Name=fgenesh2_kg.1__79__AT1G01540.2 +scaffold_1 JGI_Filtered five_prime_UTR 290468 290675 . - . ID=five_prime_UTR:470125;Parent=Transcript:470125 +scaffold_1 JGI_Filtered gene 291348 291764 . - . ID=scaffold_100090.1;Name=scaffold_100090.1 +scaffold_1 JGI_Filtered mRNA 291348 291764 . - . ID=Transcript:918809;Name=Transcript:918809;Parent=scaffold_100090.1 +scaffold_1 JGI_Filtered three_prime_UTR 291348 291367 . - . ID=three_prime_UTR:918809;Parent=Transcript:918809 +scaffold_1 JGI_Filtered exon 291348 291764 . - . ID=exon:918809;Parent=Transcript:918809 +scaffold_1 JGI_Filtered CDS 291368 291742 . - 0 ID=CDS:918809;Parent=Transcript:918809;Name=scaffold_100090.1 +scaffold_1 JGI_Filtered five_prime_UTR 291743 291764 . - . ID=five_prime_UTR:918809;Parent=Transcript:918809 +scaffold_1 JGI_Filtered gene 292057 292705 . - . ID=fgenesh1_pg.C_scaffold_1000067;Name=fgenesh1_pg.C_scaffold_1000067 +scaffold_1 JGI_Filtered mRNA 292057 292705 . - . ID=Transcript:333502;Name=Transcript:333502;Parent=fgenesh1_pg.C_scaffold_1000067 +scaffold_1 JGI_Filtered exon 292057 292110 . - . ID=exon:333502;Parent=Transcript:333502 +scaffold_1 JGI_Filtered CDS 292057 292110 . - 0 ID=CDS:333502;Parent=Transcript:333502;Name=fgenesh1_pg.C_scaffold_1000067 +scaffold_1 JGI_Filtered exon 292335 292494 . - . ID=exon:333502;Parent=Transcript:333502 +scaffold_1 JGI_Filtered CDS 292335 292494 . - 0 ID=CDS:333502;Parent=Transcript:333502;Name=fgenesh1_pg.C_scaffold_1000067 +scaffold_1 JGI_Filtered exon 292569 292705 . - . ID=exon:333502;Parent=Transcript:333502 +scaffold_1 JGI_Filtered CDS 292569 292705 . - 1 ID=CDS:333502;Parent=Transcript:333502;Name=fgenesh1_pg.C_scaffold_1000067 +scaffold_1 JGI_Filtered gene 294198 295303 . + . ID=Al_scaffold_0001_74;Name=Al_scaffold_0001_74 +scaffold_1 JGI_Filtered mRNA 294198 295303 . + . ID=Transcript:909820;Name=Transcript:909820;Parent=Al_scaffold_0001_74 +scaffold_1 JGI_Filtered exon 294198 294509 . + . ID=exon:909820;Parent=Transcript:909820 +scaffold_1 JGI_Filtered CDS 294198 294509 . + 0 ID=CDS:909820;Parent=Transcript:909820;Name=Al_scaffold_0001_74 +scaffold_1 JGI_Filtered exon 294872 295303 . + . ID=exon:909820;Parent=Transcript:909820 +scaffold_1 JGI_Filtered CDS 294872 295303 . + 0 ID=CDS:909820;Parent=Transcript:909820;Name=Al_scaffold_0001_74 +scaffold_1 JGI_Filtered gene 295990 304406 . - . ID=fgenesh1_pm.C_scaffold_1000066;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered mRNA 295990 304406 . - . ID=Transcript:311286;Name=Transcript:311286;Parent=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 295990 296022 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 295990 296022 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 296129 296188 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 296129 296188 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 296267 296376 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 296267 296376 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 296485 296601 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 296485 296601 . - 2 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 296708 296849 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 296708 296849 . - 2 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 296968 297025 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 296968 297025 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 297143 297399 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 297143 297399 . - 1 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 297822 297910 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 297822 297910 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 298183 298231 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 298183 298231 . - 2 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 298331 298444 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 298331 298444 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 298535 298582 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 298535 298582 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 298690 299481 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 298690 299481 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 299602 299732 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 299602 299732 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 299849 300014 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 299849 300014 . - 2 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 300199 300802 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 300199 300802 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 303062 303285 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 303062 303285 . - 1 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered exon 303654 304406 . - . ID=exon:311286;Parent=Transcript:311286 +scaffold_1 JGI_Filtered CDS 303654 304406 . - 0 ID=CDS:311286;Parent=Transcript:311286;Name=fgenesh1_pm.C_scaffold_1000066 +scaffold_1 JGI_Filtered gene 308924 310761 . + . ID=scaffold_100095.1;Name=scaffold_100095.1 +scaffold_1 JGI_Filtered mRNA 308924 310761 . + . ID=Transcript:918814;Name=Transcript:918814;Parent=scaffold_100095.1 +scaffold_1 JGI_Filtered five_prime_UTR 308924 308943 . + . ID=five_prime_UTR:918814;Parent=Transcript:918814 +scaffold_1 JGI_Filtered exon 308924 308949 . + . ID=exon:918814;Parent=Transcript:918814 +scaffold_1 JGI_Filtered CDS 308944 308949 . + 0 ID=CDS:918814;Parent=Transcript:918814;Name=scaffold_100095.1 +scaffold_1 JGI_Filtered exon 309646 309721 . + . ID=exon:918814;Parent=Transcript:918814 +scaffold_1 JGI_Filtered CDS 309646 309721 . + 0 ID=CDS:918814;Parent=Transcript:918814;Name=scaffold_100095.1 +scaffold_1 JGI_Filtered exon 310286 310761 . + . ID=exon:918814;Parent=Transcript:918814 +scaffold_1 JGI_Filtered CDS 310286 310737 . + 1 ID=CDS:918814;Parent=Transcript:918814;Name=scaffold_100095.1 +scaffold_1 JGI_Filtered three_prime_UTR 310738 310761 . + . ID=three_prime_UTR:918814;Parent=Transcript:918814 +scaffold_1 JGI_Filtered gene 313347 315496 . - . ID=scaffold_100096.1;Name=scaffold_100096.1 +scaffold_1 JGI_Filtered mRNA 313347 315496 . - . ID=Transcript:918815;Name=Transcript:918815;Parent=scaffold_100096.1 +scaffold_1 JGI_Filtered three_prime_UTR 313347 313367 . - . ID=three_prime_UTR:918815;Parent=Transcript:918815 +scaffold_1 JGI_Filtered exon 313347 314394 . - . ID=exon:918815;Parent=Transcript:918815 +scaffold_1 JGI_Filtered CDS 313368 314394 . - 0 ID=CDS:918815;Parent=Transcript:918815;Name=scaffold_100096.1 +scaffold_1 JGI_Filtered exon 314662 314822 . - . ID=exon:918815;Parent=Transcript:918815 +scaffold_1 JGI_Filtered CDS 314662 314822 . - 1 ID=CDS:918815;Parent=Transcript:918815;Name=scaffold_100096.1 +scaffold_1 JGI_Filtered exon 315054 315185 . - . ID=exon:918815;Parent=Transcript:918815 +scaffold_1 JGI_Filtered CDS 315054 315185 . - 0 ID=CDS:918815;Parent=Transcript:918815;Name=scaffold_100096.1 +scaffold_1 JGI_Filtered exon 315306 315496 . - . ID=exon:918815;Parent=Transcript:918815 +scaffold_1 JGI_Filtered CDS 315306 315476 . - 0 ID=CDS:918815;Parent=Transcript:918815;Name=scaffold_100096.1 +scaffold_1 JGI_Filtered five_prime_UTR 315477 315496 . - . ID=five_prime_UTR:918815;Parent=Transcript:918815 +scaffold_1 JGI_Filtered gene 318441 319257 . + . ID=fgenesh1_pg.C_scaffold_1000073;Name=fgenesh1_pg.C_scaffold_1000073 +scaffold_1 JGI_Filtered mRNA 318441 319257 . + . ID=Transcript:333508;Name=Transcript:333508;Parent=fgenesh1_pg.C_scaffold_1000073 +scaffold_1 JGI_Filtered exon 318441 318646 . + . ID=exon:333508;Parent=Transcript:333508 +scaffold_1 JGI_Filtered CDS 318441 318646 . + 0 ID=CDS:333508;Parent=Transcript:333508;Name=fgenesh1_pg.C_scaffold_1000073 +scaffold_1 JGI_Filtered exon 319008 319257 . + . ID=exon:333508;Parent=Transcript:333508 +scaffold_1 JGI_Filtered CDS 319008 319257 . + 2 ID=CDS:333508;Parent=Transcript:333508;Name=fgenesh1_pg.C_scaffold_1000073 +scaffold_1 JGI_Filtered gene 321884 322760 . - . ID=Al_scaffold_0001_82;Name=Al_scaffold_0001_82 +scaffold_1 JGI_Filtered mRNA 321884 322760 . - . ID=Transcript:909828;Name=Transcript:909828;Parent=Al_scaffold_0001_82 +scaffold_1 JGI_Filtered exon 321884 321930 . - . ID=exon:909828;Parent=Transcript:909828 +scaffold_1 JGI_Filtered CDS 321884 321930 . - 0 ID=CDS:909828;Parent=Transcript:909828;Name=Al_scaffold_0001_82 +scaffold_1 JGI_Filtered exon 322018 322117 . - . ID=exon:909828;Parent=Transcript:909828 +scaffold_1 JGI_Filtered CDS 322018 322117 . - 2 ID=CDS:909828;Parent=Transcript:909828;Name=Al_scaffold_0001_82 +scaffold_1 JGI_Filtered exon 322200 322291 . - . ID=exon:909828;Parent=Transcript:909828 +scaffold_1 JGI_Filtered CDS 322200 322291 . - 0 ID=CDS:909828;Parent=Transcript:909828;Name=Al_scaffold_0001_82 +scaffold_1 JGI_Filtered exon 322372 322501 . - . ID=exon:909828;Parent=Transcript:909828 +scaffold_1 JGI_Filtered CDS 322372 322501 . - 2 ID=CDS:909828;Parent=Transcript:909828;Name=Al_scaffold_0001_82 +scaffold_1 JGI_Filtered exon 322572 322760 . - . ID=exon:909828;Parent=Transcript:909828 +scaffold_1 JGI_Filtered CDS 322572 322760 . - 0 ID=CDS:909828;Parent=Transcript:909828;Name=Al_scaffold_0001_82 +scaffold_1 JGI_Filtered gene 324353 326366 . - . ID=fgenesh1_pm.C_scaffold_1000070;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered mRNA 324353 326366 . - . ID=Transcript:311290;Name=Transcript:311290;Parent=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 324353 324656 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 324353 324656 . - 0 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 324747 324885 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 324747 324885 . - 1 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 324997 325089 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 324997 325089 . - 2 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 325185 325232 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 325185 325232 . - 2 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 325314 325405 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 325314 325405 . - 2 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 325486 325673 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 325486 325673 . - 1 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 325786 325896 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 325786 325896 . - 0 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 325977 326139 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 325977 326139 . - 0 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered exon 326224 326366 . - . ID=exon:311290;Parent=Transcript:311290 +scaffold_1 JGI_Filtered CDS 326224 326366 . - 1 ID=CDS:311290;Parent=Transcript:311290;Name=fgenesh1_pm.C_scaffold_1000070 +scaffold_1 JGI_Filtered gene 328181 328380 . + . ID=scaffold_100100.1;Name=scaffold_100100.1 +scaffold_1 JGI_Filtered mRNA 328181 328380 . + . ID=Transcript:918819;Name=Transcript:918819;Parent=scaffold_100100.1 +scaffold_1 JGI_Filtered five_prime_UTR 328181 328201 . + . ID=five_prime_UTR:918819;Parent=Transcript:918819 +scaffold_1 JGI_Filtered exon 328181 328380 . + . ID=exon:918819;Parent=Transcript:918819 +scaffold_1 JGI_Filtered CDS 328202 328360 . + 0 ID=CDS:918819;Parent=Transcript:918819;Name=scaffold_100100.1 +scaffold_1 JGI_Filtered three_prime_UTR 328361 328380 . + . ID=three_prime_UTR:918819;Parent=Transcript:918819 +scaffold_1 JGI_Filtered gene 330470 334264 . + . ID=Al_scaffold_0001_84;Name=Al_scaffold_0001_84 +scaffold_1 JGI_Filtered mRNA 330470 334264 . + . ID=Transcript:909830;Name=Transcript:909830;Parent=Al_scaffold_0001_84 +scaffold_1 JGI_Filtered exon 330470 331254 . + . ID=exon:909830;Parent=Transcript:909830 +scaffold_1 JGI_Filtered CDS 330470 331254 . + 0 ID=CDS:909830;Parent=Transcript:909830;Name=Al_scaffold_0001_84 +scaffold_1 JGI_Filtered exon 332070 334030 . + . ID=exon:909830;Parent=Transcript:909830 +scaffold_1 JGI_Filtered CDS 332070 334030 . + 2 ID=CDS:909830;Parent=Transcript:909830;Name=Al_scaffold_0001_84 +scaffold_1 JGI_Filtered exon 334098 334264 . + . ID=exon:909830;Parent=Transcript:909830 +scaffold_1 JGI_Filtered CDS 334098 334264 . + 1 ID=CDS:909830;Parent=Transcript:909830;Name=Al_scaffold_0001_84 +scaffold_1 JGI_Filtered gene 335605 336924 . - . ID=fgenesh1_pg.C_scaffold_1000078;Name=fgenesh1_pg.C_scaffold_1000078 +scaffold_1 JGI_Filtered mRNA 335605 336924 . - . ID=Transcript:333513;Name=Transcript:333513;Parent=fgenesh1_pg.C_scaffold_1000078 +scaffold_1 JGI_Filtered exon 335605 335733 . - . ID=exon:333513;Parent=Transcript:333513 +scaffold_1 JGI_Filtered CDS 335605 335733 . - 0 ID=CDS:333513;Parent=Transcript:333513;Name=fgenesh1_pg.C_scaffold_1000078 +scaffold_1 JGI_Filtered exon 336050 336431 . - . ID=exon:333513;Parent=Transcript:333513 +scaffold_1 JGI_Filtered CDS 336050 336431 . - 0 ID=CDS:333513;Parent=Transcript:333513;Name=fgenesh1_pg.C_scaffold_1000078 +scaffold_1 JGI_Filtered exon 336485 336924 . - . ID=exon:333513;Parent=Transcript:333513 +scaffold_1 JGI_Filtered CDS 336485 336924 . - 1 ID=CDS:333513;Parent=Transcript:333513;Name=fgenesh1_pg.C_scaffold_1000078 +scaffold_1 JGI_Filtered gene 339353 341720 . + . ID=scaffold_100104.1;Name=scaffold_100104.1 +scaffold_1 JGI_Filtered mRNA 339353 341720 . + . ID=Transcript:918823;Name=Transcript:918823;Parent=scaffold_100104.1 +scaffold_1 JGI_Filtered five_prime_UTR 339353 339379 . + . ID=five_prime_UTR:918823;Parent=Transcript:918823 +scaffold_1 JGI_Filtered exon 339353 341028 . + . ID=exon:918823;Parent=Transcript:918823 +scaffold_1 JGI_Filtered CDS 339380 341028 . + 0 ID=CDS:918823;Parent=Transcript:918823;Name=scaffold_100104.1 +scaffold_1 JGI_Filtered exon 341121 341181 . + . ID=exon:918823;Parent=Transcript:918823 +scaffold_1 JGI_Filtered CDS 341121 341181 . + 2 ID=CDS:918823;Parent=Transcript:918823;Name=scaffold_100104.1 +scaffold_1 JGI_Filtered exon 341325 341548 . + . ID=exon:918823;Parent=Transcript:918823 +scaffold_1 JGI_Filtered CDS 341325 341548 . + 0 ID=CDS:918823;Parent=Transcript:918823;Name=scaffold_100104.1 +scaffold_1 JGI_Filtered exon 341643 341720 . + . ID=exon:918823;Parent=Transcript:918823 +scaffold_1 JGI_Filtered CDS 341643 341700 . + 2 ID=CDS:918823;Parent=Transcript:918823;Name=scaffold_100104.1 +scaffold_1 JGI_Filtered three_prime_UTR 341701 341720 . + . ID=three_prime_UTR:918823;Parent=Transcript:918823 +scaffold_1 JGI_Filtered gene 343263 345197 . + . ID=fgenesh2_kg.1__91__AT1G01430.1;Name=fgenesh2_kg.1__91__AT1G01430.1 +scaffold_1 JGI_Filtered mRNA 343263 345197 . + . ID=Transcript:470137;Name=Transcript:470137;Parent=fgenesh2_kg.1__91__AT1G01430.1 +scaffold_1 JGI_Filtered five_prime_UTR 343263 343349 . + . ID=five_prime_UTR:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered five_prime_UTR 343360 343372 . + . ID=five_prime_UTR:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered exon 343263 343349 . + . ID=exon:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered exon 343360 343637 . + . ID=exon:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered CDS 343373 343637 . + 0 ID=CDS:470137;Parent=Transcript:470137;Name=fgenesh2_kg.1__91__AT1G01430.1 +scaffold_1 JGI_Filtered exon 343801 344084 . + . ID=exon:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered CDS 343801 344084 . + 1 ID=CDS:470137;Parent=Transcript:470137;Name=fgenesh2_kg.1__91__AT1G01430.1 +scaffold_1 JGI_Filtered exon 344162 344972 . + . ID=exon:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered CDS 344162 344959 . + 0 ID=CDS:470137;Parent=Transcript:470137;Name=fgenesh2_kg.1__91__AT1G01430.1 +scaffold_1 JGI_Filtered exon 345058 345197 . + . ID=exon:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered three_prime_UTR 344960 344972 . + . ID=three_prime_UTR:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered three_prime_UTR 345058 345197 . + . ID=three_prime_UTR:470137;Parent=Transcript:470137 +scaffold_1 JGI_Filtered gene 354524 356040 . + . ID=fgenesh2_kg.1__92__AT1G01420.1;Name=fgenesh2_kg.1__92__AT1G01420.1 +scaffold_1 JGI_Filtered mRNA 354524 356040 . + . ID=Transcript:470138;Name=Transcript:470138;Parent=fgenesh2_kg.1__92__AT1G01420.1 +scaffold_1 JGI_Filtered exon 354524 355756 . + . ID=exon:470138;Parent=Transcript:470138 +scaffold_1 JGI_Filtered CDS 354524 355756 . + 0 ID=CDS:470138;Parent=Transcript:470138;Name=fgenesh2_kg.1__92__AT1G01420.1 +scaffold_1 JGI_Filtered exon 355814 355948 . + . ID=exon:470138;Parent=Transcript:470138 +scaffold_1 JGI_Filtered CDS 355814 355948 . + 0 ID=CDS:470138;Parent=Transcript:470138;Name=fgenesh2_kg.1__92__AT1G01420.1 +scaffold_1 JGI_Filtered exon 355969 356040 . + . ID=exon:470138;Parent=Transcript:470138 +scaffold_1 JGI_Filtered three_prime_UTR 355969 356040 . + . ID=three_prime_UTR:470138;Parent=Transcript:470138 +scaffold_1 JGI_Filtered gene 356318 357400 . - . ID=fgenesh2_kg.1__93__AT1G01410.1;Name=fgenesh2_kg.1__93__AT1G01410.1 +scaffold_1 JGI_Filtered mRNA 356318 357400 . - . ID=Transcript:470139;Name=Transcript:470139;Parent=fgenesh2_kg.1__93__AT1G01410.1 +scaffold_1 JGI_Filtered three_prime_UTR 356318 357044 . - . ID=three_prime_UTR:470139;Parent=Transcript:470139 +scaffold_1 JGI_Filtered exon 356318 357044 . - . ID=exon:470139;Parent=Transcript:470139 +scaffold_1 JGI_Filtered exon 357072 357400 . - . ID=exon:470139;Parent=Transcript:470139 +scaffold_1 JGI_Filtered CDS 357072 357400 . - 1 ID=CDS:470139;Parent=Transcript:470139;Name=fgenesh2_kg.1__93__AT1G01410.1 +scaffold_1 JGI_Filtered CDS 357072 357044 . - 0 ID=CDS:470139;Parent=Transcript:470139;Name=fgenesh2_kg.1__93__AT1G01410.1 +scaffold_1 JGI_Filtered gene 359044 360465 . + . ID=fgenesh1_pg.C_scaffold_1000083;Name=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered mRNA 359044 360465 . + . ID=Transcript:333518;Name=Transcript:333518;Parent=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered exon 359044 359107 . + . ID=exon:333518;Parent=Transcript:333518 +scaffold_1 JGI_Filtered CDS 359044 359107 . + 0 ID=CDS:333518;Parent=Transcript:333518;Name=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered exon 359198 359268 . + . ID=exon:333518;Parent=Transcript:333518 +scaffold_1 JGI_Filtered CDS 359198 359268 . + 1 ID=CDS:333518;Parent=Transcript:333518;Name=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered exon 359353 359532 . + . ID=exon:333518;Parent=Transcript:333518 +scaffold_1 JGI_Filtered CDS 359353 359532 . + 0 ID=CDS:333518;Parent=Transcript:333518;Name=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered exon 359625 359918 . + . ID=exon:333518;Parent=Transcript:333518 +scaffold_1 JGI_Filtered CDS 359625 359918 . + 0 ID=CDS:333518;Parent=Transcript:333518;Name=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered exon 360006 360098 . + . ID=exon:333518;Parent=Transcript:333518 +scaffold_1 JGI_Filtered CDS 360006 360098 . + 0 ID=CDS:333518;Parent=Transcript:333518;Name=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered exon 360202 360465 . + . ID=exon:333518;Parent=Transcript:333518 +scaffold_1 JGI_Filtered CDS 360202 360465 . + 0 ID=CDS:333518;Parent=Transcript:333518;Name=fgenesh1_pg.C_scaffold_1000083 +scaffold_1 JGI_Filtered gene 362930 364545 . + . ID=fgenesh2_kg.1__94__AT1G01390.1;Name=fgenesh2_kg.1__94__AT1G01390.1 +scaffold_1 JGI_Filtered mRNA 362930 364545 . + . ID=Transcript:470140;Name=Transcript:470140;Parent=fgenesh2_kg.1__94__AT1G01390.1 +scaffold_1 JGI_Filtered five_prime_UTR 362930 362941 . + . ID=five_prime_UTR:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered exon 362930 364384 . + . ID=exon:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered CDS 362942 364384 . + 0 ID=CDS:470140;Parent=Transcript:470140;Name=fgenesh2_kg.1__94__AT1G01390.1 +scaffold_1 JGI_Filtered exon 364404 364418 . + . ID=exon:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered exon 364431 364504 . + . ID=exon:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered exon 364518 364545 . + . ID=exon:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered three_prime_UTR 364404 364418 . + . ID=three_prime_UTR:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered three_prime_UTR 364431 364504 . + . ID=three_prime_UTR:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered three_prime_UTR 364518 364545 . + . ID=three_prime_UTR:470140;Parent=Transcript:470140 +scaffold_1 JGI_Filtered gene 365041 365523 . - . ID=Al_scaffold_0001_92;Name=Al_scaffold_0001_92 +scaffold_1 JGI_Filtered mRNA 365041 365523 . - . ID=Transcript:909838;Name=Transcript:909838;Parent=Al_scaffold_0001_92 +scaffold_1 JGI_Filtered exon 365041 365137 . - . ID=exon:909838;Parent=Transcript:909838 +scaffold_1 JGI_Filtered CDS 365041 365137 . - 0 ID=CDS:909838;Parent=Transcript:909838;Name=Al_scaffold_0001_92 +scaffold_1 JGI_Filtered exon 365248 365335 . - . ID=exon:909838;Parent=Transcript:909838 +scaffold_1 JGI_Filtered CDS 365248 365335 . - 1 ID=CDS:909838;Parent=Transcript:909838;Name=Al_scaffold_0001_92 +scaffold_1 JGI_Filtered exon 365457 365523 . - . ID=exon:909838;Parent=Transcript:909838 +scaffold_1 JGI_Filtered CDS 365457 365523 . - 2 ID=CDS:909838;Parent=Transcript:909838;Name=Al_scaffold_0001_92 +scaffold_1 JGI_Filtered gene 367696 369417 . - . ID=Al_scaffold_0001_93;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered mRNA 367696 369417 . - . ID=Transcript:909839;Name=Transcript:909839;Parent=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered three_prime_UTR 367696 367751 . - . ID=three_prime_UTR:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered exon 367696 367751 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered exon 367891 367966 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered CDS 367891 367966 . - 2 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered CDS 367891 367751 . - 0 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered exon 368107 368184 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered CDS 368107 368184 . - 0 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered exon 368601 368705 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered CDS 368601 368705 . - 0 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered exon 368908 368942 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered CDS 368908 368942 . - 0 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered exon 369064 369109 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered CDS 369064 369109 . - 2 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered exon 369210 369307 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered CDS 369210 369307 . - 0 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered exon 369366 369417 . - . ID=exon:909839;Parent=Transcript:909839 +scaffold_1 JGI_Filtered CDS 369366 369417 . - 2 ID=CDS:909839;Parent=Transcript:909839;Name=Al_scaffold_0001_93 +scaffold_1 JGI_Filtered gene 370308 371114 . - . ID=Al_scaffold_0001_94;Name=Al_scaffold_0001_94 +scaffold_1 JGI_Filtered mRNA 370308 371114 . - . ID=Transcript:909840;Name=Transcript:909840;Parent=Al_scaffold_0001_94 +scaffold_1 JGI_Filtered exon 370308 370520 . - . ID=exon:909840;Parent=Transcript:909840 +scaffold_1 JGI_Filtered CDS 370308 370520 . - 0 ID=CDS:909840;Parent=Transcript:909840;Name=Al_scaffold_0001_94 +scaffold_1 JGI_Filtered exon 370615 370830 . - . ID=exon:909840;Parent=Transcript:909840 +scaffold_1 JGI_Filtered CDS 370615 370830 . - 0 ID=CDS:909840;Parent=Transcript:909840;Name=Al_scaffold_0001_94 +scaffold_1 JGI_Filtered exon 370971 371114 . - . ID=exon:909840;Parent=Transcript:909840 +scaffold_1 JGI_Filtered CDS 370971 371114 . - 0 ID=CDS:909840;Parent=Transcript:909840;Name=Al_scaffold_0001_94 +scaffold_1 JGI_Filtered gene 373723 374582 . - . ID=scaffold_100113.1;Name=scaffold_100113.1 +scaffold_1 JGI_Filtered mRNA 373723 374582 . - . ID=Transcript:918832;Name=Transcript:918832;Parent=scaffold_100113.1 +scaffold_1 JGI_Filtered three_prime_UTR 373723 373742 . - . ID=three_prime_UTR:918832;Parent=Transcript:918832 +scaffold_1 JGI_Filtered exon 373723 373764 . - . ID=exon:918832;Parent=Transcript:918832 +scaffold_1 JGI_Filtered CDS 373743 373764 . - 0 ID=CDS:918832;Parent=Transcript:918832;Name=scaffold_100113.1 +scaffold_1 JGI_Filtered exon 373971 374226 . - . ID=exon:918832;Parent=Transcript:918832 +scaffold_1 JGI_Filtered CDS 373971 374226 . - 1 ID=CDS:918832;Parent=Transcript:918832;Name=scaffold_100113.1 +scaffold_1 JGI_Filtered exon 374313 374582 . - . ID=exon:918832;Parent=Transcript:918832 +scaffold_1 JGI_Filtered CDS 374313 374562 . - 2 ID=CDS:918832;Parent=Transcript:918832;Name=scaffold_100113.1 +scaffold_1 JGI_Filtered five_prime_UTR 374563 374582 . - . ID=five_prime_UTR:918832;Parent=Transcript:918832 +scaffold_1 JGI_Filtered gene 374911 376187 . - . ID=scaffold_100114.1;Name=scaffold_100114.1 +scaffold_1 JGI_Filtered mRNA 374911 376187 . - . ID=Transcript:918833;Name=Transcript:918833;Parent=scaffold_100114.1 +scaffold_1 JGI_Filtered three_prime_UTR 374911 374930 . - . ID=three_prime_UTR:918833;Parent=Transcript:918833 +scaffold_1 JGI_Filtered exon 374911 375053 . - . ID=exon:918833;Parent=Transcript:918833 +scaffold_1 JGI_Filtered CDS 374931 375053 . - 0 ID=CDS:918833;Parent=Transcript:918833;Name=scaffold_100114.1 +scaffold_1 JGI_Filtered exon 375137 375957 . - . ID=exon:918833;Parent=Transcript:918833 +scaffold_1 JGI_Filtered CDS 375137 375957 . - 0 ID=CDS:918833;Parent=Transcript:918833;Name=scaffold_100114.1 +scaffold_1 JGI_Filtered exon 376078 376187 . - . ID=exon:918833;Parent=Transcript:918833 +scaffold_1 JGI_Filtered CDS 376078 376162 . - 2 ID=CDS:918833;Parent=Transcript:918833;Name=scaffold_100114.1 +scaffold_1 JGI_Filtered five_prime_UTR 376163 376187 . - . ID=five_prime_UTR:918833;Parent=Transcript:918833 +scaffold_1 JGI_Filtered gene 377570 380538 . + . ID=fgenesh2_kg.1__95__AT1G01340.1;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered mRNA 377570 380538 . + . ID=Transcript:470141;Name=Transcript:470141;Parent=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered five_prime_UTR 377570 377751 . + . ID=five_prime_UTR:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered exon 377570 377751 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered exon 377764 378300 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered CDS 377764 378300 . + 0 ID=CDS:470141;Parent=Transcript:470141;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered exon 378373 378585 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered CDS 378373 378585 . + 0 ID=CDS:470141;Parent=Transcript:470141;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered exon 378668 378963 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered CDS 378668 378963 . + 0 ID=CDS:470141;Parent=Transcript:470141;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered exon 379173 379284 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered CDS 379173 379284 . + 2 ID=CDS:470141;Parent=Transcript:470141;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered exon 379362 379598 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered CDS 379362 379598 . + 0 ID=CDS:470141;Parent=Transcript:470141;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered exon 379694 380088 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered CDS 379694 380088 . + 0 ID=CDS:470141;Parent=Transcript:470141;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered exon 380169 380538 . + . ID=exon:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered CDS 380169 380499 . + 2 ID=CDS:470141;Parent=Transcript:470141;Name=fgenesh2_kg.1__95__AT1G01340.1 +scaffold_1 JGI_Filtered three_prime_UTR 380500 380538 . + . ID=three_prime_UTR:470141;Parent=Transcript:470141 +scaffold_1 JGI_Filtered gene 383180 383629 . + . ID=scaffold_100116.1;Name=scaffold_100116.1 +scaffold_1 JGI_Filtered mRNA 383180 383629 . + . ID=Transcript:918835;Name=Transcript:918835;Parent=scaffold_100116.1 +scaffold_1 JGI_Filtered five_prime_UTR 383180 383202 . + . ID=five_prime_UTR:918835;Parent=Transcript:918835 +scaffold_1 JGI_Filtered exon 383180 383240 . + . ID=exon:918835;Parent=Transcript:918835 +scaffold_1 JGI_Filtered CDS 383203 383240 . + 0 ID=CDS:918835;Parent=Transcript:918835;Name=scaffold_100116.1 +scaffold_1 JGI_Filtered exon 383288 383629 . + . ID=exon:918835;Parent=Transcript:918835 +scaffold_1 JGI_Filtered CDS 383288 383606 . + 2 ID=CDS:918835;Parent=Transcript:918835;Name=scaffold_100116.1 +scaffold_1 JGI_Filtered three_prime_UTR 383607 383629 . + . ID=three_prime_UTR:918835;Parent=Transcript:918835 +scaffold_1 JGI_Filtered gene 389375 398395 . + . ID=fgenesh2_kg.1__96__AT1G01320.1;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered mRNA 389375 398395 . + . ID=Transcript:470142;Name=Transcript:470142;Parent=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 389375 389435 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 389375 389435 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 389577 389638 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 389577 389638 . + 1 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 390416 390508 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 390416 390508 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 390923 390995 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 390923 390995 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 391164 391448 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 391164 391448 . + 1 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 391541 391608 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 391541 391608 . + 1 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 391709 391840 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 391709 391840 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 391933 391974 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 391933 391974 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 392052 392573 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 392052 392573 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 392674 392825 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 392674 392825 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 392917 393430 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 392917 393430 . + 2 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 393509 393571 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 393509 393571 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 393660 393761 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 393660 393761 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 393849 394175 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 393849 394175 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 394275 394367 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 394275 394367 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 394455 394580 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 394455 394580 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 394680 394784 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 394680 394784 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 394867 395000 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 394867 395000 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 395105 395288 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 395105 395288 . + 2 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 395385 395516 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 395385 395516 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 395611 395723 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 395611 395723 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 395758 395762 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 395758 395762 . + 2 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 395789 395790 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 395789 395790 . + 1 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 395847 395930 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 395847 395930 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 396010 398007 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered CDS 396010 397917 . + 0 ID=CDS:470142;Parent=Transcript:470142;Name=fgenesh2_kg.1__96__AT1G01320.1 +scaffold_1 JGI_Filtered exon 398112 398395 . + . ID=exon:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered three_prime_UTR 397918 398007 . + . ID=three_prime_UTR:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered three_prime_UTR 398112 398395 . + . ID=three_prime_UTR:470142;Parent=Transcript:470142 +scaffold_1 JGI_Filtered gene 398516 399359 . - . ID=fgenesh2_kg.1__97__AT1G01310.1;Name=fgenesh2_kg.1__97__AT1G01310.1 +scaffold_1 JGI_Filtered mRNA 398516 399359 . - . ID=Transcript:470143;Name=Transcript:470143;Parent=fgenesh2_kg.1__97__AT1G01310.1 +scaffold_1 JGI_Filtered three_prime_UTR 398516 398569 . - . ID=three_prime_UTR:470143;Parent=Transcript:470143 +scaffold_1 JGI_Filtered exon 398516 399359 . - . ID=exon:470143;Parent=Transcript:470143 +scaffold_1 JGI_Filtered CDS 398570 399295 . - 0 ID=CDS:470143;Parent=Transcript:470143;Name=fgenesh2_kg.1__97__AT1G01310.1 +scaffold_1 JGI_Filtered five_prime_UTR 399296 399359 . - . ID=five_prime_UTR:470143;Parent=Transcript:470143 +scaffold_1 JGI_Filtered gene 399645 400107 . - . ID=fgenesh2_kg.1__98__AT1G01305.1;Name=fgenesh2_kg.1__98__AT1G01305.1 +scaffold_1 JGI_Filtered mRNA 399645 400107 . - . ID=Transcript:470144;Name=Transcript:470144;Parent=fgenesh2_kg.1__98__AT1G01305.1 +scaffold_1 JGI_Filtered three_prime_UTR 399645 399650 . - . ID=three_prime_UTR:470144;Parent=Transcript:470144 +scaffold_1 JGI_Filtered exon 399645 400107 . - . ID=exon:470144;Parent=Transcript:470144 +scaffold_1 JGI_Filtered CDS 399651 400076 . - 0 ID=CDS:470144;Parent=Transcript:470144;Name=fgenesh2_kg.1__98__AT1G01305.1 +scaffold_1 JGI_Filtered five_prime_UTR 400077 400107 . - . ID=five_prime_UTR:470144;Parent=Transcript:470144 +scaffold_1 JGI_Filtered gene 400727 402402 . - . ID=fgenesh2_kg.1__99__AT1G01300.1;Name=fgenesh2_kg.1__99__AT1G01300.1 +scaffold_1 JGI_Filtered mRNA 400727 402402 . - . ID=Transcript:470145;Name=Transcript:470145;Parent=fgenesh2_kg.1__99__AT1G01300.1 +scaffold_1 JGI_Filtered three_prime_UTR 400727 400853 . - . ID=three_prime_UTR:470145;Parent=Transcript:470145 +scaffold_1 JGI_Filtered three_prime_UTR 400879 400937 . - . ID=three_prime_UTR:470145;Parent=Transcript:470145 +scaffold_1 JGI_Filtered exon 400727 400853 . - . ID=exon:470145;Parent=Transcript:470145 +scaffold_1 JGI_Filtered exon 400879 402402 . - . ID=exon:470145;Parent=Transcript:470145 +scaffold_1 JGI_Filtered CDS 400938 402395 . - 0 ID=CDS:470145;Parent=Transcript:470145;Name=fgenesh2_kg.1__99__AT1G01300.1 +scaffold_1 JGI_Filtered five_prime_UTR 402396 402402 . - . ID=five_prime_UTR:470145;Parent=Transcript:470145 +scaffold_1 JGI_Filtered gene 404199 405288 . - . ID=fgenesh1_pm.C_scaffold_1000085;Name=fgenesh1_pm.C_scaffold_1000085 +scaffold_1 JGI_Filtered mRNA 404199 405288 . - . ID=Transcript:311305;Name=Transcript:311305;Parent=fgenesh1_pm.C_scaffold_1000085 +scaffold_1 JGI_Filtered exon 404199 404894 . - . ID=exon:311305;Parent=Transcript:311305 +scaffold_1 JGI_Filtered CDS 404199 404894 . - 0 ID=CDS:311305;Parent=Transcript:311305;Name=fgenesh1_pm.C_scaffold_1000085 +scaffold_1 JGI_Filtered exon 405154 405288 . - . ID=exon:311305;Parent=Transcript:311305 +scaffold_1 JGI_Filtered CDS 405154 405288 . - 0 ID=CDS:311305;Parent=Transcript:311305;Name=fgenesh1_pm.C_scaffold_1000085 +scaffold_1 JGI_Filtered gene 405437 407120 . - . ID=fgenesh2_kg.1__100__AT1G01280.1;Name=fgenesh2_kg.1__100__AT1G01280.1 +scaffold_1 JGI_Filtered mRNA 405437 407120 . - . ID=Transcript:470146;Name=Transcript:470146;Parent=fgenesh2_kg.1__100__AT1G01280.1 +scaffold_1 JGI_Filtered three_prime_UTR 405437 405457 . - . ID=three_prime_UTR:470146;Parent=Transcript:470146 +scaffold_1 JGI_Filtered exon 405437 405457 . - . ID=exon:470146;Parent=Transcript:470146 +scaffold_1 JGI_Filtered exon 405466 406107 . - . ID=exon:470146;Parent=Transcript:470146 +scaffold_1 JGI_Filtered CDS 405466 406107 . - 0 ID=CDS:470146;Parent=Transcript:470146;Name=fgenesh2_kg.1__100__AT1G01280.1 +scaffold_1 JGI_Filtered exon 406189 406574 . - . ID=exon:470146;Parent=Transcript:470146 +scaffold_1 JGI_Filtered CDS 406189 406574 . - 0 ID=CDS:470146;Parent=Transcript:470146;Name=fgenesh2_kg.1__100__AT1G01280.1 +scaffold_1 JGI_Filtered exon 406637 407120 . - . ID=exon:470146;Parent=Transcript:470146 +scaffold_1 JGI_Filtered CDS 406637 407093 . - 2 ID=CDS:470146;Parent=Transcript:470146;Name=fgenesh2_kg.1__100__AT1G01280.1 +scaffold_1 JGI_Filtered five_prime_UTR 407094 407120 . - . ID=five_prime_UTR:470146;Parent=Transcript:470146 +scaffold_1 JGI_Filtered gene 412556 415094 . - . ID=fgenesh2_kg.1__101__AT1G01260.1;Name=fgenesh2_kg.1__101__AT1G01260.1 +scaffold_1 JGI_Filtered mRNA 412556 415094 . - . ID=Transcript:470147;Name=Transcript:470147;Parent=fgenesh2_kg.1__101__AT1G01260.1 +scaffold_1 JGI_Filtered three_prime_UTR 412556 412760 . - . ID=three_prime_UTR:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered exon 412556 414536 . - . ID=exon:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered CDS 412761 414536 . - 0 ID=CDS:470147;Parent=Transcript:470147;Name=fgenesh2_kg.1__101__AT1G01260.1 +scaffold_1 JGI_Filtered exon 414739 414755 . - . ID=exon:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered exon 414766 414843 . - . ID=exon:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered exon 414860 414942 . - . ID=exon:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered exon 414965 415094 . - . ID=exon:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered five_prime_UTR 414739 414755 . - . ID=five_prime_UTR:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered five_prime_UTR 414766 414843 . - . ID=five_prime_UTR:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered five_prime_UTR 414860 414942 . - . ID=five_prime_UTR:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered five_prime_UTR 414965 415094 . - . ID=five_prime_UTR:470147;Parent=Transcript:470147 +scaffold_1 JGI_Filtered gene 419014 419827 . + . ID=fgenesh2_kg.1__103__AT1G01250.1;Name=fgenesh2_kg.1__103__AT1G01250.1 +scaffold_1 JGI_Filtered mRNA 419014 419827 . + . ID=Transcript:470149;Name=Transcript:470149;Parent=fgenesh2_kg.1__103__AT1G01250.1 +scaffold_1 JGI_Filtered five_prime_UTR 419014 419024 . + . ID=five_prime_UTR:470149;Parent=Transcript:470149 +scaffold_1 JGI_Filtered exon 419014 419827 . + . ID=exon:470149;Parent=Transcript:470149 +scaffold_1 JGI_Filtered CDS 419025 419585 . + 0 ID=CDS:470149;Parent=Transcript:470149;Name=fgenesh2_kg.1__103__AT1G01250.1 +scaffold_1 JGI_Filtered three_prime_UTR 419586 419827 . + . ID=three_prime_UTR:470149;Parent=Transcript:470149 +scaffold_1 JGI_Filtered gene 422231 424117 . - . ID=fgenesh2_kg.1__106__AT1G01240.3;Name=fgenesh2_kg.1__106__AT1G01240.3 +scaffold_1 JGI_Filtered mRNA 422231 424117 . - . ID=Transcript:470152;Name=Transcript:470152;Parent=fgenesh2_kg.1__106__AT1G01240.3 +scaffold_1 JGI_Filtered three_prime_UTR 422231 422384 . - . ID=three_prime_UTR:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered exon 422231 423456 . - . ID=exon:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered CDS 422385 423389 . - 0 ID=CDS:470152;Parent=Transcript:470152;Name=fgenesh2_kg.1__106__AT1G01240.3 +scaffold_1 JGI_Filtered exon 423490 423639 . - . ID=exon:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered exon 423651 423680 . - . ID=exon:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered exon 423700 424075 . - . ID=exon:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered exon 424094 424117 . - . ID=exon:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered five_prime_UTR 423390 423456 . - . ID=five_prime_UTR:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered five_prime_UTR 423490 423639 . - . ID=five_prime_UTR:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered five_prime_UTR 423651 423680 . - . ID=five_prime_UTR:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered five_prime_UTR 423700 424075 . - . ID=five_prime_UTR:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered five_prime_UTR 424094 424117 . - . ID=five_prime_UTR:470152;Parent=Transcript:470152 +scaffold_1 JGI_Filtered gene 425719 427483 . - . ID=fgenesh2_kg.1__107__AT1G01230.1;Name=fgenesh2_kg.1__107__AT1G01230.1 +scaffold_1 JGI_Filtered mRNA 425719 427483 . - . ID=Transcript:470153;Name=Transcript:470153;Parent=fgenesh2_kg.1__107__AT1G01230.1 +scaffold_1 JGI_Filtered three_prime_UTR 425719 425865 . - . ID=three_prime_UTR:470153;Parent=Transcript:470153 +scaffold_1 JGI_Filtered exon 425719 426004 . - . ID=exon:470153;Parent=Transcript:470153 +scaffold_1 JGI_Filtered CDS 425866 426004 . - 0 ID=CDS:470153;Parent=Transcript:470153;Name=fgenesh2_kg.1__107__AT1G01230.1 +scaffold_1 JGI_Filtered exon 426310 426458 . - . ID=exon:470153;Parent=Transcript:470153 +scaffold_1 JGI_Filtered CDS 426310 426458 . - 1 ID=CDS:470153;Parent=Transcript:470153;Name=fgenesh2_kg.1__107__AT1G01230.1 +scaffold_1 JGI_Filtered exon 427118 427349 . - . ID=exon:470153;Parent=Transcript:470153 +scaffold_1 JGI_Filtered CDS 427118 427303 . - 0 ID=CDS:470153;Parent=Transcript:470153;Name=fgenesh2_kg.1__107__AT1G01230.1 +scaffold_1 JGI_Filtered exon 427362 427483 . - . ID=exon:470153;Parent=Transcript:470153 +scaffold_1 JGI_Filtered five_prime_UTR 427304 427349 . - . ID=five_prime_UTR:470153;Parent=Transcript:470153 +scaffold_1 JGI_Filtered five_prime_UTR 427362 427483 . - . ID=five_prime_UTR:470153;Parent=Transcript:470153 +scaffold_1 JGI_Filtered gene 428322 429820 . - . ID=fgenesh1_pm.C_scaffold_1000090;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered mRNA 428322 429820 . - . ID=Transcript:311310;Name=Transcript:311310;Parent=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered exon 428322 428585 . - . ID=exon:311310;Parent=Transcript:311310 +scaffold_1 JGI_Filtered CDS 428322 428585 . - 0 ID=CDS:311310;Parent=Transcript:311310;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered exon 428626 428658 . - . ID=exon:311310;Parent=Transcript:311310 +scaffold_1 JGI_Filtered CDS 428626 428658 . - 0 ID=CDS:311310;Parent=Transcript:311310;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered exon 428756 428845 . - . ID=exon:311310;Parent=Transcript:311310 +scaffold_1 JGI_Filtered CDS 428756 428845 . - 0 ID=CDS:311310;Parent=Transcript:311310;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered exon 429004 429047 . - . ID=exon:311310;Parent=Transcript:311310 +scaffold_1 JGI_Filtered CDS 429004 429047 . - 0 ID=CDS:311310;Parent=Transcript:311310;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered exon 429122 429185 . - . ID=exon:311310;Parent=Transcript:311310 +scaffold_1 JGI_Filtered CDS 429122 429185 . - 2 ID=CDS:311310;Parent=Transcript:311310;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered exon 429406 429557 . - . ID=exon:311310;Parent=Transcript:311310 +scaffold_1 JGI_Filtered CDS 429406 429557 . - 0 ID=CDS:311310;Parent=Transcript:311310;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered exon 429721 429820 . - . ID=exon:311310;Parent=Transcript:311310 +scaffold_1 JGI_Filtered CDS 429721 429820 . - 2 ID=CDS:311310;Parent=Transcript:311310;Name=fgenesh1_pm.C_scaffold_1000090 +scaffold_1 JGI_Filtered gene 430280 431563 . - . ID=fgenesh2_kg.1__108__AT1G01225.1;Name=fgenesh2_kg.1__108__AT1G01225.1 +scaffold_1 JGI_Filtered mRNA 430280 431563 . - . ID=Transcript:470154;Name=Transcript:470154;Parent=fgenesh2_kg.1__108__AT1G01225.1 +scaffold_1 JGI_Filtered exon 430280 430953 . - . ID=exon:470154;Parent=Transcript:470154 +scaffold_1 JGI_Filtered CDS 430280 430953 . - 0 ID=CDS:470154;Parent=Transcript:470154;Name=fgenesh2_kg.1__108__AT1G01225.1 +scaffold_1 JGI_Filtered exon 431385 431563 . - . ID=exon:470154;Parent=Transcript:470154 +scaffold_1 JGI_Filtered CDS 431385 431478 . - 2 ID=CDS:470154;Parent=Transcript:470154;Name=fgenesh2_kg.1__108__AT1G01225.1 +scaffold_1 JGI_Filtered five_prime_UTR 431479 431563 . - . ID=five_prime_UTR:470154;Parent=Transcript:470154 +scaffold_1 JGI_Filtered gene 431965 435824 . - . ID=fgenesh2_kg.1__109__AT1G01220.1;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered mRNA 431965 435824 . - . ID=Transcript:470155;Name=Transcript:470155;Parent=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered three_prime_UTR 431965 432008 . - . ID=three_prime_UTR:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered exon 431965 432008 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered exon 432064 432456 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered CDS 432064 432456 . - 0 ID=CDS:470155;Parent=Transcript:470155;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered exon 432543 433261 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered CDS 432543 433261 . - 0 ID=CDS:470155;Parent=Transcript:470155;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered exon 433345 434355 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered CDS 433345 434355 . - 2 ID=CDS:470155;Parent=Transcript:470155;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered exon 434452 434578 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered CDS 434452 434578 . - 2 ID=CDS:470155;Parent=Transcript:470155;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered exon 434691 435058 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered CDS 434691 435058 . - 0 ID=CDS:470155;Parent=Transcript:470155;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered exon 435142 435370 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered CDS 435142 435370 . - 2 ID=CDS:470155;Parent=Transcript:470155;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered exon 435504 435824 . - . ID=exon:470155;Parent=Transcript:470155 +scaffold_1 JGI_Filtered CDS 435504 435824 . - 0 ID=CDS:470155;Parent=Transcript:470155;Name=fgenesh2_kg.1__109__AT1G01220.1 +scaffold_1 JGI_Filtered gene 436171 436800 . - . ID=fgenesh1_pm.C_scaffold_1000093;Name=fgenesh1_pm.C_scaffold_1000093 +scaffold_1 JGI_Filtered mRNA 436171 436800 . - . ID=Transcript:311313;Name=Transcript:311313;Parent=fgenesh1_pm.C_scaffold_1000093 +scaffold_1 JGI_Filtered exon 436171 436295 . - . ID=exon:311313;Parent=Transcript:311313 +scaffold_1 JGI_Filtered CDS 436171 436295 . - 0 ID=CDS:311313;Parent=Transcript:311313;Name=fgenesh1_pm.C_scaffold_1000093 +scaffold_1 JGI_Filtered exon 436491 436581 . - . ID=exon:311313;Parent=Transcript:311313 +scaffold_1 JGI_Filtered CDS 436491 436581 . - 2 ID=CDS:311313;Parent=Transcript:311313;Name=fgenesh1_pm.C_scaffold_1000093 +scaffold_1 JGI_Filtered exon 436696 436800 . - . ID=exon:311313;Parent=Transcript:311313 +scaffold_1 JGI_Filtered CDS 436696 436800 . - 0 ID=CDS:311313;Parent=Transcript:311313;Name=fgenesh1_pm.C_scaffold_1000093 +scaffold_1 JGI_Filtered gene 438129 439861 . + . ID=fgenesh2_kg.1__110__AT1G01200.1;Name=fgenesh2_kg.1__110__AT1G01200.1 +scaffold_1 JGI_Filtered mRNA 438129 439861 . + . ID=Transcript:470156;Name=Transcript:470156;Parent=fgenesh2_kg.1__110__AT1G01200.1 +scaffold_1 JGI_Filtered five_prime_UTR 438129 438203 . + . ID=five_prime_UTR:470156;Parent=Transcript:470156 +scaffold_1 JGI_Filtered exon 438129 438469 . + . ID=exon:470156;Parent=Transcript:470156 +scaffold_1 JGI_Filtered CDS 438204 438469 . + 0 ID=CDS:470156;Parent=Transcript:470156;Name=fgenesh2_kg.1__110__AT1G01200.1 +scaffold_1 JGI_Filtered exon 439221 439669 . + . ID=exon:470156;Parent=Transcript:470156 +scaffold_1 JGI_Filtered CDS 439221 439668 . + 2 ID=CDS:470156;Parent=Transcript:470156;Name=fgenesh2_kg.1__110__AT1G01200.1 +scaffold_1 JGI_Filtered exon 439703 439861 . + . ID=exon:470156;Parent=Transcript:470156 +scaffold_1 JGI_Filtered three_prime_UTR 439669 439669 . + . ID=three_prime_UTR:470156;Parent=Transcript:470156 +scaffold_1 JGI_Filtered three_prime_UTR 439703 439861 . + . ID=three_prime_UTR:470156;Parent=Transcript:470156 +scaffold_1 JGI_Filtered gene 441904 443720 . + . ID=fgenesh1_pm.C_scaffold_1000095;Name=fgenesh1_pm.C_scaffold_1000095 +scaffold_1 JGI_Filtered mRNA 441904 443720 . + . ID=Transcript:311315;Name=Transcript:311315;Parent=fgenesh1_pm.C_scaffold_1000095 +scaffold_1 JGI_Filtered exon 441904 442896 . + . ID=exon:311315;Parent=Transcript:311315 +scaffold_1 JGI_Filtered CDS 441904 442896 . + 0 ID=CDS:311315;Parent=Transcript:311315;Name=fgenesh1_pm.C_scaffold_1000095 +scaffold_1 JGI_Filtered exon 443094 443720 . + . ID=exon:311315;Parent=Transcript:311315 +scaffold_1 JGI_Filtered CDS 443094 443720 . + 0 ID=CDS:311315;Parent=Transcript:311315;Name=fgenesh1_pm.C_scaffold_1000095 +scaffold_1 JGI_Filtered gene 452377 453314 . + . ID=Al_scaffold_0001_113;Name=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered mRNA 452377 453314 . + . ID=Transcript:909859;Name=Transcript:909859;Parent=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered exon 452377 452416 . + . ID=exon:909859;Parent=Transcript:909859 +scaffold_1 JGI_Filtered CDS 452377 452416 . + 0 ID=CDS:909859;Parent=Transcript:909859;Name=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered exon 452531 452573 . + . ID=exon:909859;Parent=Transcript:909859 +scaffold_1 JGI_Filtered CDS 452531 452573 . + 1 ID=CDS:909859;Parent=Transcript:909859;Name=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered exon 452684 452726 . + . ID=exon:909859;Parent=Transcript:909859 +scaffold_1 JGI_Filtered CDS 452684 452726 . + 2 ID=CDS:909859;Parent=Transcript:909859;Name=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered exon 452990 453034 . + . ID=exon:909859;Parent=Transcript:909859 +scaffold_1 JGI_Filtered CDS 452990 453034 . + 0 ID=CDS:909859;Parent=Transcript:909859;Name=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered exon 453144 453187 . + . ID=exon:909859;Parent=Transcript:909859 +scaffold_1 JGI_Filtered CDS 453144 453187 . + 0 ID=CDS:909859;Parent=Transcript:909859;Name=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered exon 453296 453314 . + . ID=exon:909859;Parent=Transcript:909859 +scaffold_1 JGI_Filtered CDS 453296 453314 . + 2 ID=CDS:909859;Parent=Transcript:909859;Name=Al_scaffold_0001_113 +scaffold_1 JGI_Filtered gene 454219 455331 . - . ID=Al_scaffold_0001_114;Name=Al_scaffold_0001_114 +scaffold_1 JGI_Filtered mRNA 454219 455331 . - . ID=Transcript:909860;Name=Transcript:909860;Parent=Al_scaffold_0001_114 +scaffold_1 JGI_Filtered exon 454219 454242 . - . ID=exon:909860;Parent=Transcript:909860 +scaffold_1 JGI_Filtered CDS 454219 454242 . - 0 ID=CDS:909860;Parent=Transcript:909860;Name=Al_scaffold_0001_114 +scaffold_1 JGI_Filtered exon 454408 455331 . - . ID=exon:909860;Parent=Transcript:909860 +scaffold_1 JGI_Filtered CDS 454408 455331 . - 0 ID=CDS:909860;Parent=Transcript:909860;Name=Al_scaffold_0001_114 +scaffold_1 JGI_Filtered gene 457115 457459 . + . ID=fgenesh1_pm.C_scaffold_1000097;Name=fgenesh1_pm.C_scaffold_1000097 +scaffold_1 JGI_Filtered mRNA 457115 457459 . + . ID=Transcript:311317;Name=Transcript:311317;Parent=fgenesh1_pm.C_scaffold_1000097 +scaffold_1 JGI_Filtered exon 457115 457230 . + . ID=exon:311317;Parent=Transcript:311317 +scaffold_1 JGI_Filtered CDS 457115 457230 . + 0 ID=CDS:311317;Parent=Transcript:311317;Name=fgenesh1_pm.C_scaffold_1000097 +scaffold_1 JGI_Filtered exon 457276 457459 . + . ID=exon:311317;Parent=Transcript:311317 +scaffold_1 JGI_Filtered CDS 457276 457459 . + 2 ID=CDS:311317;Parent=Transcript:311317;Name=fgenesh1_pm.C_scaffold_1000097 +scaffold_1 JGI_Filtered gene 457529 459100 . - . ID=scaffold_100135.1;Name=scaffold_100135.1 +scaffold_1 JGI_Filtered mRNA 457529 459100 . - . ID=Transcript:918854;Name=Transcript:918854;Parent=scaffold_100135.1 +scaffold_1 JGI_Filtered three_prime_UTR 457529 457585 . - . ID=three_prime_UTR:918854;Parent=Transcript:918854 +scaffold_1 JGI_Filtered exon 457529 457722 . - . ID=exon:918854;Parent=Transcript:918854 +scaffold_1 JGI_Filtered CDS 457586 457722 . - 0 ID=CDS:918854;Parent=Transcript:918854;Name=scaffold_100135.1 +scaffold_1 JGI_Filtered exon 457828 458098 . - . ID=exon:918854;Parent=Transcript:918854 +scaffold_1 JGI_Filtered CDS 457828 458098 . - 2 ID=CDS:918854;Parent=Transcript:918854;Name=scaffold_100135.1 +scaffold_1 JGI_Filtered exon 458213 458321 . - . ID=exon:918854;Parent=Transcript:918854 +scaffold_1 JGI_Filtered CDS 458213 458321 . - 0 ID=CDS:918854;Parent=Transcript:918854;Name=scaffold_100135.1 +scaffold_1 JGI_Filtered exon 458456 458532 . - . ID=exon:918854;Parent=Transcript:918854 +scaffold_1 JGI_Filtered CDS 458456 458532 . - 1 ID=CDS:918854;Parent=Transcript:918854;Name=scaffold_100135.1 +scaffold_1 JGI_Filtered exon 458998 459100 . - . ID=exon:918854;Parent=Transcript:918854 +scaffold_1 JGI_Filtered CDS 458998 459078 . - 0 ID=CDS:918854;Parent=Transcript:918854;Name=scaffold_100135.1 +scaffold_1 JGI_Filtered five_prime_UTR 459079 459100 . - . ID=five_prime_UTR:918854;Parent=Transcript:918854 +scaffold_1 JGI_Filtered gene 459556 460824 . + . ID=scaffold_100136.1;Name=scaffold_100136.1 +scaffold_1 JGI_Filtered mRNA 459556 460824 . + . ID=Transcript:918855;Name=Transcript:918855;Parent=scaffold_100136.1 +scaffold_1 JGI_Filtered five_prime_UTR 459556 459577 . + . ID=five_prime_UTR:918855;Parent=Transcript:918855 +scaffold_1 JGI_Filtered exon 459556 459667 . + . ID=exon:918855;Parent=Transcript:918855 +scaffold_1 JGI_Filtered CDS 459578 459667 . + 0 ID=CDS:918855;Parent=Transcript:918855;Name=scaffold_100136.1 +scaffold_1 JGI_Filtered exon 459934 460584 . + . ID=exon:918855;Parent=Transcript:918855 +scaffold_1 JGI_Filtered CDS 459934 460584 . + 0 ID=CDS:918855;Parent=Transcript:918855;Name=scaffold_100136.1 +scaffold_1 JGI_Filtered exon 460664 460824 . + . ID=exon:918855;Parent=Transcript:918855 +scaffold_1 JGI_Filtered CDS 460664 460804 . + 0 ID=CDS:918855;Parent=Transcript:918855;Name=scaffold_100136.1 +scaffold_1 JGI_Filtered three_prime_UTR 460805 460824 . + . ID=three_prime_UTR:918855;Parent=Transcript:918855 +scaffold_1 JGI_Filtered gene 464358 467635 . + . ID=fgenesh2_kg.1__115__AT1G01140.3;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered mRNA 464358 467635 . + . ID=Transcript:470161;Name=Transcript:470161;Parent=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered five_prime_UTR 464358 464367 . + . ID=five_prime_UTR:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered exon 464358 464559 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 464368 464559 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 464957 465019 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 464957 465019 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 465102 465173 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 465102 465173 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 465287 465394 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 465287 465394 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 465488 465568 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 465488 465568 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 465687 465740 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 465687 465740 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 465964 466089 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 465964 466089 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 466185 466274 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 466185 466274 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 466395 466520 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 466395 466520 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 466611 466718 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 466611 466718 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 466811 466927 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 466811 466927 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 467007 467063 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 467007 467063 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 467155 467235 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 467155 467235 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 467273 467277 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 467273 467277 . + 0 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 467336 467509 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered CDS 467336 467414 . + 2 ID=CDS:470161;Parent=Transcript:470161;Name=fgenesh2_kg.1__115__AT1G01140.3 +scaffold_1 JGI_Filtered exon 467532 467541 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered exon 467567 467586 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered exon 467605 467635 . + . ID=exon:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered three_prime_UTR 467415 467509 . + . ID=three_prime_UTR:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered three_prime_UTR 467532 467541 . + . ID=three_prime_UTR:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered three_prime_UTR 467567 467586 . + . ID=three_prime_UTR:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered three_prime_UTR 467605 467635 . + . ID=three_prime_UTR:470161;Parent=Transcript:470161 +scaffold_1 JGI_Filtered gene 468909 469542 . - . ID=Al_scaffold_0001_119;Name=Al_scaffold_0001_119 +scaffold_1 JGI_Filtered mRNA 468909 469542 . - . ID=Transcript:909865;Name=Transcript:909865;Parent=Al_scaffold_0001_119 +scaffold_1 JGI_Filtered three_prime_UTR 468909 468953 . - . ID=three_prime_UTR:909865;Parent=Transcript:909865 +scaffold_1 JGI_Filtered three_prime_UTR 469304 469419 . - . ID=three_prime_UTR:909865;Parent=Transcript:909865 +scaffold_1 JGI_Filtered exon 468909 468953 . - . ID=exon:909865;Parent=Transcript:909865 +scaffold_1 JGI_Filtered exon 469304 469419 . - . ID=exon:909865;Parent=Transcript:909865 +scaffold_1 JGI_Filtered CDS 469304 469419 . - 0 ID=CDS:909865;Parent=Transcript:909865;Name=Al_scaffold_0001_119 +scaffold_1 JGI_Filtered exon 469506 469542 . - . ID=exon:909865;Parent=Transcript:909865 +scaffold_1 JGI_Filtered CDS 469506 469542 . - 2 ID=CDS:909865;Parent=Transcript:909865;Name=Al_scaffold_0001_119 +scaffold_1 JGI_Filtered CDS 469506 468953 . - 0 ID=CDS:909865;Parent=Transcript:909865;Name=Al_scaffold_0001_119 +scaffold_1 JGI_Filtered gene 470268 474739 . + . ID=fgenesh1_pm.C_scaffold_1000101;Name=fgenesh1_pm.C_scaffold_1000101 +scaffold_1 JGI_Filtered mRNA 470268 474739 . + . ID=Transcript:311321;Name=Transcript:311321;Parent=fgenesh1_pm.C_scaffold_1000101 +scaffold_1 JGI_Filtered exon 470268 470657 . + . ID=exon:311321;Parent=Transcript:311321 +scaffold_1 JGI_Filtered CDS 470268 470657 . + 0 ID=CDS:311321;Parent=Transcript:311321;Name=fgenesh1_pm.C_scaffold_1000101 +scaffold_1 JGI_Filtered exon 472524 472649 . + . ID=exon:311321;Parent=Transcript:311321 +scaffold_1 JGI_Filtered CDS 472524 472649 . + 0 ID=CDS:311321;Parent=Transcript:311321;Name=fgenesh1_pm.C_scaffold_1000101 +scaffold_1 JGI_Filtered exon 473438 473494 . + . ID=exon:311321;Parent=Transcript:311321 +scaffold_1 JGI_Filtered CDS 473438 473494 . + 0 ID=CDS:311321;Parent=Transcript:311321;Name=fgenesh1_pm.C_scaffold_1000101 +scaffold_1 JGI_Filtered exon 473856 473857 . + . ID=exon:311321;Parent=Transcript:311321 +scaffold_1 JGI_Filtered CDS 473856 473857 . + 0 ID=CDS:311321;Parent=Transcript:311321;Name=fgenesh1_pm.C_scaffold_1000101 +scaffold_1 JGI_Filtered exon 474652 474739 . + . ID=exon:311321;Parent=Transcript:311321 +scaffold_1 JGI_Filtered CDS 474652 474739 . + 2 ID=CDS:311321;Parent=Transcript:311321;Name=fgenesh1_pm.C_scaffold_1000101 +scaffold_1 JGI_Filtered gene 475576 477203 . + . ID=scaffold_100139.1;Name=scaffold_100139.1 +scaffold_1 JGI_Filtered mRNA 475576 477203 . + . ID=Transcript:918858;Name=Transcript:918858;Parent=scaffold_100139.1 +scaffold_1 JGI_Filtered five_prime_UTR 475576 475596 . + . ID=five_prime_UTR:918858;Parent=Transcript:918858 +scaffold_1 JGI_Filtered exon 475576 477203 . + . ID=exon:918858;Parent=Transcript:918858 +scaffold_1 JGI_Filtered CDS 475597 477183 . + 0 ID=CDS:918858;Parent=Transcript:918858;Name=scaffold_100139.1 +scaffold_1 JGI_Filtered three_prime_UTR 477184 477203 . + . ID=three_prime_UTR:918858;Parent=Transcript:918858 +scaffold_1 JGI_Filtered gene 479138 481385 . - . ID=fgenesh1_pg.C_scaffold_1000109;Name=fgenesh1_pg.C_scaffold_1000109 +scaffold_1 JGI_Filtered mRNA 479138 481385 . - . ID=Transcript:333544;Name=Transcript:333544;Parent=fgenesh1_pg.C_scaffold_1000109 +scaffold_1 JGI_Filtered exon 479138 479929 . - . ID=exon:333544;Parent=Transcript:333544 +scaffold_1 JGI_Filtered CDS 479138 479929 . - 0 ID=CDS:333544;Parent=Transcript:333544;Name=fgenesh1_pg.C_scaffold_1000109 +scaffold_1 JGI_Filtered exon 480012 480152 . - . ID=exon:333544;Parent=Transcript:333544 +scaffold_1 JGI_Filtered CDS 480012 480152 . - 0 ID=CDS:333544;Parent=Transcript:333544;Name=fgenesh1_pg.C_scaffold_1000109 +scaffold_1 JGI_Filtered exon 480456 480701 . - . ID=exon:333544;Parent=Transcript:333544 +scaffold_1 JGI_Filtered CDS 480456 480701 . - 0 ID=CDS:333544;Parent=Transcript:333544;Name=fgenesh1_pg.C_scaffold_1000109 +scaffold_1 JGI_Filtered exon 480886 481182 . - . ID=exon:333544;Parent=Transcript:333544 +scaffold_1 JGI_Filtered CDS 480886 481182 . - 0 ID=CDS:333544;Parent=Transcript:333544;Name=fgenesh1_pg.C_scaffold_1000109 +scaffold_1 JGI_Filtered exon 481278 481385 . - . ID=exon:333544;Parent=Transcript:333544 +scaffold_1 JGI_Filtered CDS 481278 481385 . - 0 ID=CDS:333544;Parent=Transcript:333544;Name=fgenesh1_pg.C_scaffold_1000109 +scaffold_1 JGI_Filtered gene 483425 484126 . + . ID=fgenesh1_pm.C_scaffold_1000104;Name=fgenesh1_pm.C_scaffold_1000104 +scaffold_1 JGI_Filtered mRNA 483425 484126 . + . ID=Transcript:311324;Name=Transcript:311324;Parent=fgenesh1_pm.C_scaffold_1000104 +scaffold_1 JGI_Filtered exon 483425 483496 . + . ID=exon:311324;Parent=Transcript:311324 +scaffold_1 JGI_Filtered CDS 483425 483496 . + 0 ID=CDS:311324;Parent=Transcript:311324;Name=fgenesh1_pm.C_scaffold_1000104 +scaffold_1 JGI_Filtered exon 483768 483983 . + . ID=exon:311324;Parent=Transcript:311324 +scaffold_1 JGI_Filtered CDS 483768 483983 . + 0 ID=CDS:311324;Parent=Transcript:311324;Name=fgenesh1_pm.C_scaffold_1000104 +scaffold_1 JGI_Filtered exon 484073 484126 . + . ID=exon:311324;Parent=Transcript:311324 +scaffold_1 JGI_Filtered CDS 484073 484126 . + 0 ID=CDS:311324;Parent=Transcript:311324;Name=fgenesh1_pm.C_scaffold_1000104 +scaffold_1 JGI_Filtered gene 485273 487146 . + . ID=fgenesh2_kg.1__125__AT1G01090.1;Name=fgenesh2_kg.1__125__AT1G01090.1 +scaffold_1 JGI_Filtered mRNA 485273 487146 . + . ID=Transcript:470171;Name=Transcript:470171;Parent=fgenesh2_kg.1__125__AT1G01090.1 +scaffold_1 JGI_Filtered five_prime_UTR 485273 485330 . + . ID=five_prime_UTR:470171;Parent=Transcript:470171 +scaffold_1 JGI_Filtered five_prime_UTR 485343 485360 . + . ID=five_prime_UTR:470171;Parent=Transcript:470171 +scaffold_1 JGI_Filtered exon 485273 485330 . + . ID=exon:470171;Parent=Transcript:470171 +scaffold_1 JGI_Filtered exon 485343 485603 . + . ID=exon:470171;Parent=Transcript:470171 +scaffold_1 JGI_Filtered CDS 485361 485603 . + 0 ID=CDS:470171;Parent=Transcript:470171;Name=fgenesh2_kg.1__125__AT1G01090.1 +scaffold_1 JGI_Filtered exon 485835 486612 . + . ID=exon:470171;Parent=Transcript:470171 +scaffold_1 JGI_Filtered CDS 485835 486612 . + 0 ID=CDS:470171;Parent=Transcript:470171;Name=fgenesh2_kg.1__125__AT1G01090.1 +scaffold_1 JGI_Filtered exon 486705 487146 . + . ID=exon:470171;Parent=Transcript:470171 +scaffold_1 JGI_Filtered CDS 486705 486982 . + 1 ID=CDS:470171;Parent=Transcript:470171;Name=fgenesh2_kg.1__125__AT1G01090.1 +scaffold_1 JGI_Filtered three_prime_UTR 486983 487146 . + . ID=three_prime_UTR:470171;Parent=Transcript:470171 +scaffold_1 JGI_Filtered gene 494740 496028 . + . ID=Al_scaffold_0001_125;Name=Al_scaffold_0001_125 +scaffold_1 JGI_Filtered mRNA 494740 496028 . + . ID=Transcript:909871;Name=Transcript:909871;Parent=Al_scaffold_0001_125 +scaffold_1 JGI_Filtered exon 494740 495168 . + . ID=exon:909871;Parent=Transcript:909871 +scaffold_1 JGI_Filtered CDS 494740 495168 . + 0 ID=CDS:909871;Parent=Transcript:909871;Name=Al_scaffold_0001_125 +scaffold_1 JGI_Filtered exon 495402 495503 . + . ID=exon:909871;Parent=Transcript:909871 +scaffold_1 JGI_Filtered CDS 495402 495503 . + 0 ID=CDS:909871;Parent=Transcript:909871;Name=Al_scaffold_0001_125 +scaffold_1 JGI_Filtered exon 495585 495893 . + . ID=exon:909871;Parent=Transcript:909871 +scaffold_1 JGI_Filtered CDS 495585 495893 . + 0 ID=CDS:909871;Parent=Transcript:909871;Name=Al_scaffold_0001_125 +scaffold_1 JGI_Filtered exon 495972 496028 . + . ID=exon:909871;Parent=Transcript:909871 +scaffold_1 JGI_Filtered CDS 495972 496028 . + 0 ID=CDS:909871;Parent=Transcript:909871;Name=Al_scaffold_0001_125 +scaffold_1 JGI_Filtered gene 501318 503489 . + . ID=scaffold_100145.1;Name=scaffold_100145.1 +scaffold_1 JGI_Filtered mRNA 501318 503489 . + . ID=Transcript:918864;Name=Transcript:918864;Parent=scaffold_100145.1 +scaffold_1 JGI_Filtered five_prime_UTR 501318 501338 . + . ID=five_prime_UTR:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered exon 501318 501541 . + . ID=exon:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered CDS 501339 501541 . + 0 ID=CDS:918864;Parent=Transcript:918864;Name=scaffold_100145.1 +scaffold_1 JGI_Filtered exon 501671 501733 . + . ID=exon:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered CDS 501671 501733 . + 2 ID=CDS:918864;Parent=Transcript:918864;Name=scaffold_100145.1 +scaffold_1 JGI_Filtered exon 501923 502039 . + . ID=exon:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered CDS 501923 502039 . + 2 ID=CDS:918864;Parent=Transcript:918864;Name=scaffold_100145.1 +scaffold_1 JGI_Filtered exon 502529 502928 . + . ID=exon:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered CDS 502529 502928 . + 2 ID=CDS:918864;Parent=Transcript:918864;Name=scaffold_100145.1 +scaffold_1 JGI_Filtered exon 503056 503207 . + . ID=exon:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered CDS 503056 503207 . + 0 ID=CDS:918864;Parent=Transcript:918864;Name=scaffold_100145.1 +scaffold_1 JGI_Filtered exon 503319 503489 . + . ID=exon:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered CDS 503319 503469 . + 2 ID=CDS:918864;Parent=Transcript:918864;Name=scaffold_100145.1 +scaffold_1 JGI_Filtered three_prime_UTR 503470 503489 . + . ID=three_prime_UTR:918864;Parent=Transcript:918864 +scaffold_1 JGI_Filtered gene 504510 508725 . + . ID=fgenesh2_kg.1__131__AT1G01060.3;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered mRNA 504510 508725 . + . ID=Transcript:470177;Name=Transcript:470177;Parent=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered five_prime_UTR 504510 504622 . + . ID=five_prime_UTR:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered five_prime_UTR 504765 504790 . + . ID=five_prime_UTR:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered five_prime_UTR 504961 505102 . + . ID=five_prime_UTR:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered exon 504510 504622 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered exon 504765 504790 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered exon 504961 505141 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 505103 505141 . + 0 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 505225 505336 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 505225 505336 . + 0 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 505458 505519 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 505458 505519 . + 1 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 506154 506387 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 506154 506387 . + 0 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 506469 506549 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 506469 506549 . + 0 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 506562 506566 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 506562 506566 . + 0 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 506608 506613 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 506608 506613 . + 2 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 506651 507695 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 506651 507695 . + 2 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 507773 508118 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered CDS 507773 508108 . + 0 ID=CDS:470177;Parent=Transcript:470177;Name=fgenesh2_kg.1__131__AT1G01060.3 +scaffold_1 JGI_Filtered exon 508531 508654 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered exon 508695 508725 . + . ID=exon:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered three_prime_UTR 508109 508118 . + . ID=three_prime_UTR:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered three_prime_UTR 508531 508654 . + . ID=three_prime_UTR:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered three_prime_UTR 508695 508725 . + . ID=three_prime_UTR:470177;Parent=Transcript:470177 +scaffold_1 JGI_Filtered gene 509479 510755 . + . ID=Al_scaffold_0001_128;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered mRNA 509479 510755 . + . ID=Transcript:909874;Name=Transcript:909874;Parent=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 509479 509602 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 509479 509602 . + 0 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 509678 509706 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 509678 509706 . + 1 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 509828 509893 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 509828 509893 . + 0 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 509970 510077 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 509970 510077 . + 0 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 510157 510222 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 510157 510222 . + 0 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 510331 510451 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 510331 510451 . + 0 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 510544 510625 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 510544 510625 . + 1 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered exon 510713 510755 . + . ID=exon:909874;Parent=Transcript:909874 +scaffold_1 JGI_Filtered CDS 510713 510755 . + 2 ID=CDS:909874;Parent=Transcript:909874;Name=Al_scaffold_0001_128 +scaffold_1 JGI_Filtered gene 511272 518844 . - . ID=fgenesh1_pg.C_scaffold_1000116;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered mRNA 511272 518844 . - . ID=Transcript:333551;Name=Transcript:333551;Parent=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 511272 511449 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 511272 511449 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 511549 511955 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 511549 511955 . - 1 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 512053 512217 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 512053 512217 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 512299 513204 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 512299 513204 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 513289 513479 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 513289 513479 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 513562 513659 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 513562 513659 . - 2 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 513705 513884 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 513705 513884 . - 1 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 513933 514561 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 513933 514561 . - 1 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 514655 514750 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 514655 514750 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 514836 514997 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 514836 514997 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 515084 515266 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 515084 515266 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 515355 515505 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 515355 515505 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 515591 515824 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 515591 515824 . - 1 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 515916 516076 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 515916 516076 . - 1 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 516159 516281 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 516159 516281 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 516369 516541 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 516369 516541 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 516631 516850 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 516631 516850 . - 2 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 516939 517333 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 516939 517333 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 517420 517630 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 517420 517630 . - 2 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 517729 517842 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 517729 517842 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered exon 517933 518844 . - . ID=exon:333551;Parent=Transcript:333551 +scaffold_1 JGI_Filtered CDS 517933 518844 . - 0 ID=CDS:333551;Parent=Transcript:333551;Name=fgenesh1_pg.C_scaffold_1000116 +scaffold_1 JGI_Filtered gene 527878 530499 . + . ID=fgenesh2_kg.1__134__AT1G01030.1;Name=fgenesh2_kg.1__134__AT1G01030.1 +scaffold_1 JGI_Filtered mRNA 527878 530499 . + . ID=Transcript:470180;Name=Transcript:470180;Parent=fgenesh2_kg.1__134__AT1G01030.1 +scaffold_1 JGI_Filtered five_prime_UTR 527878 527920 . + . ID=five_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered five_prime_UTR 527931 528123 . + . ID=five_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered five_prime_UTR 528138 528276 . + . ID=five_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered five_prime_UTR 528435 528567 . + . ID=five_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered five_prime_UTR 528642 528687 . + . ID=five_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered five_prime_UTR 528701 528757 . + . ID=five_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered exon 527878 527920 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered exon 527931 528123 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered exon 528138 528276 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered exon 528435 528567 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered exon 528642 528687 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered exon 528701 529642 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered CDS 528758 529642 . + 0 ID=CDS:470180;Parent=Transcript:470180;Name=fgenesh2_kg.1__134__AT1G01030.1 +scaffold_1 JGI_Filtered exon 530097 530295 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered CDS 530097 530276 . + 0 ID=CDS:470180;Parent=Transcript:470180;Name=fgenesh2_kg.1__134__AT1G01030.1 +scaffold_1 JGI_Filtered exon 530326 530499 . + . ID=exon:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered three_prime_UTR 530277 530295 . + . ID=three_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered three_prime_UTR 530326 530499 . + . ID=three_prime_UTR:470180;Parent=Transcript:470180 +scaffold_1 JGI_Filtered gene 533525 535284 . + . ID=fgenesh2_kg.1__135__AT1G01020.1;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered mRNA 533525 535284 . + . ID=Transcript:470181;Name=Transcript:470181;Parent=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered five_prime_UTR 533525 533539 . + . ID=five_prime_UTR:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered exon 533525 533635 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 533540 533635 . + 0 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 533760 533807 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 533760 533807 . + 0 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 533899 533988 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 533899 533988 . + 0 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 534213 534258 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 534213 534258 . + 0 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 534347 534420 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 534347 534420 . + 1 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 534547 534632 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 534547 534632 . + 0 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 534745 534811 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 534745 534811 . + 2 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 534959 535034 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 534959 535034 . + 0 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered exon 535116 535284 . + . ID=exon:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered CDS 535116 535270 . + 1 ID=CDS:470181;Parent=Transcript:470181;Name=fgenesh2_kg.1__135__AT1G01020.1 +scaffold_1 JGI_Filtered three_prime_UTR 535271 535284 . + . ID=three_prime_UTR:470181;Parent=Transcript:470181 +scaffold_1 JGI_Filtered gene 535629 535835 . + . ID=Al_scaffold_0001_132;Name=Al_scaffold_0001_132 +scaffold_1 JGI_Filtered mRNA 535629 535835 . + . ID=Transcript:909878;Name=Transcript:909878;Parent=Al_scaffold_0001_132 +scaffold_1 JGI_Filtered exon 535629 535835 . + . ID=exon:909878;Parent=Transcript:909878 +scaffold_1 JGI_Filtered CDS 535629 535835 . + 0 ID=CDS:909878;Parent=Transcript:909878;Name=Al_scaffold_0001_132 +scaffold_1 JGI_Filtered gene 536480 538514 . - . ID=fgenesh1_pg.C_scaffold_1000119;Name=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered mRNA 536480 538514 . - . ID=Transcript:333554;Name=Transcript:333554;Parent=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered exon 536480 536686 . - . ID=exon:333554;Parent=Transcript:333554 +scaffold_1 JGI_Filtered CDS 536480 536686 . - 0 ID=CDS:333554;Parent=Transcript:333554;Name=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered exon 536801 536968 . - . ID=exon:333554;Parent=Transcript:333554 +scaffold_1 JGI_Filtered CDS 536801 536968 . - 0 ID=CDS:333554;Parent=Transcript:333554;Name=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered exon 537047 537514 . - . ID=exon:333554;Parent=Transcript:333554 +scaffold_1 JGI_Filtered CDS 537047 537514 . - 0 ID=CDS:333554;Parent=Transcript:333554;Name=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered exon 537605 537724 . - . ID=exon:333554;Parent=Transcript:333554 +scaffold_1 JGI_Filtered CDS 537605 537724 . - 0 ID=CDS:333554;Parent=Transcript:333554;Name=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered exon 537996 538279 . - . ID=exon:333554;Parent=Transcript:333554 +scaffold_1 JGI_Filtered CDS 537996 538279 . - 0 ID=CDS:333554;Parent=Transcript:333554;Name=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered exon 538364 538514 . - . ID=exon:333554;Parent=Transcript:333554 +scaffold_1 JGI_Filtered CDS 538364 538514 . - 2 ID=CDS:333554;Parent=Transcript:333554;Name=fgenesh1_pg.C_scaffold_1000119 +scaffold_1 JGI_Filtered gene 541678 542518 . - . ID=Al_scaffold_0001_134;Name=Al_scaffold_0001_134 +scaffold_1 JGI_Filtered mRNA 541678 542518 . - . ID=Transcript:909880;Name=Transcript:909880;Parent=Al_scaffold_0001_134 +scaffold_1 JGI_Filtered exon 541678 541747 . - . ID=exon:909880;Parent=Transcript:909880 +scaffold_1 JGI_Filtered CDS 541678 541747 . - 0 ID=CDS:909880;Parent=Transcript:909880;Name=Al_scaffold_0001_134 +scaffold_1 JGI_Filtered exon 541857 541892 . - . ID=exon:909880;Parent=Transcript:909880 +scaffold_1 JGI_Filtered CDS 541857 541892 . - 1 ID=CDS:909880;Parent=Transcript:909880;Name=Al_scaffold_0001_134 +scaffold_1 JGI_Filtered exon 542020 542053 . - . ID=exon:909880;Parent=Transcript:909880 +scaffold_1 JGI_Filtered CDS 542020 542053 . - 1 ID=CDS:909880;Parent=Transcript:909880;Name=Al_scaffold_0001_134 +scaffold_1 JGI_Filtered exon 542331 542364 . - . ID=exon:909880;Parent=Transcript:909880 +scaffold_1 JGI_Filtered CDS 542331 542364 . - 2 ID=CDS:909880;Parent=Transcript:909880;Name=Al_scaffold_0001_134 +scaffold_1 JGI_Filtered exon 542492 542518 . - . ID=exon:909880;Parent=Transcript:909880 +scaffold_1 JGI_Filtered CDS 542492 542518 . - 0 ID=CDS:909880;Parent=Transcript:909880;Name=Al_scaffold_0001_134 +scaffold_1 JGI_Filtered gene 546617 548110 . + . ID=Al_scaffold_0001_135;Name=Al_scaffold_0001_135 +scaffold_1 JGI_Filtered mRNA 546617 548110 . + . ID=Transcript:909881;Name=Transcript:909881;Parent=Al_scaffold_0001_135 +scaffold_1 JGI_Filtered exon 546617 546758 . + . ID=exon:909881;Parent=Transcript:909881 +scaffold_1 JGI_Filtered CDS 546617 546758 . + 0 ID=CDS:909881;Parent=Transcript:909881;Name=Al_scaffold_0001_135 +scaffold_1 JGI_Filtered exon 546853 547142 . + . ID=exon:909881;Parent=Transcript:909881 +scaffold_1 JGI_Filtered CDS 546853 547142 . + 1 ID=CDS:909881;Parent=Transcript:909881;Name=Al_scaffold_0001_135 +scaffold_1 JGI_Filtered exon 547692 547760 . + . ID=exon:909881;Parent=Transcript:909881 +scaffold_1 JGI_Filtered CDS 547692 547760 . + 0 ID=CDS:909881;Parent=Transcript:909881;Name=Al_scaffold_0001_135 +scaffold_1 JGI_Filtered exon 548012 548110 . + . ID=exon:909881;Parent=Transcript:909881 +scaffold_1 JGI_Filtered CDS 548012 548110 . + 0 ID=CDS:909881;Parent=Transcript:909881;Name=Al_scaffold_0001_135 +scaffold_1 JGI_Filtered gene 548765 550572 . - . ID=scaffold_100153.1;Name=scaffold_100153.1 +scaffold_1 JGI_Filtered mRNA 548765 550572 . - . ID=Transcript:918872;Name=Transcript:918872;Parent=scaffold_100153.1 +scaffold_1 JGI_Filtered three_prime_UTR 548765 548934 . - . ID=three_prime_UTR:918872;Parent=Transcript:918872 +scaffold_1 JGI_Filtered three_prime_UTR 549358 549631 . - . ID=three_prime_UTR:918872;Parent=Transcript:918872 +scaffold_1 JGI_Filtered exon 548765 548934 . - . ID=exon:918872;Parent=Transcript:918872 +scaffold_1 JGI_Filtered exon 549358 549631 . - . ID=exon:918872;Parent=Transcript:918872 +scaffold_1 JGI_Filtered CDS 549358 549631 . - 0 ID=CDS:918872;Parent=Transcript:918872;Name=scaffold_100153.1 +scaffold_1 JGI_Filtered exon 549730 549903 . - . ID=exon:918872;Parent=Transcript:918872 +scaffold_1 JGI_Filtered CDS 549730 549903 . - 1 ID=CDS:918872;Parent=Transcript:918872;Name=scaffold_100153.1 +scaffold_1 JGI_Filtered CDS 549730 548934 . - 0 ID=CDS:918872;Parent=Transcript:918872;Name=scaffold_100153.1 +scaffold_1 JGI_Filtered exon 550545 550572 . - . ID=exon:918872;Parent=Transcript:918872 +scaffold_1 JGI_Filtered CDS 550545 550552 . - 1 ID=CDS:918872;Parent=Transcript:918872;Name=scaffold_100153.1 +scaffold_1 JGI_Filtered five_prime_UTR 550553 550572 . - . ID=five_prime_UTR:918872;Parent=Transcript:918872 +scaffold_1 JGI_Filtered gene 551918 553479 . - . ID=fgenesh1_pm.C_scaffold_1000114;Name=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered mRNA 551918 553479 . - . ID=Transcript:311334;Name=Transcript:311334;Parent=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered exon 551918 552115 . - . ID=exon:311334;Parent=Transcript:311334 +scaffold_1 JGI_Filtered CDS 551918 552115 . - 0 ID=CDS:311334;Parent=Transcript:311334;Name=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered exon 552211 552333 . - . ID=exon:311334;Parent=Transcript:311334 +scaffold_1 JGI_Filtered CDS 552211 552333 . - 0 ID=CDS:311334;Parent=Transcript:311334;Name=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered exon 552431 552685 . - . ID=exon:311334;Parent=Transcript:311334 +scaffold_1 JGI_Filtered CDS 552431 552685 . - 0 ID=CDS:311334;Parent=Transcript:311334;Name=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered exon 552769 552915 . - . ID=exon:311334;Parent=Transcript:311334 +scaffold_1 JGI_Filtered CDS 552769 552915 . - 0 ID=CDS:311334;Parent=Transcript:311334;Name=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered exon 552984 553240 . - . ID=exon:311334;Parent=Transcript:311334 +scaffold_1 JGI_Filtered CDS 552984 553240 . - 0 ID=CDS:311334;Parent=Transcript:311334;Name=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered exon 553326 553479 . - . ID=exon:311334;Parent=Transcript:311334 +scaffold_1 JGI_Filtered CDS 553326 553479 . - 2 ID=CDS:311334;Parent=Transcript:311334;Name=fgenesh1_pm.C_scaffold_1000114 +scaffold_1 JGI_Filtered gene 555254 556901 . - . ID=Al_scaffold_0001_137;Name=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered mRNA 555254 556901 . - . ID=Transcript:909883;Name=Transcript:909883;Parent=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered exon 555254 555403 . - . ID=exon:909883;Parent=Transcript:909883 +scaffold_1 JGI_Filtered CDS 555254 555403 . - 0 ID=CDS:909883;Parent=Transcript:909883;Name=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered exon 555531 555650 . - . ID=exon:909883;Parent=Transcript:909883 +scaffold_1 JGI_Filtered CDS 555531 555650 . - 0 ID=CDS:909883;Parent=Transcript:909883;Name=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered exon 555737 556000 . - . ID=exon:909883;Parent=Transcript:909883 +scaffold_1 JGI_Filtered CDS 555737 556000 . - 0 ID=CDS:909883;Parent=Transcript:909883;Name=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered exon 556090 556221 . - . ID=exon:909883;Parent=Transcript:909883 +scaffold_1 JGI_Filtered CDS 556090 556221 . - 0 ID=CDS:909883;Parent=Transcript:909883;Name=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered exon 556405 556667 . - . ID=exon:909883;Parent=Transcript:909883 +scaffold_1 JGI_Filtered CDS 556405 556667 . - 0 ID=CDS:909883;Parent=Transcript:909883;Name=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered exon 556748 556901 . - . ID=exon:909883;Parent=Transcript:909883 +scaffold_1 JGI_Filtered CDS 556748 556901 . - 2 ID=CDS:909883;Parent=Transcript:909883;Name=Al_scaffold_0001_137 +scaffold_1 JGI_Filtered gene 558177 558994 . - . ID=fgenesh1_pg.C_scaffold_1000123;Name=fgenesh1_pg.C_scaffold_1000123 +scaffold_1 JGI_Filtered mRNA 558177 558994 . - . ID=Transcript:333558;Name=Transcript:333558;Parent=fgenesh1_pg.C_scaffold_1000123 +scaffold_1 JGI_Filtered exon 558177 558272 . - . ID=exon:333558;Parent=Transcript:333558 +scaffold_1 JGI_Filtered CDS 558177 558272 . - 0 ID=CDS:333558;Parent=Transcript:333558;Name=fgenesh1_pg.C_scaffold_1000123 +scaffold_1 JGI_Filtered exon 558349 558749 . - . ID=exon:333558;Parent=Transcript:333558 +scaffold_1 JGI_Filtered CDS 558349 558749 . - 0 ID=CDS:333558;Parent=Transcript:333558;Name=fgenesh1_pg.C_scaffold_1000123 +scaffold_1 JGI_Filtered exon 558841 558994 . - . ID=exon:333558;Parent=Transcript:333558 +scaffold_1 JGI_Filtered CDS 558841 558994 . - 2 ID=CDS:333558;Parent=Transcript:333558;Name=fgenesh1_pg.C_scaffold_1000123 +scaffold_1 JGI_Filtered gene 560362 562206 . - . ID=fgenesh2_kg.1__141__AT1G02260.1;Name=fgenesh2_kg.1__141__AT1G02260.1 +scaffold_1 JGI_Filtered mRNA 560362 562206 . - . ID=Transcript:470187;Name=Transcript:470187;Parent=fgenesh2_kg.1__141__AT1G02260.1 +scaffold_1 JGI_Filtered three_prime_UTR 560362 560403 . - . ID=three_prime_UTR:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered three_prime_UTR 560430 560439 . - . ID=three_prime_UTR:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered three_prime_UTR 560459 560491 . - . ID=three_prime_UTR:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered exon 560362 560403 . - . ID=exon:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered exon 560430 560439 . - . ID=exon:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered exon 560459 560748 . - . ID=exon:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered CDS 560492 560748 . - 0 ID=CDS:470187;Parent=Transcript:470187;Name=fgenesh2_kg.1__141__AT1G02260.1 +scaffold_1 JGI_Filtered exon 560870 561059 . - . ID=exon:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered CDS 560870 561059 . - 2 ID=CDS:470187;Parent=Transcript:470187;Name=fgenesh2_kg.1__141__AT1G02260.1 +scaffold_1 JGI_Filtered exon 561149 562206 . - . ID=exon:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered CDS 561149 562201 . - 0 ID=CDS:470187;Parent=Transcript:470187;Name=fgenesh2_kg.1__141__AT1G02260.1 +scaffold_1 JGI_Filtered five_prime_UTR 562202 562206 . - . ID=five_prime_UTR:470187;Parent=Transcript:470187 +scaffold_1 JGI_Filtered gene 562997 566008 . - . ID=fgenesh2_kg.1__142__AT1G02270.1;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered mRNA 562997 566008 . - . ID=Transcript:470188;Name=Transcript:470188;Parent=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered three_prime_UTR 562997 563058 . - . ID=three_prime_UTR:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered exon 562997 563283 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 563059 563283 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 563386 563493 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 563386 563493 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 563746 563856 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 563746 563856 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 564001 564126 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 564001 564126 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 564236 564344 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 564236 564344 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 564431 564507 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 564431 564507 . - 1 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 564600 564820 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 564600 564820 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 565222 565327 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 565222 565327 . - 2 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 565420 565524 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 565420 565524 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 565603 565701 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 565603 565701 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 565787 565966 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered CDS 565787 565954 . - 0 ID=CDS:470188;Parent=Transcript:470188;Name=fgenesh2_kg.1__142__AT1G02270.1 +scaffold_1 JGI_Filtered exon 565985 566008 . - . ID=exon:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered five_prime_UTR 565955 565966 . - . ID=five_prime_UTR:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered five_prime_UTR 565985 566008 . - . ID=five_prime_UTR:470188;Parent=Transcript:470188 +scaffold_1 JGI_Filtered gene 571279 572890 . - . ID=fgenesh1_pm.C_scaffold_1000118;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered mRNA 571279 572890 . - . ID=Transcript:311338;Name=Transcript:311338;Parent=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered exon 571279 571347 . - . ID=exon:311338;Parent=Transcript:311338 +scaffold_1 JGI_Filtered CDS 571279 571347 . - 0 ID=CDS:311338;Parent=Transcript:311338;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered exon 571427 571588 . - . ID=exon:311338;Parent=Transcript:311338 +scaffold_1 JGI_Filtered CDS 571427 571588 . - 0 ID=CDS:311338;Parent=Transcript:311338;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered exon 571666 571734 . - . ID=exon:311338;Parent=Transcript:311338 +scaffold_1 JGI_Filtered CDS 571666 571734 . - 0 ID=CDS:311338;Parent=Transcript:311338;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered exon 571835 572099 . - . ID=exon:311338;Parent=Transcript:311338 +scaffold_1 JGI_Filtered CDS 571835 572099 . - 0 ID=CDS:311338;Parent=Transcript:311338;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered exon 572353 572477 . - . ID=exon:311338;Parent=Transcript:311338 +scaffold_1 JGI_Filtered CDS 572353 572477 . - 1 ID=CDS:311338;Parent=Transcript:311338;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered exon 572583 572690 . - . ID=exon:311338;Parent=Transcript:311338 +scaffold_1 JGI_Filtered CDS 572583 572690 . - 0 ID=CDS:311338;Parent=Transcript:311338;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered exon 572795 572890 . - . ID=exon:311338;Parent=Transcript:311338 +scaffold_1 JGI_Filtered CDS 572795 572890 . - 0 ID=CDS:311338;Parent=Transcript:311338;Name=fgenesh1_pm.C_scaffold_1000118 +scaffold_1 JGI_Filtered gene 573275 574678 . - . ID=scaffold_100160.1;Name=scaffold_100160.1 +scaffold_1 JGI_Filtered mRNA 573275 574678 . - . ID=Transcript:918879;Name=Transcript:918879;Parent=scaffold_100160.1 +scaffold_1 JGI_Filtered three_prime_UTR 573275 573294 . - . ID=three_prime_UTR:918879;Parent=Transcript:918879 +scaffold_1 JGI_Filtered exon 573275 574678 . - . ID=exon:918879;Parent=Transcript:918879 +scaffold_1 JGI_Filtered CDS 573295 574656 . - 0 ID=CDS:918879;Parent=Transcript:918879;Name=scaffold_100160.1 +scaffold_1 JGI_Filtered five_prime_UTR 574657 574678 . - . ID=five_prime_UTR:918879;Parent=Transcript:918879 +scaffold_1 JGI_Filtered gene 575814 577930 . + . ID=scaffold_100161.1;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered mRNA 575814 577930 . + . ID=Transcript:918880;Name=Transcript:918880;Parent=scaffold_100161.1 +scaffold_1 JGI_Filtered five_prime_UTR 575814 575833 . + . ID=five_prime_UTR:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered exon 575814 575911 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 575834 575911 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 576124 576177 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 576124 576177 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 576260 576340 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 576260 576340 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 576425 576581 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 576425 576581 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 576686 576690 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 576686 576690 . + 1 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 576773 576847 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 576773 576847 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 576938 577063 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 576938 577063 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 577153 577371 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 577153 577371 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 577445 577558 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 577445 577558 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 577646 577681 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 577646 577681 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered exon 577774 577930 . + . ID=exon:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered CDS 577774 577908 . + 0 ID=CDS:918880;Parent=Transcript:918880;Name=scaffold_100161.1 +scaffold_1 JGI_Filtered three_prime_UTR 577909 577930 . + . ID=three_prime_UTR:918880;Parent=Transcript:918880 +scaffold_1 JGI_Filtered gene 578374 580449 . + . ID=scaffold_100162.1;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered mRNA 578374 580449 . + . ID=Transcript:918881;Name=Transcript:918881;Parent=scaffold_100162.1 +scaffold_1 JGI_Filtered five_prime_UTR 578374 578393 . + . ID=five_prime_UTR:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered exon 578374 578474 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 578394 578474 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 578602 578655 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 578602 578655 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 578739 578819 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 578739 578819 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 578910 579066 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 578910 579066 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 579176 579180 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 579176 579180 . + 1 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 579263 579337 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 579263 579337 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 579430 579555 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 579430 579555 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 579644 579862 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 579644 579862 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 579944 580057 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 579944 580057 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 580148 580183 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 580148 580183 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered exon 580293 580449 . + . ID=exon:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered CDS 580293 580427 . + 0 ID=CDS:918881;Parent=Transcript:918881;Name=scaffold_100162.1 +scaffold_1 JGI_Filtered three_prime_UTR 580428 580449 . + . ID=three_prime_UTR:918881;Parent=Transcript:918881 +scaffold_1 JGI_Filtered gene 580593 583503 . - . ID=fgenesh2_kg.1__146__AT1G02310.1;Name=fgenesh2_kg.1__146__AT1G02310.1 +scaffold_1 JGI_Filtered mRNA 580593 583503 . - . ID=Transcript:470192;Name=Transcript:470192;Parent=fgenesh2_kg.1__146__AT1G02310.1 +scaffold_1 JGI_Filtered three_prime_UTR 580593 580669 . - . ID=three_prime_UTR:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered three_prime_UTR 580692 580707 . - . ID=three_prime_UTR:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered exon 580593 580669 . - . ID=exon:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered exon 580692 581101 . - . ID=exon:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered CDS 580708 581101 . - 0 ID=CDS:470192;Parent=Transcript:470192;Name=fgenesh2_kg.1__146__AT1G02310.1 +scaffold_1 JGI_Filtered exon 581199 581407 . - . ID=exon:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered CDS 581199 581407 . - 1 ID=CDS:470192;Parent=Transcript:470192;Name=fgenesh2_kg.1__146__AT1G02310.1 +scaffold_1 JGI_Filtered exon 581820 581939 . - . ID=exon:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered CDS 581820 581939 . - 0 ID=CDS:470192;Parent=Transcript:470192;Name=fgenesh2_kg.1__146__AT1G02310.1 +scaffold_1 JGI_Filtered exon 582310 582489 . - . ID=exon:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered CDS 582310 582489 . - 0 ID=CDS:470192;Parent=Transcript:470192;Name=fgenesh2_kg.1__146__AT1G02310.1 +scaffold_1 JGI_Filtered exon 583123 583503 . - . ID=exon:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered CDS 583123 583452 . - 0 ID=CDS:470192;Parent=Transcript:470192;Name=fgenesh2_kg.1__146__AT1G02310.1 +scaffold_1 JGI_Filtered five_prime_UTR 583453 583503 . - . ID=five_prime_UTR:470192;Parent=Transcript:470192 +scaffold_1 JGI_Filtered gene 584904 586271 . - . ID=scaffold_100164.1;Name=scaffold_100164.1 +scaffold_1 JGI_Filtered mRNA 584904 586271 . - . ID=Transcript:918883;Name=Transcript:918883;Parent=scaffold_100164.1 +scaffold_1 JGI_Filtered three_prime_UTR 584904 584923 . - . ID=three_prime_UTR:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered exon 584904 585102 . - . ID=exon:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered CDS 584924 585102 . - 0 ID=CDS:918883;Parent=Transcript:918883;Name=scaffold_100164.1 +scaffold_1 JGI_Filtered exon 585199 585356 . - . ID=exon:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered CDS 585199 585356 . - 2 ID=CDS:918883;Parent=Transcript:918883;Name=scaffold_100164.1 +scaffold_1 JGI_Filtered exon 585447 585520 . - . ID=exon:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered CDS 585447 585520 . - 1 ID=CDS:918883;Parent=Transcript:918883;Name=scaffold_100164.1 +scaffold_1 JGI_Filtered exon 585613 585736 . - . ID=exon:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered CDS 585613 585736 . - 0 ID=CDS:918883;Parent=Transcript:918883;Name=scaffold_100164.1 +scaffold_1 JGI_Filtered exon 585842 586039 . - . ID=exon:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered CDS 585842 586039 . - 1 ID=CDS:918883;Parent=Transcript:918883;Name=scaffold_100164.1 +scaffold_1 JGI_Filtered exon 586151 586271 . - . ID=exon:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered CDS 586151 586251 . - 1 ID=CDS:918883;Parent=Transcript:918883;Name=scaffold_100164.1 +scaffold_1 JGI_Filtered five_prime_UTR 586252 586271 . - . ID=five_prime_UTR:918883;Parent=Transcript:918883 +scaffold_1 JGI_Filtered gene 586907 588010 . - . ID=fgenesh2_kg.1__148__AT1G02335.1;Name=fgenesh2_kg.1__148__AT1G02335.1 +scaffold_1 JGI_Filtered mRNA 586907 588010 . - . ID=Transcript:470194;Name=Transcript:470194;Parent=fgenesh2_kg.1__148__AT1G02335.1 +scaffold_1 JGI_Filtered three_prime_UTR 586907 587000 . - . ID=three_prime_UTR:470194;Parent=Transcript:470194 +scaffold_1 JGI_Filtered three_prime_UTR 587013 587049 . - . ID=three_prime_UTR:470194;Parent=Transcript:470194 +scaffold_1 JGI_Filtered exon 586907 587000 . - . ID=exon:470194;Parent=Transcript:470194 +scaffold_1 JGI_Filtered exon 587013 587594 . - . ID=exon:470194;Parent=Transcript:470194 +scaffold_1 JGI_Filtered CDS 587050 587594 . - 0 ID=CDS:470194;Parent=Transcript:470194;Name=fgenesh2_kg.1__148__AT1G02335.1 +scaffold_1 JGI_Filtered exon 587853 588010 . - . ID=exon:470194;Parent=Transcript:470194 +scaffold_1 JGI_Filtered CDS 587853 587964 . - 2 ID=CDS:470194;Parent=Transcript:470194;Name=fgenesh2_kg.1__148__AT1G02335.1 +scaffold_1 JGI_Filtered five_prime_UTR 587965 588010 . - . ID=five_prime_UTR:470194;Parent=Transcript:470194 +scaffold_1 JGI_Filtered gene 589088 590693 . - . ID=fgenesh1_pg.C_scaffold_1000130;Name=fgenesh1_pg.C_scaffold_1000130 +scaffold_1 JGI_Filtered mRNA 589088 590693 . - . ID=Transcript:333565;Name=Transcript:333565;Parent=fgenesh1_pg.C_scaffold_1000130 +scaffold_1 JGI_Filtered exon 589088 589402 . - . ID=exon:333565;Parent=Transcript:333565 +scaffold_1 JGI_Filtered CDS 589088 589402 . - 0 ID=CDS:333565;Parent=Transcript:333565;Name=fgenesh1_pg.C_scaffold_1000130 +scaffold_1 JGI_Filtered exon 589931 589996 . - . ID=exon:333565;Parent=Transcript:333565 +scaffold_1 JGI_Filtered CDS 589931 589996 . - 0 ID=CDS:333565;Parent=Transcript:333565;Name=fgenesh1_pg.C_scaffold_1000130 +scaffold_1 JGI_Filtered exon 590149 590274 . - . ID=exon:333565;Parent=Transcript:333565 +scaffold_1 JGI_Filtered CDS 590149 590274 . - 0 ID=CDS:333565;Parent=Transcript:333565;Name=fgenesh1_pg.C_scaffold_1000130 +scaffold_1 JGI_Filtered exon 590361 590693 . - . ID=exon:333565;Parent=Transcript:333565 +scaffold_1 JGI_Filtered CDS 590361 590693 . - 0 ID=CDS:333565;Parent=Transcript:333565;Name=fgenesh1_pg.C_scaffold_1000130 +scaffold_1 JGI_Filtered gene 594032 595496 . + . ID=fgenesh1_pg.C_scaffold_1000131;Name=fgenesh1_pg.C_scaffold_1000131 +scaffold_1 JGI_Filtered mRNA 594032 595496 . + . ID=Transcript:333566;Name=Transcript:333566;Parent=fgenesh1_pg.C_scaffold_1000131 +scaffold_1 JGI_Filtered exon 594032 594120 . + . ID=exon:333566;Parent=Transcript:333566 +scaffold_1 JGI_Filtered CDS 594032 594120 . + 0 ID=CDS:333566;Parent=Transcript:333566;Name=fgenesh1_pg.C_scaffold_1000131 +scaffold_1 JGI_Filtered exon 594739 594825 . + . ID=exon:333566;Parent=Transcript:333566 +scaffold_1 JGI_Filtered CDS 594739 594825 . + 2 ID=CDS:333566;Parent=Transcript:333566;Name=fgenesh1_pg.C_scaffold_1000131 +scaffold_1 JGI_Filtered exon 595015 595096 . + . ID=exon:333566;Parent=Transcript:333566 +scaffold_1 JGI_Filtered CDS 595015 595096 . + 2 ID=CDS:333566;Parent=Transcript:333566;Name=fgenesh1_pg.C_scaffold_1000131 +scaffold_1 JGI_Filtered exon 595308 595496 . + . ID=exon:333566;Parent=Transcript:333566 +scaffold_1 JGI_Filtered CDS 595308 595496 . + 0 ID=CDS:333566;Parent=Transcript:333566;Name=fgenesh1_pg.C_scaffold_1000131 +scaffold_1 JGI_Filtered gene 595629 595881 . - . ID=scaffold_100168.1;Name=scaffold_100168.1 +scaffold_1 JGI_Filtered mRNA 595629 595881 . - . ID=Transcript:918887;Name=Transcript:918887;Parent=scaffold_100168.1 +scaffold_1 JGI_Filtered three_prime_UTR 595629 595649 . - . ID=three_prime_UTR:918887;Parent=Transcript:918887 +scaffold_1 JGI_Filtered exon 595629 595881 . - . ID=exon:918887;Parent=Transcript:918887 +scaffold_1 JGI_Filtered CDS 595650 595859 . - 0 ID=CDS:918887;Parent=Transcript:918887;Name=scaffold_100168.1 +scaffold_1 JGI_Filtered five_prime_UTR 595860 595881 . - . ID=five_prime_UTR:918887;Parent=Transcript:918887 +scaffold_1 JGI_Filtered gene 596769 597999 . - . ID=scaffold_100169.1;Name=scaffold_100169.1 +scaffold_1 JGI_Filtered mRNA 596769 597999 . - . ID=Transcript:918888;Name=Transcript:918888;Parent=scaffold_100169.1 +scaffold_1 JGI_Filtered three_prime_UTR 596769 596788 . - . ID=three_prime_UTR:918888;Parent=Transcript:918888 +scaffold_1 JGI_Filtered exon 596769 597158 . - . ID=exon:918888;Parent=Transcript:918888 +scaffold_1 JGI_Filtered CDS 596789 597158 . - 0 ID=CDS:918888;Parent=Transcript:918888;Name=scaffold_100169.1 +scaffold_1 JGI_Filtered exon 597534 597999 . - . ID=exon:918888;Parent=Transcript:918888 +scaffold_1 JGI_Filtered CDS 597534 597979 . - 1 ID=CDS:918888;Parent=Transcript:918888;Name=scaffold_100169.1 +scaffold_1 JGI_Filtered five_prime_UTR 597980 597999 . - . ID=five_prime_UTR:918888;Parent=Transcript:918888 +scaffold_1 JGI_Filtered gene 599259 601154 . + . ID=fgenesh2_kg.1__150__AT1G02370.1;Name=fgenesh2_kg.1__150__AT1G02370.1 +scaffold_1 JGI_Filtered mRNA 599259 601154 . + . ID=Transcript:470196;Name=Transcript:470196;Parent=fgenesh2_kg.1__150__AT1G02370.1 +scaffold_1 JGI_Filtered five_prime_UTR 599259 599266 . + . ID=five_prime_UTR:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered exon 599259 599353 . + . ID=exon:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered CDS 599267 599353 . + 0 ID=CDS:470196;Parent=Transcript:470196;Name=fgenesh2_kg.1__150__AT1G02370.1 +scaffold_1 JGI_Filtered exon 599354 599599 . + . ID=exon:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered CDS 599354 599599 . + 0 ID=CDS:470196;Parent=Transcript:470196;Name=fgenesh2_kg.1__150__AT1G02370.1 +scaffold_1 JGI_Filtered exon 599766 601012 . + . ID=exon:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered CDS 599766 601007 . + 0 ID=CDS:470196;Parent=Transcript:470196;Name=fgenesh2_kg.1__150__AT1G02370.1 +scaffold_1 JGI_Filtered exon 601027 601124 . + . ID=exon:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered exon 601138 601154 . + . ID=exon:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered three_prime_UTR 601008 601012 . + . ID=three_prime_UTR:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered three_prime_UTR 601027 601124 . + . ID=three_prime_UTR:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered three_prime_UTR 601138 601154 . + . ID=three_prime_UTR:470196;Parent=Transcript:470196 +scaffold_1 JGI_Filtered gene 601736 602094 . - . ID=scaffold_100171.1;Name=scaffold_100171.1 +scaffold_1 JGI_Filtered mRNA 601736 602094 . - . ID=Transcript:918890;Name=Transcript:918890;Parent=scaffold_100171.1 +scaffold_1 JGI_Filtered three_prime_UTR 601736 601756 . - . ID=three_prime_UTR:918890;Parent=Transcript:918890 +scaffold_1 JGI_Filtered exon 601736 602094 . - . ID=exon:918890;Parent=Transcript:918890 +scaffold_1 JGI_Filtered CDS 601757 602074 . - 0 ID=CDS:918890;Parent=Transcript:918890;Name=scaffold_100171.1 +scaffold_1 JGI_Filtered five_prime_UTR 602075 602094 . - . ID=five_prime_UTR:918890;Parent=Transcript:918890 +scaffold_1 JGI_Filtered gene 602514 603658 . + . ID=scaffold_100172.1;Name=scaffold_100172.1 +scaffold_1 JGI_Filtered mRNA 602514 603658 . + . ID=Transcript:918891;Name=Transcript:918891;Parent=scaffold_100172.1 +scaffold_1 JGI_Filtered five_prime_UTR 602514 602533 . + . ID=five_prime_UTR:918891;Parent=Transcript:918891 +scaffold_1 JGI_Filtered exon 602514 603023 . + . ID=exon:918891;Parent=Transcript:918891 +scaffold_1 JGI_Filtered CDS 602534 603023 . + 0 ID=CDS:918891;Parent=Transcript:918891;Name=scaffold_100172.1 +scaffold_1 JGI_Filtered exon 603306 603450 . + . ID=exon:918891;Parent=Transcript:918891 +scaffold_1 JGI_Filtered CDS 603306 603450 . + 1 ID=CDS:918891;Parent=Transcript:918891;Name=scaffold_100172.1 +scaffold_1 JGI_Filtered exon 603578 603658 . + . ID=exon:918891;Parent=Transcript:918891 +scaffold_1 JGI_Filtered CDS 603578 603638 . + 2 ID=CDS:918891;Parent=Transcript:918891;Name=scaffold_100172.1 +scaffold_1 JGI_Filtered three_prime_UTR 603639 603658 . + . ID=three_prime_UTR:918891;Parent=Transcript:918891 +scaffold_1 JGI_Filtered gene 605536 607891 . + . ID=fgenesh2_kg.1__152__AT1G02390.1;Name=fgenesh2_kg.1__152__AT1G02390.1 +scaffold_1 JGI_Filtered mRNA 605536 607891 . + . ID=Transcript:470198;Name=Transcript:470198;Parent=fgenesh2_kg.1__152__AT1G02390.1 +scaffold_1 JGI_Filtered five_prime_UTR 605536 605604 . + . ID=five_prime_UTR:470198;Parent=Transcript:470198 +scaffold_1 JGI_Filtered exon 605536 606300 . + . ID=exon:470198;Parent=Transcript:470198 +scaffold_1 JGI_Filtered CDS 605605 606300 . + 0 ID=CDS:470198;Parent=Transcript:470198;Name=fgenesh2_kg.1__152__AT1G02390.1 +scaffold_1 JGI_Filtered exon 606872 607891 . + . ID=exon:470198;Parent=Transcript:470198 +scaffold_1 JGI_Filtered CDS 606872 607753 . + 0 ID=CDS:470198;Parent=Transcript:470198;Name=fgenesh2_kg.1__152__AT1G02390.1 +scaffold_1 JGI_Filtered three_prime_UTR 607754 607891 . + . ID=three_prime_UTR:470198;Parent=Transcript:470198 +scaffold_1 JGI_Filtered gene 612831 615239 . + . ID=Al_scaffold_0001_155;Name=Al_scaffold_0001_155 +scaffold_1 JGI_Filtered mRNA 612831 615239 . + . ID=Transcript:909901;Name=Transcript:909901;Parent=Al_scaffold_0001_155 +scaffold_1 JGI_Filtered exon 612831 613231 . + . ID=exon:909901;Parent=Transcript:909901 +scaffold_1 JGI_Filtered CDS 612831 613231 . + 0 ID=CDS:909901;Parent=Transcript:909901;Name=Al_scaffold_0001_155 +scaffold_1 JGI_Filtered exon 614580 614922 . + . ID=exon:909901;Parent=Transcript:909901 +scaffold_1 JGI_Filtered CDS 614580 614922 . + 2 ID=CDS:909901;Parent=Transcript:909901;Name=Al_scaffold_0001_155 +scaffold_1 JGI_Filtered exon 614994 615239 . + . ID=exon:909901;Parent=Transcript:909901 +scaffold_1 JGI_Filtered CDS 614994 615239 . + 0 ID=CDS:909901;Parent=Transcript:909901;Name=Al_scaffold_0001_155 +scaffold_1 JGI_Filtered gene 615826 616316 . - . ID=fgenesh2_kg.1__154__AT1G02405.1;Name=fgenesh2_kg.1__154__AT1G02405.1 +scaffold_1 JGI_Filtered mRNA 615826 616316 . - . ID=Transcript:470200;Name=Transcript:470200;Parent=fgenesh2_kg.1__154__AT1G02405.1 +scaffold_1 JGI_Filtered three_prime_UTR 615826 615856 . - . ID=three_prime_UTR:470200;Parent=Transcript:470200 +scaffold_1 JGI_Filtered three_prime_UTR 615889 615925 . - . ID=three_prime_UTR:470200;Parent=Transcript:470200 +scaffold_1 JGI_Filtered exon 615826 615856 . - . ID=exon:470200;Parent=Transcript:470200 +scaffold_1 JGI_Filtered exon 615889 616316 . - . ID=exon:470200;Parent=Transcript:470200 +scaffold_1 JGI_Filtered CDS 615926 616309 . - 0 ID=CDS:470200;Parent=Transcript:470200;Name=fgenesh2_kg.1__154__AT1G02405.1 +scaffold_1 JGI_Filtered five_prime_UTR 616310 616316 . - . ID=five_prime_UTR:470200;Parent=Transcript:470200 +scaffold_1 JGI_Filtered gene 617112 618613 . + . ID=scaffold_100176.1;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered mRNA 617112 618613 . + . ID=Transcript:918895;Name=Transcript:918895;Parent=scaffold_100176.1 +scaffold_1 JGI_Filtered five_prime_UTR 617112 617131 . + . ID=five_prime_UTR:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered exon 617112 617211 . + . ID=exon:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered CDS 617132 617211 . + 0 ID=CDS:918895;Parent=Transcript:918895;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered exon 617330 617645 . + . ID=exon:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered CDS 617330 617645 . + 2 ID=CDS:918895;Parent=Transcript:918895;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered exon 617746 617798 . + . ID=exon:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered CDS 617746 617798 . + 0 ID=CDS:918895;Parent=Transcript:918895;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered exon 617909 617981 . + . ID=exon:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered CDS 617909 617981 . + 2 ID=CDS:918895;Parent=Transcript:918895;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered exon 618072 618176 . + . ID=exon:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered CDS 618072 618176 . + 0 ID=CDS:918895;Parent=Transcript:918895;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered exon 618267 618347 . + . ID=exon:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered CDS 618267 618347 . + 0 ID=CDS:918895;Parent=Transcript:918895;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered exon 618438 618613 . + . ID=exon:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered CDS 618438 618593 . + 0 ID=CDS:918895;Parent=Transcript:918895;Name=scaffold_100176.1 +scaffold_1 JGI_Filtered three_prime_UTR 618594 618613 . + . ID=three_prime_UTR:918895;Parent=Transcript:918895 +scaffold_1 JGI_Filtered gene 620062 621534 . + . ID=fgenesh2_kg.1__156__AT1G02420.1;Name=fgenesh2_kg.1__156__AT1G02420.1 +scaffold_1 JGI_Filtered mRNA 620062 621534 . + . ID=Transcript:470202;Name=Transcript:470202;Parent=fgenesh2_kg.1__156__AT1G02420.1 +scaffold_1 JGI_Filtered exon 620062 621534 . + . ID=exon:470202;Parent=Transcript:470202 +scaffold_1 JGI_Filtered CDS 620062 621534 . + 0 ID=CDS:470202;Parent=Transcript:470202;Name=fgenesh2_kg.1__156__AT1G02420.1 +scaffold_1 JGI_Filtered gene 621551 622441 . - . ID=Al_scaffold_0001_159;Name=Al_scaffold_0001_159 +scaffold_1 JGI_Filtered mRNA 621551 622441 . - . ID=Transcript:909905;Name=Transcript:909905;Parent=Al_scaffold_0001_159 +scaffold_1 JGI_Filtered exon 621551 621635 . - . ID=exon:909905;Parent=Transcript:909905 +scaffold_1 JGI_Filtered CDS 621551 621635 . - 0 ID=CDS:909905;Parent=Transcript:909905;Name=Al_scaffold_0001_159 +scaffold_1 JGI_Filtered exon 621726 621865 . - . ID=exon:909905;Parent=Transcript:909905 +scaffold_1 JGI_Filtered CDS 621726 621865 . - 1 ID=CDS:909905;Parent=Transcript:909905;Name=Al_scaffold_0001_159 +scaffold_1 JGI_Filtered exon 621937 622056 . - . ID=exon:909905;Parent=Transcript:909905 +scaffold_1 JGI_Filtered CDS 621937 622056 . - 0 ID=CDS:909905;Parent=Transcript:909905;Name=Al_scaffold_0001_159 +scaffold_1 JGI_Filtered exon 622129 622205 . - . ID=exon:909905;Parent=Transcript:909905 +scaffold_1 JGI_Filtered CDS 622129 622205 . - 0 ID=CDS:909905;Parent=Transcript:909905;Name=Al_scaffold_0001_159 +scaffold_1 JGI_Filtered exon 622291 622441 . - . ID=exon:909905;Parent=Transcript:909905 +scaffold_1 JGI_Filtered CDS 622291 622441 . - 2 ID=CDS:909905;Parent=Transcript:909905;Name=Al_scaffold_0001_159 +scaffold_1 JGI_Filtered gene 622888 623335 . - . ID=fgenesh2_kg.1__159__AT1G02450.1;Name=fgenesh2_kg.1__159__AT1G02450.1 +scaffold_1 JGI_Filtered mRNA 622888 623335 . - . ID=Transcript:470205;Name=Transcript:470205;Parent=fgenesh2_kg.1__159__AT1G02450.1 +scaffold_1 JGI_Filtered three_prime_UTR 622888 622890 . - . ID=three_prime_UTR:470205;Parent=Transcript:470205 +scaffold_1 JGI_Filtered exon 622888 623335 . - . ID=exon:470205;Parent=Transcript:470205 +scaffold_1 JGI_Filtered CDS 622891 623259 . - 0 ID=CDS:470205;Parent=Transcript:470205;Name=fgenesh2_kg.1__159__AT1G02450.1 +scaffold_1 JGI_Filtered five_prime_UTR 623260 623335 . - . ID=five_prime_UTR:470205;Parent=Transcript:470205 +scaffold_1 JGI_Filtered gene 628623 630888 . - . ID=scaffold_100180.1;Name=scaffold_100180.1 +scaffold_1 JGI_Filtered mRNA 628623 630888 . - . ID=Transcript:918899;Name=Transcript:918899;Parent=scaffold_100180.1 +scaffold_1 JGI_Filtered three_prime_UTR 628623 629153 . - . ID=three_prime_UTR:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered exon 628623 629153 . - . ID=exon:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered exon 629239 629323 . - . ID=exon:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered CDS 629239 629323 . - 1 ID=CDS:918899;Parent=Transcript:918899;Name=scaffold_100180.1 +scaffold_1 JGI_Filtered CDS 629239 629153 . - 0 ID=CDS:918899;Parent=Transcript:918899;Name=scaffold_100180.1 +scaffold_1 JGI_Filtered exon 629553 629760 . - . ID=exon:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered CDS 629553 629760 . - 2 ID=CDS:918899;Parent=Transcript:918899;Name=scaffold_100180.1 +scaffold_1 JGI_Filtered exon 629840 629887 . - . ID=exon:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered CDS 629840 629887 . - 0 ID=CDS:918899;Parent=Transcript:918899;Name=scaffold_100180.1 +scaffold_1 JGI_Filtered exon 630151 630318 . - . ID=exon:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered CDS 630151 630318 . - 0 ID=CDS:918899;Parent=Transcript:918899;Name=scaffold_100180.1 +scaffold_1 JGI_Filtered exon 630413 630888 . - . ID=exon:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered CDS 630413 630868 . - 0 ID=CDS:918899;Parent=Transcript:918899;Name=scaffold_100180.1 +scaffold_1 JGI_Filtered five_prime_UTR 630869 630888 . - . ID=five_prime_UTR:918899;Parent=Transcript:918899 +scaffold_1 JGI_Filtered gene 635225 636856 . - . ID=fgenesh2_kg.1__161__AT1G02470.2;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered mRNA 635225 636856 . - . ID=Transcript:470207;Name=Transcript:470207;Parent=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered three_prime_UTR 635225 635267 . - . ID=three_prime_UTR:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered three_prime_UTR 635487 635502 . - . ID=three_prime_UTR:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered three_prime_UTR 635518 635543 . - . ID=three_prime_UTR:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered three_prime_UTR 635561 635671 . - . ID=three_prime_UTR:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered three_prime_UTR 635759 635806 . - . ID=three_prime_UTR:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered three_prime_UTR 635896 635944 . - . ID=three_prime_UTR:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered exon 635225 635267 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered exon 635487 635502 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered exon 635518 635543 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered exon 635561 635671 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered exon 635759 635806 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered CDS 635759 635806 . - 0 ID=CDS:470207;Parent=Transcript:470207;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered exon 635896 635944 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered CDS 635896 635944 . - 0 ID=CDS:470207;Parent=Transcript:470207;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered exon 636058 636110 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered CDS 636058 636110 . - 1 ID=CDS:470207;Parent=Transcript:470207;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered CDS 636058 635671 . - 0 ID=CDS:470207;Parent=Transcript:470207;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered exon 636202 636297 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered CDS 636202 636297 . - 0 ID=CDS:470207;Parent=Transcript:470207;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered exon 636366 636468 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered CDS 636366 636468 . - 0 ID=CDS:470207;Parent=Transcript:470207;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered exon 636562 636856 . - . ID=exon:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered CDS 636562 636818 . - 1 ID=CDS:470207;Parent=Transcript:470207;Name=fgenesh2_kg.1__161__AT1G02470.2 +scaffold_1 JGI_Filtered five_prime_UTR 636819 636856 . - . ID=five_prime_UTR:470207;Parent=Transcript:470207 +scaffold_1 JGI_Filtered gene 637376 638578 . - . ID=fgenesh1_pm.C_scaffold_1000137;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered mRNA 637376 638578 . - . ID=Transcript:311357;Name=Transcript:311357;Parent=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered three_prime_UTR 637376 637450 . - . ID=three_prime_UTR:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered three_prime_UTR 637536 637583 . - . ID=three_prime_UTR:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered three_prime_UTR 637685 637733 . - . ID=three_prime_UTR:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered exon 637376 637450 . - . ID=exon:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered exon 637536 637583 . - . ID=exon:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered CDS 637536 637583 . - 0 ID=CDS:311357;Parent=Transcript:311357;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered exon 637685 637733 . - . ID=exon:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered CDS 637685 637733 . - 0 ID=CDS:311357;Parent=Transcript:311357;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered exon 637814 637866 . - . ID=exon:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered CDS 637814 637866 . - 1 ID=CDS:311357;Parent=Transcript:311357;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered CDS 637814 637450 . - 0 ID=CDS:311357;Parent=Transcript:311357;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered exon 637927 638040 . - . ID=exon:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered CDS 637927 638040 . - 0 ID=CDS:311357;Parent=Transcript:311357;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered exon 638141 638240 . - . ID=exon:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered CDS 638141 638240 . - 0 ID=CDS:311357;Parent=Transcript:311357;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered exon 638358 638578 . - . ID=exon:311357;Parent=Transcript:311357 +scaffold_1 JGI_Filtered CDS 638358 638578 . - 1 ID=CDS:311357;Parent=Transcript:311357;Name=fgenesh1_pm.C_scaffold_1000137 +scaffold_1 JGI_Filtered gene 650407 652252 . + . ID=fgenesh2_kg.1__164__AT1G02500.1;Name=fgenesh2_kg.1__164__AT1G02500.1 +scaffold_1 JGI_Filtered mRNA 650407 652252 . + . ID=Transcript:470210;Name=Transcript:470210;Parent=fgenesh2_kg.1__164__AT1G02500.1 +scaffold_1 JGI_Filtered five_prime_UTR 650407 650450 . + . ID=five_prime_UTR:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered five_prime_UTR 650478 650536 . + . ID=five_prime_UTR:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered five_prime_UTR 650854 650859 . + . ID=five_prime_UTR:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered exon 650407 650450 . + . ID=exon:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered exon 650478 650536 . + . ID=exon:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered exon 650854 651015 . + . ID=exon:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered CDS 650860 651015 . + 0 ID=CDS:470210;Parent=Transcript:470210;Name=fgenesh2_kg.1__164__AT1G02500.1 +scaffold_1 JGI_Filtered exon 651060 652252 . + . ID=exon:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered CDS 651060 652040 . + 0 ID=CDS:470210;Parent=Transcript:470210;Name=fgenesh2_kg.1__164__AT1G02500.1 +scaffold_1 JGI_Filtered three_prime_UTR 652041 652252 . + . ID=three_prime_UTR:470210;Parent=Transcript:470210 +scaffold_1 JGI_Filtered gene 652374 653539 . - . ID=fgenesh2_kg.1__166__AT1G02510.1;Name=fgenesh2_kg.1__166__AT1G02510.1 +scaffold_1 JGI_Filtered mRNA 652374 653539 . - . ID=Transcript:470212;Name=Transcript:470212;Parent=fgenesh2_kg.1__166__AT1G02510.1 +scaffold_1 JGI_Filtered three_prime_UTR 652374 652557 . - . ID=three_prime_UTR:470212;Parent=Transcript:470212 +scaffold_1 JGI_Filtered exon 652374 652675 . - . ID=exon:470212;Parent=Transcript:470212 +scaffold_1 JGI_Filtered CDS 652558 652675 . - 0 ID=CDS:470212;Parent=Transcript:470212;Name=fgenesh2_kg.1__166__AT1G02510.1 +scaffold_1 JGI_Filtered exon 652761 653539 . - . ID=exon:470212;Parent=Transcript:470212 +scaffold_1 JGI_Filtered CDS 652761 653506 . - 1 ID=CDS:470212;Parent=Transcript:470212;Name=fgenesh2_kg.1__166__AT1G02510.1 +scaffold_1 JGI_Filtered five_prime_UTR 653507 653539 . - . ID=five_prime_UTR:470212;Parent=Transcript:470212 +scaffold_1 JGI_Filtered gene 655997 667583 . + . ID=fgenesh2_kg.1__167__AT1G02530.1;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered mRNA 655997 667583 . + . ID=Transcript:470213;Name=Transcript:470213;Parent=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered five_prime_UTR 655997 656037 . + . ID=five_prime_UTR:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered exon 655997 656098 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 656038 656098 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 656141 656343 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 656141 656343 . + 1 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 656427 656481 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 656427 656481 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 656594 656767 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 656594 656767 . + 1 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 656847 657070 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 656847 657070 . + 1 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 657154 657392 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 657154 657392 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 664241 665921 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 664241 665921 . + 2 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 666025 666291 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 666025 666291 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 666319 666324 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 666319 666324 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 666377 666634 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 666377 666634 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 666717 667016 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 666717 667016 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 667112 667467 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered CDS 667112 667465 . + 0 ID=CDS:470213;Parent=Transcript:470213;Name=fgenesh2_kg.1__167__AT1G02530.1 +scaffold_1 JGI_Filtered exon 667511 667583 . + . ID=exon:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered three_prime_UTR 667466 667467 . + . ID=three_prime_UTR:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered three_prime_UTR 667511 667583 . + . ID=three_prime_UTR:470213;Parent=Transcript:470213 +scaffold_1 JGI_Filtered gene 668474 669242 . + . ID=scaffold_100187.1;Name=scaffold_100187.1 +scaffold_1 JGI_Filtered mRNA 668474 669242 . + . ID=Transcript:918906;Name=Transcript:918906;Parent=scaffold_100187.1 +scaffold_1 JGI_Filtered five_prime_UTR 668474 668493 . + . ID=five_prime_UTR:918906;Parent=Transcript:918906 +scaffold_1 JGI_Filtered exon 668474 669242 . + . ID=exon:918906;Parent=Transcript:918906 +scaffold_1 JGI_Filtered CDS 668494 669222 . + 0 ID=CDS:918906;Parent=Transcript:918906;Name=scaffold_100187.1 +scaffold_1 JGI_Filtered three_prime_UTR 669223 669242 . + . ID=three_prime_UTR:918906;Parent=Transcript:918906 +scaffold_1 JGI_Filtered gene 670715 672588 . + . ID=scaffold_100188.1;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered mRNA 670715 672588 . + . ID=Transcript:918907;Name=Transcript:918907;Parent=scaffold_100188.1 +scaffold_1 JGI_Filtered five_prime_UTR 670715 670734 . + . ID=five_prime_UTR:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered exon 670715 670865 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 670735 670865 . + 0 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 670941 671060 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 670941 671060 . + 2 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 671141 671255 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 671141 671255 . + 2 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 671345 671437 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 671345 671437 . + 0 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 671527 671572 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 671527 671572 . + 0 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 671683 671755 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 671683 671755 . + 1 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 672014 672048 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 672014 672048 . + 2 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 672151 672239 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 672151 672239 . + 1 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered exon 672374 672588 . + . ID=exon:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered CDS 672374 672568 . + 0 ID=CDS:918907;Parent=Transcript:918907;Name=scaffold_100188.1 +scaffold_1 JGI_Filtered three_prime_UTR 672569 672588 . + . ID=three_prime_UTR:918907;Parent=Transcript:918907 +scaffold_1 JGI_Filtered gene 673517 676258 . + . ID=fgenesh1_pm.C_scaffold_1000142;Name=fgenesh1_pm.C_scaffold_1000142 +scaffold_1 JGI_Filtered mRNA 673517 676258 . + . ID=Transcript:311362;Name=Transcript:311362;Parent=fgenesh1_pm.C_scaffold_1000142 +scaffold_1 JGI_Filtered exon 673517 673929 . + . ID=exon:311362;Parent=Transcript:311362 +scaffold_1 JGI_Filtered CDS 673517 673929 . + 0 ID=CDS:311362;Parent=Transcript:311362;Name=fgenesh1_pm.C_scaffold_1000142 +scaffold_1 JGI_Filtered exon 673993 674230 . + . ID=exon:311362;Parent=Transcript:311362 +scaffold_1 JGI_Filtered CDS 673993 674230 . + 2 ID=CDS:311362;Parent=Transcript:311362;Name=fgenesh1_pm.C_scaffold_1000142 +scaffold_1 JGI_Filtered exon 675629 676258 . + . ID=exon:311362;Parent=Transcript:311362 +scaffold_1 JGI_Filtered CDS 675629 676258 . + 0 ID=CDS:311362;Parent=Transcript:311362;Name=fgenesh1_pm.C_scaffold_1000142 +scaffold_1 JGI_Filtered gene 677676 682114 . + . ID=fgenesh2_kg.1__172__AT1G02580.1;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered mRNA 677676 682114 . + . ID=Transcript:470218;Name=Transcript:470218;Parent=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered five_prime_UTR 677676 677688 . + . ID=five_prime_UTR:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered exon 677676 677697 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 677689 677697 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 677863 677952 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 677863 677952 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 678601 678888 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 678601 678888 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 678996 679162 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 678996 679162 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 679259 679346 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 679259 679346 . + 2 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 679431 679556 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 679431 679556 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 679652 679699 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 679652 679699 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 679798 679866 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 679798 679866 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 679958 680106 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 679958 680106 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 680182 680308 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 680182 680308 . + 2 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 680405 680613 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 680405 680613 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 680697 680828 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 680697 680828 . + 2 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 680903 680984 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 680903 680984 . + 2 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 681069 681116 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 681069 681116 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 681257 681385 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 681257 681385 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 681465 681542 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 681465 681542 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered exon 681738 682114 . + . ID=exon:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered CDS 681738 681917 . + 0 ID=CDS:470218;Parent=Transcript:470218;Name=fgenesh2_kg.1__172__AT1G02580.1 +scaffold_1 JGI_Filtered three_prime_UTR 681918 682114 . + . ID=three_prime_UTR:470218;Parent=Transcript:470218 +scaffold_1 JGI_Filtered gene 684011 686672 . - . ID=Al_scaffold_0001_173;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered mRNA 684011 686672 . - . ID=Transcript:909919;Name=Transcript:909919;Parent=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered exon 684011 684091 . - . ID=exon:909919;Parent=Transcript:909919 +scaffold_1 JGI_Filtered CDS 684011 684091 . - 0 ID=CDS:909919;Parent=Transcript:909919;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered exon 684261 684356 . - . ID=exon:909919;Parent=Transcript:909919 +scaffold_1 JGI_Filtered CDS 684261 684356 . - 0 ID=CDS:909919;Parent=Transcript:909919;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered exon 684465 684542 . - . ID=exon:909919;Parent=Transcript:909919 +scaffold_1 JGI_Filtered CDS 684465 684542 . - 0 ID=CDS:909919;Parent=Transcript:909919;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered exon 685439 685577 . - . ID=exon:909919;Parent=Transcript:909919 +scaffold_1 JGI_Filtered CDS 685439 685577 . - 0 ID=CDS:909919;Parent=Transcript:909919;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered exon 685691 685758 . - . ID=exon:909919;Parent=Transcript:909919 +scaffold_1 JGI_Filtered CDS 685691 685758 . - 1 ID=CDS:909919;Parent=Transcript:909919;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered exon 686371 686442 . - . ID=exon:909919;Parent=Transcript:909919 +scaffold_1 JGI_Filtered CDS 686371 686442 . - 0 ID=CDS:909919;Parent=Transcript:909919;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered exon 686544 686672 . - . ID=exon:909919;Parent=Transcript:909919 +scaffold_1 JGI_Filtered CDS 686544 686672 . - 0 ID=CDS:909919;Parent=Transcript:909919;Name=Al_scaffold_0001_173 +scaffold_1 JGI_Filtered gene 689175 690417 . + . ID=scaffold_100193.1;Name=scaffold_100193.1 +scaffold_1 JGI_Filtered mRNA 689175 690417 . + . ID=Transcript:918912;Name=Transcript:918912;Parent=scaffold_100193.1 +scaffold_1 JGI_Filtered five_prime_UTR 689175 689194 . + . ID=five_prime_UTR:918912;Parent=Transcript:918912 +scaffold_1 JGI_Filtered exon 689175 689323 . + . ID=exon:918912;Parent=Transcript:918912 +scaffold_1 JGI_Filtered CDS 689195 689323 . + 0 ID=CDS:918912;Parent=Transcript:918912;Name=scaffold_100193.1 +scaffold_1 JGI_Filtered exon 689730 689861 . + . ID=exon:918912;Parent=Transcript:918912 +scaffold_1 JGI_Filtered CDS 689730 689861 . + 0 ID=CDS:918912;Parent=Transcript:918912;Name=scaffold_100193.1 +scaffold_1 JGI_Filtered exon 690077 690417 . + . ID=exon:918912;Parent=Transcript:918912 +scaffold_1 JGI_Filtered CDS 690077 690397 . + 0 ID=CDS:918912;Parent=Transcript:918912;Name=scaffold_100193.1 +scaffold_1 JGI_Filtered three_prime_UTR 690398 690417 . + . ID=three_prime_UTR:918912;Parent=Transcript:918912 +scaffold_1 JGI_Filtered gene 691077 693903 . - . ID=scaffold_100194.1;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered mRNA 691077 693903 . - . ID=Transcript:918913;Name=Transcript:918913;Parent=scaffold_100194.1 +scaffold_1 JGI_Filtered three_prime_UTR 691077 691096 . - . ID=three_prime_UTR:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered exon 691077 691305 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 691097 691305 . - 0 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered exon 691389 691680 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 691389 691680 . - 2 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered exon 691818 691915 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 691818 691915 . - 0 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered exon 692299 692416 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 692299 692416 . - 2 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered exon 692657 692707 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 692657 692707 . - 0 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered exon 692779 692960 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 692779 692960 . - 0 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered exon 693231 693456 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 693231 693456 . - 2 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered exon 693881 693903 . - . ID=exon:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered CDS 693881 693883 . - 0 ID=CDS:918913;Parent=Transcript:918913;Name=scaffold_100194.1 +scaffold_1 JGI_Filtered five_prime_UTR 693884 693903 . - . ID=five_prime_UTR:918913;Parent=Transcript:918913 +scaffold_1 JGI_Filtered gene 695602 697254 . - . ID=fgenesh2_kg.1__175__AT1G02630.1;Name=fgenesh2_kg.1__175__AT1G02630.1 +scaffold_1 JGI_Filtered mRNA 695602 697254 . - . ID=Transcript:470221;Name=Transcript:470221;Parent=fgenesh2_kg.1__175__AT1G02630.1 +scaffold_1 JGI_Filtered three_prime_UTR 695602 695665 . - . ID=three_prime_UTR:470221;Parent=Transcript:470221 +scaffold_1 JGI_Filtered three_prime_UTR 695702 695746 . - . ID=three_prime_UTR:470221;Parent=Transcript:470221 +scaffold_1 JGI_Filtered exon 695602 695665 . - . ID=exon:470221;Parent=Transcript:470221 +scaffold_1 JGI_Filtered exon 695702 695746 . - . ID=exon:470221;Parent=Transcript:470221 +scaffold_1 JGI_Filtered exon 695885 696573 . - . ID=exon:470221;Parent=Transcript:470221 +scaffold_1 JGI_Filtered CDS 695885 696573 . - 0 ID=CDS:470221;Parent=Transcript:470221;Name=fgenesh2_kg.1__175__AT1G02630.1 +scaffold_1 JGI_Filtered exon 696733 697254 . - . ID=exon:470221;Parent=Transcript:470221 +scaffold_1 JGI_Filtered CDS 696733 697213 . - 2 ID=CDS:470221;Parent=Transcript:470221;Name=fgenesh2_kg.1__175__AT1G02630.1 +scaffold_1 JGI_Filtered five_prime_UTR 697214 697254 . - . ID=five_prime_UTR:470221;Parent=Transcript:470221 +scaffold_1 JGI_Filtered gene 698975 702489 . + . ID=fgenesh2_kg.1__176__AT1G02640.1;Name=fgenesh2_kg.1__176__AT1G02640.1 +scaffold_1 JGI_Filtered mRNA 698975 702489 . + . ID=Transcript:470222;Name=Transcript:470222;Parent=fgenesh2_kg.1__176__AT1G02640.1 +scaffold_1 JGI_Filtered five_prime_UTR 698975 698995 . + . ID=five_prime_UTR:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered exon 698975 699385 . + . ID=exon:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered CDS 698996 699385 . + 0 ID=CDS:470222;Parent=Transcript:470222;Name=fgenesh2_kg.1__176__AT1G02640.1 +scaffold_1 JGI_Filtered exon 700207 700485 . + . ID=exon:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered CDS 700207 700485 . + 0 ID=CDS:470222;Parent=Transcript:470222;Name=fgenesh2_kg.1__176__AT1G02640.1 +scaffold_1 JGI_Filtered exon 700568 700737 . + . ID=exon:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered CDS 700568 700737 . + 0 ID=CDS:470222;Parent=Transcript:470222;Name=fgenesh2_kg.1__176__AT1G02640.1 +scaffold_1 JGI_Filtered exon 700824 700921 . + . ID=exon:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered CDS 700824 700921 . + 2 ID=CDS:470222;Parent=Transcript:470222;Name=fgenesh2_kg.1__176__AT1G02640.1 +scaffold_1 JGI_Filtered exon 701009 702374 . + . ID=exon:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered CDS 701009 702363 . + 1 ID=CDS:470222;Parent=Transcript:470222;Name=fgenesh2_kg.1__176__AT1G02640.1 +scaffold_1 JGI_Filtered exon 702469 702489 . + . ID=exon:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered three_prime_UTR 702364 702374 . + . ID=three_prime_UTR:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered three_prime_UTR 702469 702489 . + . ID=three_prime_UTR:470222;Parent=Transcript:470222 +scaffold_1 JGI_Filtered gene 703482 705257 . + . ID=fgenesh2_kg.1__177__AT1G02650.1;Name=fgenesh2_kg.1__177__AT1G02650.1 +scaffold_1 JGI_Filtered mRNA 703482 705257 . + . ID=Transcript:470223;Name=Transcript:470223;Parent=fgenesh2_kg.1__177__AT1G02650.1 +scaffold_1 JGI_Filtered exon 703482 703517 . + . ID=exon:470223;Parent=Transcript:470223 +scaffold_1 JGI_Filtered CDS 703482 703517 . + 0 ID=CDS:470223;Parent=Transcript:470223;Name=fgenesh2_kg.1__177__AT1G02650.1 +scaffold_1 JGI_Filtered exon 703625 704016 . + . ID=exon:470223;Parent=Transcript:470223 +scaffold_1 JGI_Filtered CDS 703625 704016 . + 0 ID=CDS:470223;Parent=Transcript:470223;Name=fgenesh2_kg.1__177__AT1G02650.1 +scaffold_1 JGI_Filtered exon 704098 704912 . + . ID=exon:470223;Parent=Transcript:470223 +scaffold_1 JGI_Filtered CDS 704098 704912 . + 2 ID=CDS:470223;Parent=Transcript:470223;Name=fgenesh2_kg.1__177__AT1G02650.1 +scaffold_1 JGI_Filtered exon 704965 705158 . + . ID=exon:470223;Parent=Transcript:470223 +scaffold_1 JGI_Filtered CDS 704965 705158 . + 1 ID=CDS:470223;Parent=Transcript:470223;Name=fgenesh2_kg.1__177__AT1G02650.1 +scaffold_1 JGI_Filtered exon 705171 705257 . + . ID=exon:470223;Parent=Transcript:470223 +scaffold_1 JGI_Filtered CDS 705171 705257 . + 0 ID=CDS:470223;Parent=Transcript:470223;Name=fgenesh2_kg.1__177__AT1G02650.1 +scaffold_1 JGI_Filtered gene 706878 709509 . - . ID=scaffold_100199.1;Name=scaffold_100199.1 +scaffold_1 JGI_Filtered mRNA 706878 709509 . - . ID=Transcript:918918;Name=Transcript:918918;Parent=scaffold_100199.1 +scaffold_1 JGI_Filtered three_prime_UTR 706878 706899 . - . ID=three_prime_UTR:918918;Parent=Transcript:918918 +scaffold_1 JGI_Filtered exon 706878 707472 . - . ID=exon:918918;Parent=Transcript:918918 +scaffold_1 JGI_Filtered CDS 706900 707472 . - 0 ID=CDS:918918;Parent=Transcript:918918;Name=scaffold_100199.1 +scaffold_1 JGI_Filtered exon 707555 707971 . - . ID=exon:918918;Parent=Transcript:918918 +scaffold_1 JGI_Filtered CDS 707555 707971 . - 0 ID=CDS:918918;Parent=Transcript:918918;Name=scaffold_100199.1 +scaffold_1 JGI_Filtered exon 708054 708113 . - . ID=exon:918918;Parent=Transcript:918918 +scaffold_1 JGI_Filtered CDS 708054 708113 . - 0 ID=CDS:918918;Parent=Transcript:918918;Name=scaffold_100199.1 +scaffold_1 JGI_Filtered exon 708201 708665 . - . ID=exon:918918;Parent=Transcript:918918 +scaffold_1 JGI_Filtered CDS 708201 708665 . - 0 ID=CDS:918918;Parent=Transcript:918918;Name=scaffold_100199.1 +scaffold_1 JGI_Filtered exon 708857 709509 . - . ID=exon:918918;Parent=Transcript:918918 +scaffold_1 JGI_Filtered CDS 708857 709489 . - 0 ID=CDS:918918;Parent=Transcript:918918;Name=scaffold_100199.1 +scaffold_1 JGI_Filtered five_prime_UTR 709490 709509 . - . ID=five_prime_UTR:918918;Parent=Transcript:918918 +scaffold_1 JGI_Filtered gene 712841 713720 . + . ID=scaffold_100200.1;Name=scaffold_100200.1 +scaffold_1 JGI_Filtered mRNA 712841 713720 . + . ID=Transcript:918919;Name=Transcript:918919;Parent=scaffold_100200.1 +scaffold_1 JGI_Filtered five_prime_UTR 712841 712860 . + . ID=five_prime_UTR:918919;Parent=Transcript:918919 +scaffold_1 JGI_Filtered exon 712841 712954 . + . ID=exon:918919;Parent=Transcript:918919 +scaffold_1 JGI_Filtered CDS 712861 712954 . + 0 ID=CDS:918919;Parent=Transcript:918919;Name=scaffold_100200.1 +scaffold_1 JGI_Filtered exon 713054 713091 . + . ID=exon:918919;Parent=Transcript:918919 +scaffold_1 JGI_Filtered CDS 713054 713091 . + 1 ID=CDS:918919;Parent=Transcript:918919;Name=scaffold_100200.1 +scaffold_1 JGI_Filtered exon 713267 713326 . + . ID=exon:918919;Parent=Transcript:918919 +scaffold_1 JGI_Filtered CDS 713267 713326 . + 0 ID=CDS:918919;Parent=Transcript:918919;Name=scaffold_100200.1 +scaffold_1 JGI_Filtered exon 713422 713496 . + . ID=exon:918919;Parent=Transcript:918919 +scaffold_1 JGI_Filtered CDS 713422 713496 . + 0 ID=CDS:918919;Parent=Transcript:918919;Name=scaffold_100200.1 +scaffold_1 JGI_Filtered exon 713593 713720 . + . ID=exon:918919;Parent=Transcript:918919 +scaffold_1 JGI_Filtered CDS 713593 713697 . + 0 ID=CDS:918919;Parent=Transcript:918919;Name=scaffold_100200.1 +scaffold_1 JGI_Filtered three_prime_UTR 713698 713720 . + . ID=three_prime_UTR:918919;Parent=Transcript:918919 +scaffold_1 JGI_Filtered gene 713924 714511 . - . ID=scaffold_100201.1;Name=scaffold_100201.1 +scaffold_1 JGI_Filtered mRNA 713924 714511 . - . ID=Transcript:918920;Name=Transcript:918920;Parent=scaffold_100201.1 +scaffold_1 JGI_Filtered three_prime_UTR 713924 713944 . - . ID=three_prime_UTR:918920;Parent=Transcript:918920 +scaffold_1 JGI_Filtered exon 713924 714511 . - . ID=exon:918920;Parent=Transcript:918920 +scaffold_1 JGI_Filtered CDS 713945 714490 . - 0 ID=CDS:918920;Parent=Transcript:918920;Name=scaffold_100201.1 +scaffold_1 JGI_Filtered five_prime_UTR 714491 714511 . - . ID=five_prime_UTR:918920;Parent=Transcript:918920 +scaffold_1 JGI_Filtered gene 717526 718284 . + . ID=fgenesh2_kg.1__181__AT5G61710.1;Name=fgenesh2_kg.1__181__AT5G61710.1 +scaffold_1 JGI_Filtered mRNA 717526 718284 . + . ID=Transcript:470227;Name=Transcript:470227;Parent=fgenesh2_kg.1__181__AT5G61710.1 +scaffold_1 JGI_Filtered five_prime_UTR 717526 717556 . + . ID=five_prime_UTR:470227;Parent=Transcript:470227 +scaffold_1 JGI_Filtered five_prime_UTR 717567 717614 . + . ID=five_prime_UTR:470227;Parent=Transcript:470227 +scaffold_1 JGI_Filtered five_prime_UTR 717668 717723 . + . ID=five_prime_UTR:470227;Parent=Transcript:470227 +scaffold_1 JGI_Filtered exon 717526 717556 . + . ID=exon:470227;Parent=Transcript:470227 +scaffold_1 JGI_Filtered exon 717567 717614 . + . ID=exon:470227;Parent=Transcript:470227 +scaffold_1 JGI_Filtered exon 717668 717847 . + . ID=exon:470227;Parent=Transcript:470227 +scaffold_1 JGI_Filtered CDS 717724 717847 . + 0 ID=CDS:470227;Parent=Transcript:470227;Name=fgenesh2_kg.1__181__AT5G61710.1 +scaffold_1 JGI_Filtered exon 717935 718284 . + . ID=exon:470227;Parent=Transcript:470227 +scaffold_1 JGI_Filtered CDS 717935 718284 . + 1 ID=CDS:470227;Parent=Transcript:470227;Name=fgenesh2_kg.1__181__AT5G61710.1 +scaffold_1 JGI_Filtered gene 718741 719617 . + . ID=Al_scaffold_0001_183;Name=Al_scaffold_0001_183 +scaffold_1 JGI_Filtered mRNA 718741 719617 . + . ID=Transcript:909929;Name=Transcript:909929;Parent=Al_scaffold_0001_183 +scaffold_1 JGI_Filtered exon 718741 719268 . + . ID=exon:909929;Parent=Transcript:909929 +scaffold_1 JGI_Filtered CDS 718741 719268 . + 0 ID=CDS:909929;Parent=Transcript:909929;Name=Al_scaffold_0001_183 +scaffold_1 JGI_Filtered exon 719492 719617 . + . ID=exon:909929;Parent=Transcript:909929 +scaffold_1 JGI_Filtered CDS 719492 719617 . + 0 ID=CDS:909929;Parent=Transcript:909929;Name=Al_scaffold_0001_183 +scaffold_1 JGI_Filtered gene 720824 722852 . + . ID=scaffold_100205.1;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered mRNA 720824 722852 . + . ID=Transcript:918924;Name=Transcript:918924;Parent=scaffold_100205.1 +scaffold_1 JGI_Filtered five_prime_UTR 720824 720844 . + . ID=five_prime_UTR:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered exon 720824 721066 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 720845 721066 . + 0 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 721301 721397 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 721301 721397 . + 0 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 721495 721586 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 721495 721586 . + 1 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 721682 721813 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 721682 721813 . + 0 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 721924 722109 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 721924 722109 . + 0 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 722205 722368 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 722205 722368 . + 0 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 722450 722528 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 722450 722528 . + 2 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 722606 722734 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 722606 722734 . + 0 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered exon 722797 722852 . + . ID=exon:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered CDS 722797 722829 . + 0 ID=CDS:918924;Parent=Transcript:918924;Name=scaffold_100205.1 +scaffold_1 JGI_Filtered three_prime_UTR 722830 722852 . + . ID=three_prime_UTR:918924;Parent=Transcript:918924 +scaffold_1 JGI_Filtered gene 724801 726076 . + . ID=fgenesh2_kg.1__182__AT1G02700.1;Name=fgenesh2_kg.1__182__AT1G02700.1 +scaffold_1 JGI_Filtered mRNA 724801 726076 . + . ID=Transcript:470228;Name=Transcript:470228;Parent=fgenesh2_kg.1__182__AT1G02700.1 +scaffold_1 JGI_Filtered five_prime_UTR 724801 724815 . + . ID=five_prime_UTR:470228;Parent=Transcript:470228 +scaffold_1 JGI_Filtered exon 724801 724989 . + . ID=exon:470228;Parent=Transcript:470228 +scaffold_1 JGI_Filtered CDS 724816 724989 . + 0 ID=CDS:470228;Parent=Transcript:470228;Name=fgenesh2_kg.1__182__AT1G02700.1 +scaffold_1 JGI_Filtered exon 725249 726076 . + . ID=exon:470228;Parent=Transcript:470228 +scaffold_1 JGI_Filtered CDS 725249 725824 . + 0 ID=CDS:470228;Parent=Transcript:470228;Name=fgenesh2_kg.1__182__AT1G02700.1 +scaffold_1 JGI_Filtered three_prime_UTR 725825 726076 . + . ID=three_prime_UTR:470228;Parent=Transcript:470228 +scaffold_1 JGI_Filtered gene 726305 726601 . - . ID=fgenesh2_kg.1__183__AT1G02710.1;Name=fgenesh2_kg.1__183__AT1G02710.1 +scaffold_1 JGI_Filtered mRNA 726305 726601 . - . ID=Transcript:470229;Name=Transcript:470229;Parent=fgenesh2_kg.1__183__AT1G02710.1 +scaffold_1 JGI_Filtered exon 726305 726456 . - . ID=exon:470229;Parent=Transcript:470229 +scaffold_1 JGI_Filtered CDS 726305 726456 . - 0 ID=CDS:470229;Parent=Transcript:470229;Name=fgenesh2_kg.1__183__AT1G02710.1 +scaffold_1 JGI_Filtered exon 726493 726601 . - . ID=exon:470229;Parent=Transcript:470229 +scaffold_1 JGI_Filtered CDS 726493 726601 . - 2 ID=CDS:470229;Parent=Transcript:470229;Name=fgenesh2_kg.1__183__AT1G02710.1 +scaffold_1 JGI_Filtered gene 728324 730532 . + . ID=fgenesh2_kg.1__185__AT1G02720.1;Name=fgenesh2_kg.1__185__AT1G02720.1 +scaffold_1 JGI_Filtered mRNA 728324 730532 . + . ID=Transcript:470231;Name=Transcript:470231;Parent=fgenesh2_kg.1__185__AT1G02720.1 +scaffold_1 JGI_Filtered five_prime_UTR 728324 728494 . + . ID=five_prime_UTR:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered exon 728324 729610 . + . ID=exon:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered CDS 728495 729580 . + 0 ID=CDS:470231;Parent=Transcript:470231;Name=fgenesh2_kg.1__185__AT1G02720.1 +scaffold_1 JGI_Filtered exon 730336 730357 . + . ID=exon:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered exon 730432 730460 . + . ID=exon:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered exon 730488 730532 . + . ID=exon:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered three_prime_UTR 729581 729610 . + . ID=three_prime_UTR:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered three_prime_UTR 730336 730357 . + . ID=three_prime_UTR:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered three_prime_UTR 730432 730460 . + . ID=three_prime_UTR:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered three_prime_UTR 730488 730532 . + . ID=three_prime_UTR:470231;Parent=Transcript:470231 +scaffold_1 JGI_Filtered gene 730979 731207 . - . ID=scaffold_100208.1;Name=scaffold_100208.1 +scaffold_1 JGI_Filtered mRNA 730979 731207 . - . ID=Transcript:918927;Name=Transcript:918927;Parent=scaffold_100208.1 +scaffold_1 JGI_Filtered three_prime_UTR 730979 730998 . - . ID=three_prime_UTR:918927;Parent=Transcript:918927 +scaffold_1 JGI_Filtered exon 730979 731207 . - . ID=exon:918927;Parent=Transcript:918927 +scaffold_1 JGI_Filtered CDS 730999 731187 . - 0 ID=CDS:918927;Parent=Transcript:918927;Name=scaffold_100208.1 +scaffold_1 JGI_Filtered five_prime_UTR 731188 731207 . - . ID=five_prime_UTR:918927;Parent=Transcript:918927 +scaffold_1 JGI_Filtered gene 731564 731809 . - . ID=scaffold_100209.1;Name=scaffold_100209.1 +scaffold_1 JGI_Filtered mRNA 731564 731809 . - . ID=Transcript:918928;Name=Transcript:918928;Parent=scaffold_100209.1 +scaffold_1 JGI_Filtered three_prime_UTR 731564 731583 . - . ID=three_prime_UTR:918928;Parent=Transcript:918928 +scaffold_1 JGI_Filtered exon 731564 731809 . - . ID=exon:918928;Parent=Transcript:918928 +scaffold_1 JGI_Filtered CDS 731584 731787 . - 0 ID=CDS:918928;Parent=Transcript:918928;Name=scaffold_100209.1 +scaffold_1 JGI_Filtered five_prime_UTR 731788 731809 . - . ID=five_prime_UTR:918928;Parent=Transcript:918928 +scaffold_1 JGI_Filtered gene 733323 737232 . - . ID=scaffold_100210.1;Name=scaffold_100210.1 +scaffold_1 JGI_Filtered mRNA 733323 737232 . - . ID=Transcript:918929;Name=Transcript:918929;Parent=scaffold_100210.1 +scaffold_1 JGI_Filtered three_prime_UTR 733323 733421 . - . ID=three_prime_UTR:918929;Parent=Transcript:918929 +scaffold_1 JGI_Filtered exon 733323 735203 . - . ID=exon:918929;Parent=Transcript:918929 +scaffold_1 JGI_Filtered CDS 733422 735203 . - 0 ID=CDS:918929;Parent=Transcript:918929;Name=scaffold_100210.1 +scaffold_1 JGI_Filtered exon 735297 736107 . - . ID=exon:918929;Parent=Transcript:918929 +scaffold_1 JGI_Filtered CDS 735297 736107 . - 0 ID=CDS:918929;Parent=Transcript:918929;Name=scaffold_100210.1 +scaffold_1 JGI_Filtered exon 736251 737232 . - . ID=exon:918929;Parent=Transcript:918929 +scaffold_1 JGI_Filtered CDS 736251 737212 . - 1 ID=CDS:918929;Parent=Transcript:918929;Name=scaffold_100210.1 +scaffold_1 JGI_Filtered five_prime_UTR 737213 737232 . - . ID=five_prime_UTR:918929;Parent=Transcript:918929 +scaffold_1 JGI_Filtered gene 738034 740477 . - . ID=fgenesh2_kg.1__187__AT1G02740.1;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered mRNA 738034 740477 . - . ID=Transcript:470233;Name=Transcript:470233;Parent=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered three_prime_UTR 738034 738083 . - . ID=three_prime_UTR:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered three_prime_UTR 738096 738111 . - . ID=three_prime_UTR:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered three_prime_UTR 738122 738174 . - . ID=three_prime_UTR:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered three_prime_UTR 738186 738265 . - . ID=three_prime_UTR:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered exon 738034 738083 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered exon 738096 738111 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered exon 738122 738174 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered exon 738186 738265 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered exon 738351 738435 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 738351 738435 . - 1 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered CDS 738351 738265 . - 0 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 738560 738731 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 738560 738731 . - 2 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 738939 739016 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 738939 739016 . - 0 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 739097 739201 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 739097 739201 . - 0 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 739312 739352 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 739312 739352 . - 0 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 739662 739807 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 739662 739807 . - 2 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 739985 739998 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 739985 739998 . - 1 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 740103 740156 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 740103 740156 . - 0 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered exon 740260 740477 . - . ID=exon:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered CDS 740260 740469 . - 0 ID=CDS:470233;Parent=Transcript:470233;Name=fgenesh2_kg.1__187__AT1G02740.1 +scaffold_1 JGI_Filtered five_prime_UTR 740470 740477 . - . ID=five_prime_UTR:470233;Parent=Transcript:470233 +scaffold_1 JGI_Filtered gene 740944 742742 . + . ID=fgenesh2_kg.1__188__AT1G02750.1;Name=fgenesh2_kg.1__188__AT1G02750.1 +scaffold_1 JGI_Filtered mRNA 740944 742742 . + . ID=Transcript:470234;Name=Transcript:470234;Parent=fgenesh2_kg.1__188__AT1G02750.1 +scaffold_1 JGI_Filtered five_prime_UTR 740944 741064 . + . ID=five_prime_UTR:470234;Parent=Transcript:470234 +scaffold_1 JGI_Filtered exon 740944 741146 . + . ID=exon:470234;Parent=Transcript:470234 +scaffold_1 JGI_Filtered CDS 741065 741146 . + 0 ID=CDS:470234;Parent=Transcript:470234;Name=fgenesh2_kg.1__188__AT1G02750.1 +scaffold_1 JGI_Filtered exon 741353 741495 . + . ID=exon:470234;Parent=Transcript:470234 +scaffold_1 JGI_Filtered CDS 741353 741495 . + 1 ID=CDS:470234;Parent=Transcript:470234;Name=fgenesh2_kg.1__188__AT1G02750.1 +scaffold_1 JGI_Filtered exon 742047 742115 . + . ID=exon:470234;Parent=Transcript:470234 +scaffold_1 JGI_Filtered CDS 742047 742115 . + 0 ID=CDS:470234;Parent=Transcript:470234;Name=fgenesh2_kg.1__188__AT1G02750.1 +scaffold_1 JGI_Filtered exon 742229 742579 . + . ID=exon:470234;Parent=Transcript:470234 +scaffold_1 JGI_Filtered CDS 742229 742579 . + 0 ID=CDS:470234;Parent=Transcript:470234;Name=fgenesh2_kg.1__188__AT1G02750.1 +scaffold_1 JGI_Filtered exon 742590 742742 . + . ID=exon:470234;Parent=Transcript:470234 +scaffold_1 JGI_Filtered three_prime_UTR 742590 742742 . + . ID=three_prime_UTR:470234;Parent=Transcript:470234 +scaffold_1 JGI_Filtered gene 744394 745999 . - . ID=fgenesh2_kg.1__189__AT1G02780.1;Name=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered mRNA 744394 745999 . - . ID=Transcript:470235;Name=Transcript:470235;Parent=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered three_prime_UTR 744394 744640 . - . ID=three_prime_UTR:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered exon 744394 744665 . - . ID=exon:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered CDS 744641 744665 . - 0 ID=CDS:470235;Parent=Transcript:470235;Name=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered exon 744738 744740 . - . ID=exon:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered CDS 744738 744740 . - 1 ID=CDS:470235;Parent=Transcript:470235;Name=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered exon 744752 744819 . - . ID=exon:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered CDS 744752 744819 . - 1 ID=CDS:470235;Parent=Transcript:470235;Name=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered exon 744906 745219 . - . ID=exon:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered CDS 744906 745219 . - 0 ID=CDS:470235;Parent=Transcript:470235;Name=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered exon 745321 745443 . - . ID=exon:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered CDS 745321 745443 . - 2 ID=CDS:470235;Parent=Transcript:470235;Name=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered exon 745814 745999 . - . ID=exon:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered CDS 745814 745925 . - 2 ID=CDS:470235;Parent=Transcript:470235;Name=fgenesh2_kg.1__189__AT1G02780.1 +scaffold_1 JGI_Filtered five_prime_UTR 745926 745999 . - . ID=five_prime_UTR:470235;Parent=Transcript:470235 +scaffold_1 JGI_Filtered gene 747054 748712 . - . ID=scaffold_100214.1;Name=scaffold_100214.1 +scaffold_1 JGI_Filtered mRNA 747054 748712 . - . ID=Transcript:918933;Name=Transcript:918933;Parent=scaffold_100214.1 +scaffold_1 JGI_Filtered three_prime_UTR 747054 747075 . - . ID=three_prime_UTR:918933;Parent=Transcript:918933 +scaffold_1 JGI_Filtered exon 747054 747330 . - . ID=exon:918933;Parent=Transcript:918933 +scaffold_1 JGI_Filtered CDS 747076 747330 . - 0 ID=CDS:918933;Parent=Transcript:918933;Name=scaffold_100214.1 +scaffold_1 JGI_Filtered exon 747424 747927 . - . ID=exon:918933;Parent=Transcript:918933 +scaffold_1 JGI_Filtered CDS 747424 747927 . - 0 ID=CDS:918933;Parent=Transcript:918933;Name=scaffold_100214.1 +scaffold_1 JGI_Filtered exon 748040 748342 . - . ID=exon:918933;Parent=Transcript:918933 +scaffold_1 JGI_Filtered CDS 748040 748342 . - 0 ID=CDS:918933;Parent=Transcript:918933;Name=scaffold_100214.1 +scaffold_1 JGI_Filtered exon 748441 748712 . - . ID=exon:918933;Parent=Transcript:918933 +scaffold_1 JGI_Filtered CDS 748441 748647 . - 0 ID=CDS:918933;Parent=Transcript:918933;Name=scaffold_100214.1 +scaffold_1 JGI_Filtered five_prime_UTR 748648 748712 . - . ID=five_prime_UTR:918933;Parent=Transcript:918933 +scaffold_1 JGI_Filtered gene 750076 752884 . - . ID=scaffold_100215.1;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered mRNA 750076 752884 . - . ID=Transcript:918934;Name=Transcript:918934;Parent=scaffold_100215.1 +scaffold_1 JGI_Filtered three_prime_UTR 750076 750095 . - . ID=three_prime_UTR:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered exon 750076 750416 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 750096 750416 . - 0 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered exon 750811 750974 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 750811 750974 . - 0 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered exon 751101 751206 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 751101 751206 . - 2 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered exon 751289 751450 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 751289 751450 . - 0 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered exon 751552 751644 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 751552 751644 . - 0 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered exon 751829 752029 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 751829 752029 . - 0 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered exon 752113 752319 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 752113 752319 . - 0 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered exon 752612 752884 . - . ID=exon:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered CDS 752612 752863 . - 0 ID=CDS:918934;Parent=Transcript:918934;Name=scaffold_100215.1 +scaffold_1 JGI_Filtered five_prime_UTR 752864 752884 . - . ID=five_prime_UTR:918934;Parent=Transcript:918934 +scaffold_1 JGI_Filtered gene 756485 758576 . + . ID=fgenesh1_pg.C_scaffold_1000172;Name=fgenesh1_pg.C_scaffold_1000172 +scaffold_1 JGI_Filtered mRNA 756485 758576 . + . ID=Transcript:333607;Name=Transcript:333607;Parent=fgenesh1_pg.C_scaffold_1000172 +scaffold_1 JGI_Filtered exon 756485 757529 . + . ID=exon:333607;Parent=Transcript:333607 +scaffold_1 JGI_Filtered CDS 756485 757529 . + 0 ID=CDS:333607;Parent=Transcript:333607;Name=fgenesh1_pg.C_scaffold_1000172 +scaffold_1 JGI_Filtered exon 757823 757894 . + . ID=exon:333607;Parent=Transcript:333607 +scaffold_1 JGI_Filtered CDS 757823 757894 . + 1 ID=CDS:333607;Parent=Transcript:333607;Name=fgenesh1_pg.C_scaffold_1000172 +scaffold_1 JGI_Filtered exon 758107 758576 . + . ID=exon:333607;Parent=Transcript:333607 +scaffold_1 JGI_Filtered CDS 758107 758576 . + 1 ID=CDS:333607;Parent=Transcript:333607;Name=fgenesh1_pg.C_scaffold_1000172 +scaffold_1 JGI_Filtered gene 759019 759536 . + . ID=fgenesh2_kg.1__193__AT1G02813.1;Name=fgenesh2_kg.1__193__AT1G02813.1 +scaffold_1 JGI_Filtered mRNA 759019 759536 . + . ID=Transcript:470239;Name=Transcript:470239;Parent=fgenesh2_kg.1__193__AT1G02813.1 +scaffold_1 JGI_Filtered five_prime_UTR 759019 759019 . + . ID=five_prime_UTR:470239;Parent=Transcript:470239 +scaffold_1 JGI_Filtered exon 759019 759536 . + . ID=exon:470239;Parent=Transcript:470239 +scaffold_1 JGI_Filtered CDS 759020 759469 . + 0 ID=CDS:470239;Parent=Transcript:470239;Name=fgenesh2_kg.1__193__AT1G02813.1 +scaffold_1 JGI_Filtered three_prime_UTR 759470 759536 . + . ID=three_prime_UTR:470239;Parent=Transcript:470239 +scaffold_1 JGI_Filtered gene 759661 760663 . + . ID=fgenesh2_kg.1__194__AT1G02816.1;Name=fgenesh2_kg.1__194__AT1G02816.1 +scaffold_1 JGI_Filtered mRNA 759661 760663 . + . ID=Transcript:470240;Name=Transcript:470240;Parent=fgenesh2_kg.1__194__AT1G02816.1 +scaffold_1 JGI_Filtered five_prime_UTR 759661 759801 . + . ID=five_prime_UTR:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered five_prime_UTR 759818 759818 . + . ID=five_prime_UTR:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered exon 759661 759801 . + . ID=exon:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered exon 759818 759865 . + . ID=exon:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered CDS 759819 759865 . + 0 ID=CDS:470240;Parent=Transcript:470240;Name=fgenesh2_kg.1__194__AT1G02816.1 +scaffold_1 JGI_Filtered exon 759884 760414 . + . ID=exon:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered CDS 759884 760337 . + 2 ID=CDS:470240;Parent=Transcript:470240;Name=fgenesh2_kg.1__194__AT1G02816.1 +scaffold_1 JGI_Filtered exon 760429 760531 . + . ID=exon:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered exon 760557 760571 . + . ID=exon:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered exon 760595 760663 . + . ID=exon:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered three_prime_UTR 760338 760414 . + . ID=three_prime_UTR:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered three_prime_UTR 760429 760531 . + . ID=three_prime_UTR:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered three_prime_UTR 760557 760571 . + . ID=three_prime_UTR:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered three_prime_UTR 760595 760663 . + . ID=three_prime_UTR:470240;Parent=Transcript:470240 +scaffold_1 JGI_Filtered gene 762378 762803 . - . ID=scaffold_100219.1;Name=scaffold_100219.1 +scaffold_1 JGI_Filtered mRNA 762378 762803 . - . ID=Transcript:918938;Name=Transcript:918938;Parent=scaffold_100219.1 +scaffold_1 JGI_Filtered three_prime_UTR 762378 762397 . - . ID=three_prime_UTR:918938;Parent=Transcript:918938 +scaffold_1 JGI_Filtered exon 762378 762617 . - . ID=exon:918938;Parent=Transcript:918938 +scaffold_1 JGI_Filtered CDS 762398 762617 . - 0 ID=CDS:918938;Parent=Transcript:918938;Name=scaffold_100219.1 +scaffold_1 JGI_Filtered exon 762710 762803 . - . ID=exon:918938;Parent=Transcript:918938 +scaffold_1 JGI_Filtered CDS 762710 762783 . - 1 ID=CDS:918938;Parent=Transcript:918938;Name=scaffold_100219.1 +scaffold_1 JGI_Filtered five_prime_UTR 762784 762803 . - . ID=five_prime_UTR:918938;Parent=Transcript:918938 +scaffold_1 JGI_Filtered gene 763612 764069 . - . ID=fgenesh2_kg.1__195__AT1G02830.1;Name=fgenesh2_kg.1__195__AT1G02830.1 +scaffold_1 JGI_Filtered mRNA 763612 764069 . - . ID=Transcript:470241;Name=Transcript:470241;Parent=fgenesh2_kg.1__195__AT1G02830.1 +scaffold_1 JGI_Filtered exon 763612 763711 . - . ID=exon:470241;Parent=Transcript:470241 +scaffold_1 JGI_Filtered CDS 763612 763711 . - 0 ID=CDS:470241;Parent=Transcript:470241;Name=fgenesh2_kg.1__195__AT1G02830.1 +scaffold_1 JGI_Filtered exon 763834 764069 . - . ID=exon:470241;Parent=Transcript:470241 +scaffold_1 JGI_Filtered CDS 763834 764069 . - 1 ID=CDS:470241;Parent=Transcript:470241;Name=fgenesh2_kg.1__195__AT1G02830.1 +scaffold_1 JGI_Filtered gene 765430 766468 . - . ID=scaffold_100221.1;Name=scaffold_100221.1 +scaffold_1 JGI_Filtered mRNA 765430 766468 . - . ID=Transcript:918940;Name=Transcript:918940;Parent=scaffold_100221.1 +scaffold_1 JGI_Filtered three_prime_UTR 765430 765449 . - . ID=three_prime_UTR:918940;Parent=Transcript:918940 +scaffold_1 JGI_Filtered exon 765430 765958 . - . ID=exon:918940;Parent=Transcript:918940 +scaffold_1 JGI_Filtered CDS 765450 765958 . - 0 ID=CDS:918940;Parent=Transcript:918940;Name=scaffold_100221.1 +scaffold_1 JGI_Filtered exon 766373 766468 . - . ID=exon:918940;Parent=Transcript:918940 +scaffold_1 JGI_Filtered CDS 766373 766448 . - 2 ID=CDS:918940;Parent=Transcript:918940;Name=scaffold_100221.1 +scaffold_1 JGI_Filtered five_prime_UTR 766449 766468 . - . ID=five_prime_UTR:918940;Parent=Transcript:918940 +scaffold_1 JGI_Filtered gene 766738 768326 . - . ID=scaffold_100222.1;Name=scaffold_100222.1 +scaffold_1 JGI_Filtered mRNA 766738 768326 . - . ID=Transcript:918941;Name=Transcript:918941;Parent=scaffold_100222.1 +scaffold_1 JGI_Filtered three_prime_UTR 766738 766757 . - . ID=three_prime_UTR:918941;Parent=Transcript:918941 +scaffold_1 JGI_Filtered exon 766738 766948 . - . ID=exon:918941;Parent=Transcript:918941 +scaffold_1 JGI_Filtered CDS 766758 766948 . - 0 ID=CDS:918941;Parent=Transcript:918941;Name=scaffold_100222.1 +scaffold_1 JGI_Filtered exon 767316 767888 . - . ID=exon:918941;Parent=Transcript:918941 +scaffold_1 JGI_Filtered CDS 767316 767888 . - 2 ID=CDS:918941;Parent=Transcript:918941;Name=scaffold_100222.1 +scaffold_1 JGI_Filtered exon 768254 768326 . - . ID=exon:918941;Parent=Transcript:918941 +scaffold_1 JGI_Filtered CDS 768254 768305 . - 2 ID=CDS:918941;Parent=Transcript:918941;Name=scaffold_100222.1 +scaffold_1 JGI_Filtered five_prime_UTR 768306 768326 . - . ID=five_prime_UTR:918941;Parent=Transcript:918941 +scaffold_1 JGI_Filtered gene 768374 770507 . + . ID=fgenesh1_pm.C_scaffold_1000165;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered mRNA 768374 770507 . + . ID=Transcript:311385;Name=Transcript:311385;Parent=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 768374 768460 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 768374 768460 . + 0 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 768561 768626 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 768561 768626 . + 0 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 768775 768849 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 768775 768849 . + 0 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 768936 769080 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 768936 769080 . + 0 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 769165 769211 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 769165 769211 . + 1 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 769298 769355 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 769298 769355 . + 0 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 769429 769478 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 769429 769478 . + 1 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 769571 769627 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 769571 769627 . + 0 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 769710 769957 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 769710 769957 . + 0 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered exon 770447 770507 . + . ID=exon:311385;Parent=Transcript:311385 +scaffold_1 JGI_Filtered CDS 770447 770507 . + 2 ID=CDS:311385;Parent=Transcript:311385;Name=fgenesh1_pm.C_scaffold_1000165 +scaffold_1 JGI_Filtered gene 771817 774951 . + . ID=Al_scaffold_0001_200;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered mRNA 771817 774951 . + . ID=Transcript:909946;Name=Transcript:909946;Parent=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 771817 771924 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 771817 771924 . + 0 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 772048 772245 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 772048 772245 . + 0 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 772352 772427 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 772352 772427 . + 0 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 772499 772570 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 772499 772570 . + 1 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 772672 772759 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 772672 772759 . + 1 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 772842 773097 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 772842 773097 . + 2 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 773167 773282 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 773167 773282 . + 0 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 773365 773585 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 773365 773585 . + 2 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 773946 773964 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 773946 773964 . + 1 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 774549 774620 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 774549 774620 . + 2 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered exon 774696 774951 . + . ID=exon:909946;Parent=Transcript:909946 +scaffold_1 JGI_Filtered CDS 774696 774951 . + 2 ID=CDS:909946;Parent=Transcript:909946;Name=Al_scaffold_0001_200 +scaffold_1 JGI_Filtered gene 777262 779272 . + . ID=fgenesh2_kg.1__205__AT1G02860.1;Name=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered mRNA 777262 779272 . + . ID=Transcript:470251;Name=Transcript:470251;Parent=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered five_prime_UTR 777262 777315 . + . ID=five_prime_UTR:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered five_prime_UTR 777327 777421 . + . ID=five_prime_UTR:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered five_prime_UTR 777444 777450 . + . ID=five_prime_UTR:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered exon 777262 777315 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered exon 777327 777421 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered exon 777444 777628 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered CDS 777451 777628 . + 0 ID=CDS:470251;Parent=Transcript:470251;Name=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered exon 777734 777981 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered CDS 777734 777981 . + 1 ID=CDS:470251;Parent=Transcript:470251;Name=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered exon 778074 778349 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered CDS 778074 778349 . + 0 ID=CDS:470251;Parent=Transcript:470251;Name=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered exon 778606 778743 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered CDS 778606 778743 . + 0 ID=CDS:470251;Parent=Transcript:470251;Name=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered exon 778832 778890 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered CDS 778832 778890 . + 0 ID=CDS:470251;Parent=Transcript:470251;Name=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered exon 778994 779272 . + . ID=exon:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered CDS 778994 779099 . + 2 ID=CDS:470251;Parent=Transcript:470251;Name=fgenesh2_kg.1__205__AT1G02860.1 +scaffold_1 JGI_Filtered three_prime_UTR 779100 779272 . + . ID=three_prime_UTR:470251;Parent=Transcript:470251 +scaffold_1 JGI_Filtered gene 779234 780531 . - . ID=fgenesh2_kg.1__206__AT1G02870.1;Name=fgenesh2_kg.1__206__AT1G02870.1 +scaffold_1 JGI_Filtered mRNA 779234 780531 . - . ID=Transcript:470252;Name=Transcript:470252;Parent=fgenesh2_kg.1__206__AT1G02870.1 +scaffold_1 JGI_Filtered three_prime_UTR 779234 779272 . - . ID=three_prime_UTR:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered three_prime_UTR 779302 779383 . - . ID=three_prime_UTR:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered exon 779234 779272 . - . ID=exon:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered exon 779302 779497 . - . ID=exon:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered CDS 779384 779497 . - 0 ID=CDS:470252;Parent=Transcript:470252;Name=fgenesh2_kg.1__206__AT1G02870.1 +scaffold_1 JGI_Filtered exon 779579 779700 . - . ID=exon:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered CDS 779579 779700 . - 0 ID=CDS:470252;Parent=Transcript:470252;Name=fgenesh2_kg.1__206__AT1G02870.1 +scaffold_1 JGI_Filtered exon 780094 780441 . - . ID=exon:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered CDS 780094 780439 . - 2 ID=CDS:470252;Parent=Transcript:470252;Name=fgenesh2_kg.1__206__AT1G02870.1 +scaffold_1 JGI_Filtered exon 780460 780531 . - . ID=exon:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered five_prime_UTR 780440 780441 . - . ID=five_prime_UTR:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered five_prime_UTR 780460 780531 . - . ID=five_prime_UTR:470252;Parent=Transcript:470252 +scaffold_1 JGI_Filtered gene 781148 782414 . - . ID=Al_scaffold_0001_203;Name=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered mRNA 781148 782414 . - . ID=Transcript:909949;Name=Transcript:909949;Parent=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered exon 781148 781254 . - . ID=exon:909949;Parent=Transcript:909949 +scaffold_1 JGI_Filtered CDS 781148 781254 . - 0 ID=CDS:909949;Parent=Transcript:909949;Name=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered exon 781391 781550 . - . ID=exon:909949;Parent=Transcript:909949 +scaffold_1 JGI_Filtered CDS 781391 781550 . - 2 ID=CDS:909949;Parent=Transcript:909949;Name=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered exon 781641 781696 . - . ID=exon:909949;Parent=Transcript:909949 +scaffold_1 JGI_Filtered CDS 781641 781696 . - 0 ID=CDS:909949;Parent=Transcript:909949;Name=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered exon 781808 781964 . - . ID=exon:909949;Parent=Transcript:909949 +scaffold_1 JGI_Filtered CDS 781808 781964 . - 2 ID=CDS:909949;Parent=Transcript:909949;Name=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered exon 782060 782246 . - . ID=exon:909949;Parent=Transcript:909949 +scaffold_1 JGI_Filtered CDS 782060 782246 . - 0 ID=CDS:909949;Parent=Transcript:909949;Name=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered exon 782395 782414 . - . ID=exon:909949;Parent=Transcript:909949 +scaffold_1 JGI_Filtered CDS 782395 782414 . - 1 ID=CDS:909949;Parent=Transcript:909949;Name=Al_scaffold_0001_203 +scaffold_1 JGI_Filtered gene 784225 786151 . - . ID=fgenesh2_kg.1__210__AT1G02880.2;Name=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered mRNA 784225 786151 . - . ID=Transcript:470256;Name=Transcript:470256;Parent=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered three_prime_UTR 784225 784327 . - . ID=three_prime_UTR:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered three_prime_UTR 784352 784497 . - . ID=three_prime_UTR:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered three_prime_UTR 784511 784524 . - . ID=three_prime_UTR:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered exon 784225 784327 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered exon 784352 784497 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered exon 784511 784670 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered CDS 784525 784670 . - 0 ID=CDS:470256;Parent=Transcript:470256;Name=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered exon 784771 785020 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered CDS 784771 785020 . - 2 ID=CDS:470256;Parent=Transcript:470256;Name=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered exon 785108 785209 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered CDS 785108 785209 . - 0 ID=CDS:470256;Parent=Transcript:470256;Name=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered exon 785300 785372 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered CDS 785300 785372 . - 0 ID=CDS:470256;Parent=Transcript:470256;Name=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered exon 785641 785737 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered CDS 785641 785737 . - 1 ID=CDS:470256;Parent=Transcript:470256;Name=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered exon 785841 785975 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered CDS 785841 785973 . - 2 ID=CDS:470256;Parent=Transcript:470256;Name=fgenesh2_kg.1__210__AT1G02880.2 +scaffold_1 JGI_Filtered exon 786089 786151 . - . ID=exon:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered five_prime_UTR 785974 785975 . - . ID=five_prime_UTR:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered five_prime_UTR 786089 786151 . - . ID=five_prime_UTR:470256;Parent=Transcript:470256 +scaffold_1 JGI_Filtered gene 786367 786721 . + . ID=scaffold_100229.1;Name=scaffold_100229.1 +scaffold_1 JGI_Filtered mRNA 786367 786721 . + . ID=Transcript:918948;Name=Transcript:918948;Parent=scaffold_100229.1 +scaffold_1 JGI_Filtered five_prime_UTR 786367 786386 . + . ID=five_prime_UTR:918948;Parent=Transcript:918948 +scaffold_1 JGI_Filtered exon 786367 786721 . + . ID=exon:918948;Parent=Transcript:918948 +scaffold_1 JGI_Filtered CDS 786387 786701 . + 0 ID=CDS:918948;Parent=Transcript:918948;Name=scaffold_100229.1 +scaffold_1 JGI_Filtered three_prime_UTR 786702 786721 . + . ID=three_prime_UTR:918948;Parent=Transcript:918948 +scaffold_1 JGI_Filtered gene 787193 787397 . + . ID=scaffold_100230.1;Name=scaffold_100230.1 +scaffold_1 JGI_Filtered mRNA 787193 787397 . + . ID=Transcript:918949;Name=Transcript:918949;Parent=scaffold_100230.1 +scaffold_1 JGI_Filtered five_prime_UTR 787193 787212 . + . ID=five_prime_UTR:918949;Parent=Transcript:918949 +scaffold_1 JGI_Filtered exon 787193 787397 . + . ID=exon:918949;Parent=Transcript:918949 +scaffold_1 JGI_Filtered CDS 787213 787377 . + 0 ID=CDS:918949;Parent=Transcript:918949;Name=scaffold_100230.1 +scaffold_1 JGI_Filtered three_prime_UTR 787378 787397 . + . ID=three_prime_UTR:918949;Parent=Transcript:918949 +scaffold_1 JGI_Filtered gene 789508 796443 . - . ID=fgenesh2_kg.1__213__AT1G02890.1;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered mRNA 789508 796443 . - . ID=Transcript:470259;Name=Transcript:470259;Parent=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered three_prime_UTR 789508 789545 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 789601 789881 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 789966 790070 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 790153 790212 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 790296 790434 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 790511 790695 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 790814 790897 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 790976 791098 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 791189 791368 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 791450 791519 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 791613 791709 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 791796 791871 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 791969 792058 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 792140 792244 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 792401 792472 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 792579 792752 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 792840 792910 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered three_prime_UTR 793001 793134 . - . ID=three_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered exon 789508 789545 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered exon 789601 789881 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered exon 789966 790070 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 789966 790070 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 790153 790212 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 790153 790212 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 790296 790434 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 790296 790434 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 790511 790695 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 790511 790695 . - 1 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 790814 790897 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 790814 790897 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 790976 791098 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 790976 791098 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 791189 791368 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 791189 791368 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 791450 791519 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 791450 791519 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 791613 791709 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 791613 791709 . - 1 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 791796 791871 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 791796 791871 . - 2 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 791969 792058 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 791969 792058 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 792140 792244 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 792140 792244 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 792401 792472 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 792401 792472 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 792579 792752 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 792579 792752 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 792840 792910 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 792840 792910 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 793001 793134 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 793001 793134 . - 2 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 793245 793317 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 793245 793317 . - 1 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered CDS 793245 789881 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 793412 793640 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 793412 793640 . - 2 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 793857 793948 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 793857 793948 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 794042 794166 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 794042 794166 . - 2 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 794286 794944 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 794286 794944 . - 1 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 795088 795234 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 795088 795234 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 795313 795426 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 795313 795426 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 795758 795849 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 795758 795849 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 795927 796146 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 795927 796146 . - 2 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered exon 796310 796443 . - . ID=exon:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered CDS 796310 796396 . - 0 ID=CDS:470259;Parent=Transcript:470259;Name=fgenesh2_kg.1__213__AT1G02890.1 +scaffold_1 JGI_Filtered five_prime_UTR 796397 796443 . - . ID=five_prime_UTR:470259;Parent=Transcript:470259 +scaffold_1 JGI_Filtered gene 798586 799140 . - . ID=fgenesh2_kg.1__215__AT1G02900.1;Name=fgenesh2_kg.1__215__AT1G02900.1 +scaffold_1 JGI_Filtered mRNA 798586 799140 . - . ID=Transcript:470261;Name=Transcript:470261;Parent=fgenesh2_kg.1__215__AT1G02900.1 +scaffold_1 JGI_Filtered three_prime_UTR 798586 798780 . - . ID=three_prime_UTR:470261;Parent=Transcript:470261 +scaffold_1 JGI_Filtered exon 798586 799140 . - . ID=exon:470261;Parent=Transcript:470261 +scaffold_1 JGI_Filtered CDS 798781 799137 . - 0 ID=CDS:470261;Parent=Transcript:470261;Name=fgenesh2_kg.1__215__AT1G02900.1 +scaffold_1 JGI_Filtered five_prime_UTR 799138 799140 . - . ID=five_prime_UTR:470261;Parent=Transcript:470261 +scaffold_1 JGI_Filtered gene 800563 803042 . - . ID=scaffold_100233.1;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered mRNA 800563 803042 . - . ID=Transcript:918952;Name=Transcript:918952;Parent=scaffold_100233.1 +scaffold_1 JGI_Filtered three_prime_UTR 800563 800582 . - . ID=three_prime_UTR:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered exon 800563 800657 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 800583 800657 . - 0 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 800798 800894 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 800798 800894 . - 0 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 800996 801096 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 800996 801096 . - 1 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 801186 801374 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 801186 801374 . - 0 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 801457 801614 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 801457 801614 . - 0 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 801697 801928 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 801697 801928 . - 2 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 802012 802147 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 802012 802147 . - 0 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 802264 802367 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 802264 802367 . - 1 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered exon 802752 803042 . - . ID=exon:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered CDS 802752 803021 . - 0 ID=CDS:918952;Parent=Transcript:918952;Name=scaffold_100233.1 +scaffold_1 JGI_Filtered five_prime_UTR 803022 803042 . - . ID=five_prime_UTR:918952;Parent=Transcript:918952 +scaffold_1 JGI_Filtered gene 803529 804614 . - . ID=fgenesh2_kg.1__217__AT1G02920.1;Name=fgenesh2_kg.1__217__AT1G02920.1 +scaffold_1 JGI_Filtered mRNA 803529 804614 . - . ID=Transcript:470263;Name=Transcript:470263;Parent=fgenesh2_kg.1__217__AT1G02920.1 +scaffold_1 JGI_Filtered three_prime_UTR 803529 803560 . - . ID=three_prime_UTR:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered three_prime_UTR 803578 803641 . - . ID=three_prime_UTR:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered three_prime_UTR 803663 803757 . - . ID=three_prime_UTR:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered exon 803529 803560 . - . ID=exon:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered exon 803578 803641 . - . ID=exon:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered exon 803663 804188 . - . ID=exon:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered CDS 803758 804188 . - 0 ID=CDS:470263;Parent=Transcript:470263;Name=fgenesh2_kg.1__217__AT1G02920.1 +scaffold_1 JGI_Filtered exon 804317 804365 . - . ID=exon:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered CDS 804317 804365 . - 2 ID=CDS:470263;Parent=Transcript:470263;Name=fgenesh2_kg.1__217__AT1G02920.1 +scaffold_1 JGI_Filtered exon 804455 804614 . - . ID=exon:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered CDS 804455 804604 . - 0 ID=CDS:470263;Parent=Transcript:470263;Name=fgenesh2_kg.1__217__AT1G02920.1 +scaffold_1 JGI_Filtered five_prime_UTR 804605 804614 . - . ID=five_prime_UTR:470263;Parent=Transcript:470263 +scaffold_1 JGI_Filtered gene 806284 807466 . - . ID=fgenesh2_kg.1__218__AT1G02930.1;Name=fgenesh2_kg.1__218__AT1G02930.1 +scaffold_1 JGI_Filtered mRNA 806284 807466 . - . ID=Transcript:470264;Name=Transcript:470264;Parent=fgenesh2_kg.1__218__AT1G02930.1 +scaffold_1 JGI_Filtered three_prime_UTR 806284 806340 . - . ID=three_prime_UTR:470264;Parent=Transcript:470264 +scaffold_1 JGI_Filtered three_prime_UTR 806368 806401 . - . ID=three_prime_UTR:470264;Parent=Transcript:470264 +scaffold_1 JGI_Filtered exon 806284 806340 . - . ID=exon:470264;Parent=Transcript:470264 +scaffold_1 JGI_Filtered exon 806368 806829 . - . ID=exon:470264;Parent=Transcript:470264 +scaffold_1 JGI_Filtered CDS 806402 806829 . - 0 ID=CDS:470264;Parent=Transcript:470264;Name=fgenesh2_kg.1__218__AT1G02930.1 +scaffold_1 JGI_Filtered exon 806977 807025 . - . ID=exon:470264;Parent=Transcript:470264 +scaffold_1 JGI_Filtered CDS 806977 807025 . - 2 ID=CDS:470264;Parent=Transcript:470264;Name=fgenesh2_kg.1__218__AT1G02930.1 +scaffold_1 JGI_Filtered exon 807117 807466 . - . ID=exon:470264;Parent=Transcript:470264 +scaffold_1 JGI_Filtered CDS 807117 807266 . - 0 ID=CDS:470264;Parent=Transcript:470264;Name=fgenesh2_kg.1__218__AT1G02930.1 +scaffold_1 JGI_Filtered five_prime_UTR 807267 807466 . - . ID=five_prime_UTR:470264;Parent=Transcript:470264 +scaffold_1 JGI_Filtered gene 808213 809208 . - . ID=fgenesh1_pg.C_scaffold_1000186;Name=fgenesh1_pg.C_scaffold_1000186 +scaffold_1 JGI_Filtered mRNA 808213 809208 . - . ID=Transcript:333621;Name=Transcript:333621;Parent=fgenesh1_pg.C_scaffold_1000186 +scaffold_1 JGI_Filtered exon 808213 808679 . - . ID=exon:333621;Parent=Transcript:333621 +scaffold_1 JGI_Filtered CDS 808213 808679 . - 0 ID=CDS:333621;Parent=Transcript:333621;Name=fgenesh1_pg.C_scaffold_1000186 +scaffold_1 JGI_Filtered exon 808746 808794 . - . ID=exon:333621;Parent=Transcript:333621 +scaffold_1 JGI_Filtered CDS 808746 808794 . - 2 ID=CDS:333621;Parent=Transcript:333621;Name=fgenesh1_pg.C_scaffold_1000186 +scaffold_1 JGI_Filtered exon 808892 809034 . - . ID=exon:333621;Parent=Transcript:333621 +scaffold_1 JGI_Filtered CDS 808892 809034 . - 0 ID=CDS:333621;Parent=Transcript:333621;Name=fgenesh1_pg.C_scaffold_1000186 +scaffold_1 JGI_Filtered exon 809121 809208 . - . ID=exon:333621;Parent=Transcript:333621 +scaffold_1 JGI_Filtered CDS 809121 809208 . - 2 ID=CDS:333621;Parent=Transcript:333621;Name=fgenesh1_pg.C_scaffold_1000186 +scaffold_1 JGI_Filtered gene 810333 811616 . - . ID=fgenesh2_kg.1__222__AT1G02950.2;Name=fgenesh2_kg.1__222__AT1G02950.2 +scaffold_1 JGI_Filtered mRNA 810333 811616 . - . ID=Transcript:470268;Name=Transcript:470268;Parent=fgenesh2_kg.1__222__AT1G02950.2 +scaffold_1 JGI_Filtered three_prime_UTR 810333 810467 . - . ID=three_prime_UTR:470268;Parent=Transcript:470268 +scaffold_1 JGI_Filtered exon 810333 810937 . - . ID=exon:470268;Parent=Transcript:470268 +scaffold_1 JGI_Filtered CDS 810468 810937 . - 0 ID=CDS:470268;Parent=Transcript:470268;Name=fgenesh2_kg.1__222__AT1G02950.2 +scaffold_1 JGI_Filtered exon 811020 811068 . - . ID=exon:470268;Parent=Transcript:470268 +scaffold_1 JGI_Filtered CDS 811020 811068 . - 2 ID=CDS:470268;Parent=Transcript:470268;Name=fgenesh2_kg.1__222__AT1G02950.2 +scaffold_1 JGI_Filtered exon 811269 811417 . - . ID=exon:470268;Parent=Transcript:470268 +scaffold_1 JGI_Filtered CDS 811269 811417 . - 0 ID=CDS:470268;Parent=Transcript:470268;Name=fgenesh2_kg.1__222__AT1G02950.2 +scaffold_1 JGI_Filtered exon 811517 811616 . - . ID=exon:470268;Parent=Transcript:470268 +scaffold_1 JGI_Filtered CDS 811517 811586 . - 2 ID=CDS:470268;Parent=Transcript:470268;Name=fgenesh2_kg.1__222__AT1G02950.2 +scaffold_1 JGI_Filtered five_prime_UTR 811587 811616 . - . ID=five_prime_UTR:470268;Parent=Transcript:470268 +scaffold_1 JGI_Filtered gene 812207 815218 . - . ID=fgenesh2_kg.1__225__AT1G02960.2;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered mRNA 812207 815218 . - . ID=Transcript:470271;Name=Transcript:470271;Parent=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered three_prime_UTR 812207 812274 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 812296 812376 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 812466 812596 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 812720 812811 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 812891 812991 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 813087 813220 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 813309 813434 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 813525 813820 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 813963 814095 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 814231 814353 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered three_prime_UTR 814433 814488 . - . ID=three_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered exon 812207 812274 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered exon 812296 812376 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered exon 812466 812596 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 812466 812596 . - 1 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 812720 812811 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 812720 812811 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 812891 812991 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 812891 812991 . - 2 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 813087 813220 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 813087 813220 . - 1 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 813309 813434 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 813309 813434 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 813525 813820 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 813525 813820 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 813963 814095 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 813963 814095 . - 2 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 814231 814353 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 814231 814353 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 814433 814488 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 814433 814488 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 814575 814614 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 814575 814614 . - 2 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered CDS 814575 812376 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 814872 814930 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 814872 814930 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 815018 815048 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 815018 815048 . - 2 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered exon 815142 815218 . - . ID=exon:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered CDS 815142 815165 . - 0 ID=CDS:470271;Parent=Transcript:470271;Name=fgenesh2_kg.1__225__AT1G02960.2 +scaffold_1 JGI_Filtered five_prime_UTR 815166 815218 . - . ID=five_prime_UTR:470271;Parent=Transcript:470271 +scaffold_1 JGI_Filtered gene 816662 816932 . + . ID=scaffold_100239.1;Name=scaffold_100239.1 +scaffold_1 JGI_Filtered mRNA 816662 816932 . + . ID=Transcript:918958;Name=Transcript:918958;Parent=scaffold_100239.1 +scaffold_1 JGI_Filtered five_prime_UTR 816662 816681 . + . ID=five_prime_UTR:918958;Parent=Transcript:918958 +scaffold_1 JGI_Filtered exon 816662 816932 . + . ID=exon:918958;Parent=Transcript:918958 +scaffold_1 JGI_Filtered CDS 816682 816912 . + 0 ID=CDS:918958;Parent=Transcript:918958;Name=scaffold_100239.1 +scaffold_1 JGI_Filtered three_prime_UTR 816913 816932 . + . ID=three_prime_UTR:918958;Parent=Transcript:918958 +scaffold_1 JGI_Filtered gene 817056 820017 . + . ID=scaffold_100240.1;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered mRNA 817056 820017 . + . ID=Transcript:918959;Name=Transcript:918959;Parent=scaffold_100240.1 +scaffold_1 JGI_Filtered five_prime_UTR 817056 817075 . + . ID=five_prime_UTR:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered exon 817056 817374 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 817076 817374 . + 0 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 817750 817810 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 817750 817810 . + 2 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 817898 817964 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 817898 817964 . + 0 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 818308 818571 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 818308 818571 . + 1 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 818681 818748 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 818681 818748 . + 1 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 818837 818946 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 818837 818946 . + 0 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 819058 819098 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 819058 819098 . + 2 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 819211 819365 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 819211 819365 . + 1 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 819461 819814 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 819461 819814 . + 0 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered exon 819913 820017 . + . ID=exon:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered CDS 819913 819996 . + 0 ID=CDS:918959;Parent=Transcript:918959;Name=scaffold_100240.1 +scaffold_1 JGI_Filtered three_prime_UTR 819997 820017 . + . ID=three_prime_UTR:918959;Parent=Transcript:918959 +scaffold_1 JGI_Filtered gene 822113 822439 . + . ID=scaffold_100241.1;Name=scaffold_100241.1 +scaffold_1 JGI_Filtered mRNA 822113 822439 . + . ID=Transcript:918960;Name=Transcript:918960;Parent=scaffold_100241.1 +scaffold_1 JGI_Filtered five_prime_UTR 822113 822133 . + . ID=five_prime_UTR:918960;Parent=Transcript:918960 +scaffold_1 JGI_Filtered exon 822113 822218 . + . ID=exon:918960;Parent=Transcript:918960 +scaffold_1 JGI_Filtered CDS 822134 822218 . + 0 ID=CDS:918960;Parent=Transcript:918960;Name=scaffold_100241.1 +scaffold_1 JGI_Filtered exon 822307 822439 . + . ID=exon:918960;Parent=Transcript:918960 +scaffold_1 JGI_Filtered CDS 822307 822419 . + 1 ID=CDS:918960;Parent=Transcript:918960;Name=scaffold_100241.1 +scaffold_1 JGI_Filtered three_prime_UTR 822420 822439 . + . ID=three_prime_UTR:918960;Parent=Transcript:918960 +scaffold_1 JGI_Filtered gene 825038 828780 . + . ID=fgenesh1_pm.C_scaffold_1000178;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered mRNA 825038 828780 . + . ID=Transcript:311398;Name=Transcript:311398;Parent=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 825038 825168 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 825038 825168 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 825254 825353 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 825254 825353 . + 2 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 825444 825629 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 825444 825629 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 825712 825759 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 825712 825759 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 825840 826121 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 825840 826121 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 826295 826384 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 826295 826384 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 826473 826553 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 826473 826553 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 826660 826719 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 826660 826719 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 826809 826925 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 826809 826925 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 827003 827155 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 827003 827155 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 827238 827293 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 827238 827293 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 827401 827521 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 827401 827521 . + 2 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 827623 827784 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 827623 827784 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 827859 828002 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 827859 828002 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 828129 828347 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 828129 828347 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 828432 828599 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 828432 828599 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered exon 828679 828780 . + . ID=exon:311398;Parent=Transcript:311398 +scaffold_1 JGI_Filtered CDS 828679 828780 . + 0 ID=CDS:311398;Parent=Transcript:311398;Name=fgenesh1_pm.C_scaffold_1000178 +scaffold_1 JGI_Filtered gene 829172 834582 . - . ID=Al_scaffold_0001_215;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered mRNA 829172 834582 . - . ID=Transcript:909961;Name=Transcript:909961;Parent=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 829172 829369 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 829172 829369 . - 0 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 829739 829899 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 829739 829899 . - 0 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 830295 830455 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 830295 830455 . - 2 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 830738 830898 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 830738 830898 . - 1 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 830982 832366 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 830982 832366 . - 0 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 832453 833554 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 832453 833554 . - 2 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 833645 834013 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 833645 834013 . - 0 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 834095 834195 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 834095 834195 . - 0 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 834264 834336 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 834264 834336 . - 2 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered exon 834430 834582 . - . ID=exon:909961;Parent=Transcript:909961 +scaffold_1 JGI_Filtered CDS 834430 834582 . - 0 ID=CDS:909961;Parent=Transcript:909961;Name=Al_scaffold_0001_215 +scaffold_1 JGI_Filtered gene 835648 840282 . - . ID=fgenesh2_kg.1__231__AT1G03000.1;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered mRNA 835648 840282 . - . ID=Transcript:470277;Name=Transcript:470277;Parent=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered three_prime_UTR 835648 835679 . - . ID=three_prime_UTR:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered three_prime_UTR 835716 835762 . - . ID=three_prime_UTR:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered three_prime_UTR 835781 835786 . - . ID=three_prime_UTR:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered exon 835648 835679 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered exon 835716 835762 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered exon 835781 835876 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 835787 835876 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 835960 836040 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 835960 836040 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 836148 836292 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 836148 836292 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 836376 836647 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 836376 836647 . - 1 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 836734 836856 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 836734 836856 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 836942 837100 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 836942 837100 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 837220 837501 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 837220 837501 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 837671 837859 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 837671 837859 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 838122 838305 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 838122 838305 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 838494 838635 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 838494 838635 . - 1 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 838859 839102 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 838859 839102 . - 2 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 839180 839815 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 839180 839815 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered exon 839963 840282 . - . ID=exon:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered CDS 839963 840259 . - 0 ID=CDS:470277;Parent=Transcript:470277;Name=fgenesh2_kg.1__231__AT1G03000.1 +scaffold_1 JGI_Filtered five_prime_UTR 840260 840282 . - . ID=five_prime_UTR:470277;Parent=Transcript:470277 +scaffold_1 JGI_Filtered gene 841280 844038 . + . ID=fgenesh1_pm.C_scaffold_1000181;Name=fgenesh1_pm.C_scaffold_1000181 +scaffold_1 JGI_Filtered mRNA 841280 844038 . + . ID=Transcript:311401;Name=Transcript:311401;Parent=fgenesh1_pm.C_scaffold_1000181 +scaffold_1 JGI_Filtered exon 841280 841371 . + . ID=exon:311401;Parent=Transcript:311401 +scaffold_1 JGI_Filtered CDS 841280 841371 . + 0 ID=CDS:311401;Parent=Transcript:311401;Name=fgenesh1_pm.C_scaffold_1000181 +scaffold_1 JGI_Filtered exon 841974 842040 . + . ID=exon:311401;Parent=Transcript:311401 +scaffold_1 JGI_Filtered CDS 841974 842040 . + 2 ID=CDS:311401;Parent=Transcript:311401;Name=fgenesh1_pm.C_scaffold_1000181 +scaffold_1 JGI_Filtered exon 842126 843322 . + . ID=exon:311401;Parent=Transcript:311401 +scaffold_1 JGI_Filtered CDS 842126 843322 . + 0 ID=CDS:311401;Parent=Transcript:311401;Name=fgenesh1_pm.C_scaffold_1000181 +scaffold_1 JGI_Filtered exon 843392 843638 . + . ID=exon:311401;Parent=Transcript:311401 +scaffold_1 JGI_Filtered CDS 843392 843638 . + 0 ID=CDS:311401;Parent=Transcript:311401;Name=fgenesh1_pm.C_scaffold_1000181 +scaffold_1 JGI_Filtered exon 843737 844038 . + . ID=exon:311401;Parent=Transcript:311401 +scaffold_1 JGI_Filtered CDS 843737 844038 . + 1 ID=CDS:311401;Parent=Transcript:311401;Name=fgenesh1_pm.C_scaffold_1000181 +scaffold_1 JGI_Filtered gene 845110 845459 . - . ID=scaffold_100246.1;Name=scaffold_100246.1 +scaffold_1 JGI_Filtered mRNA 845110 845459 . - . ID=Transcript:918965;Name=Transcript:918965;Parent=scaffold_100246.1 +scaffold_1 JGI_Filtered three_prime_UTR 845110 845130 . - . ID=three_prime_UTR:918965;Parent=Transcript:918965 +scaffold_1 JGI_Filtered exon 845110 845459 . - . ID=exon:918965;Parent=Transcript:918965 +scaffold_1 JGI_Filtered CDS 845131 845439 . - 0 ID=CDS:918965;Parent=Transcript:918965;Name=scaffold_100246.1 +scaffold_1 JGI_Filtered five_prime_UTR 845440 845459 . - . ID=five_prime_UTR:918965;Parent=Transcript:918965 +scaffold_1 JGI_Filtered gene 849099 851591 . + . ID=fgenesh2_kg.1__234__AT1G03030.1;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered mRNA 849099 851591 . + . ID=Transcript:470280;Name=Transcript:470280;Parent=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered five_prime_UTR 849099 849122 . + . ID=five_prime_UTR:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered exon 849099 849174 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 849123 849174 . + 0 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 849210 849212 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 849210 849212 . + 1 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 849278 849384 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 849278 849384 . + 1 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 849456 849499 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 849456 849499 . + 0 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 849866 849943 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 849866 849943 . + 2 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 850053 850245 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 850053 850245 . + 2 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 850336 850366 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 850336 850366 . + 0 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 850448 850506 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 850448 850506 . + 1 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 850597 850670 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 850597 850670 . + 0 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 850782 850868 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 850782 850868 . + 2 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 850958 851019 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 850958 851019 . + 2 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 851115 851143 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 851115 851143 . + 1 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 851245 851380 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered CDS 851245 851331 . + 0 ID=CDS:470280;Parent=Transcript:470280;Name=fgenesh2_kg.1__234__AT1G03030.1 +scaffold_1 JGI_Filtered exon 851410 851509 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered exon 851562 851591 . + . ID=exon:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered three_prime_UTR 851332 851380 . + . ID=three_prime_UTR:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered three_prime_UTR 851410 851509 . + . ID=three_prime_UTR:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered three_prime_UTR 851562 851591 . + . ID=three_prime_UTR:470280;Parent=Transcript:470280 +scaffold_1 JGI_Filtered gene 851718 854466 . - . ID=fgenesh2_kg.1__235__AT1G03040.1;Name=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered mRNA 851718 854466 . - . ID=Transcript:470281;Name=Transcript:470281;Parent=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered three_prime_UTR 851718 851830 . - . ID=three_prime_UTR:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered three_prime_UTR 851866 851889 . - . ID=three_prime_UTR:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered three_prime_UTR 851917 852058 . - . ID=three_prime_UTR:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered exon 851718 851830 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered exon 851866 851889 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered exon 851917 852274 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered CDS 852059 852274 . - 0 ID=CDS:470281;Parent=Transcript:470281;Name=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered exon 852374 852454 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered CDS 852374 852454 . - 0 ID=CDS:470281;Parent=Transcript:470281;Name=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered exon 852848 852913 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered CDS 852848 852913 . - 0 ID=CDS:470281;Parent=Transcript:470281;Name=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered exon 853085 853150 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered CDS 853085 853150 . - 0 ID=CDS:470281;Parent=Transcript:470281;Name=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered exon 853318 853440 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered CDS 853318 853440 . - 0 ID=CDS:470281;Parent=Transcript:470281;Name=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered exon 853929 854466 . - . ID=exon:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered CDS 853929 854297 . - 0 ID=CDS:470281;Parent=Transcript:470281;Name=fgenesh2_kg.1__235__AT1G03040.1 +scaffold_1 JGI_Filtered five_prime_UTR 854298 854466 . - . ID=five_prime_UTR:470281;Parent=Transcript:470281 +scaffold_1 JGI_Filtered gene 855547 857859 . + . ID=fgenesh2_kg.1__236__AT1G03050.1;Name=fgenesh2_kg.1__236__AT1G03050.1 +scaffold_1 JGI_Filtered mRNA 855547 857859 . + . ID=Transcript:470282;Name=Transcript:470282;Parent=fgenesh2_kg.1__236__AT1G03050.1 +scaffold_1 JGI_Filtered exon 855547 856010 . + . ID=exon:470282;Parent=Transcript:470282 +scaffold_1 JGI_Filtered CDS 855547 856010 . + 0 ID=CDS:470282;Parent=Transcript:470282;Name=fgenesh2_kg.1__236__AT1G03050.1 +scaffold_1 JGI_Filtered exon 856127 856327 . + . ID=exon:470282;Parent=Transcript:470282 +scaffold_1 JGI_Filtered CDS 856127 856327 . + 2 ID=CDS:470282;Parent=Transcript:470282;Name=fgenesh2_kg.1__236__AT1G03050.1 +scaffold_1 JGI_Filtered exon 856419 857290 . + . ID=exon:470282;Parent=Transcript:470282 +scaffold_1 JGI_Filtered CDS 856419 857290 . + 2 ID=CDS:470282;Parent=Transcript:470282;Name=fgenesh2_kg.1__236__AT1G03050.1 +scaffold_1 JGI_Filtered exon 857423 857859 . + . ID=exon:470282;Parent=Transcript:470282 +scaffold_1 JGI_Filtered CDS 857423 857685 . + 1 ID=CDS:470282;Parent=Transcript:470282;Name=fgenesh2_kg.1__236__AT1G03050.1 +scaffold_1 JGI_Filtered three_prime_UTR 857686 857859 . + . ID=three_prime_UTR:470282;Parent=Transcript:470282 +scaffold_1 JGI_Filtered gene 857844 859616 . - . ID=fgenesh2_kg.1__237__AT1G03055.1;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered mRNA 857844 859616 . - . ID=Transcript:470283;Name=Transcript:470283;Parent=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered three_prime_UTR 857844 857928 . - . ID=three_prime_UTR:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered exon 857844 857963 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered CDS 857929 857963 . - 0 ID=CDS:470283;Parent=Transcript:470283;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered exon 858071 858163 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered CDS 858071 858163 . - 2 ID=CDS:470283;Parent=Transcript:470283;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered exon 858487 858593 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered CDS 858487 858593 . - 2 ID=CDS:470283;Parent=Transcript:470283;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered exon 858762 858823 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered CDS 858762 858823 . - 1 ID=CDS:470283;Parent=Transcript:470283;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered exon 858913 859005 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered CDS 858913 859005 . - 0 ID=CDS:470283;Parent=Transcript:470283;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered exon 859082 859227 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered CDS 859082 859227 . - 0 ID=CDS:470283;Parent=Transcript:470283;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered exon 859326 859584 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered CDS 859326 859584 . - 2 ID=CDS:470283;Parent=Transcript:470283;Name=fgenesh2_kg.1__237__AT1G03055.1 +scaffold_1 JGI_Filtered exon 859597 859616 . - . ID=exon:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered five_prime_UTR 859597 859616 . - . ID=five_prime_UTR:470283;Parent=Transcript:470283 +scaffold_1 JGI_Filtered gene 860953 874764 . - . ID=fgenesh1_pm.C_scaffold_1000187;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered mRNA 860953 874764 . - . ID=Transcript:311407;Name=Transcript:311407;Parent=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 860953 862188 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 860953 862188 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 862300 862446 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 862300 862446 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 862541 862847 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 862541 862847 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 863005 863313 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 863005 863313 . - 1 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 863660 866665 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 863660 866665 . - 1 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 866936 868586 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 866936 868586 . - 1 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 868682 869796 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 868682 869796 . - 2 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 869905 870007 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 869905 870007 . - 1 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 870115 870814 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 870115 870814 . - 2 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 870964 872129 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 870964 872129 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 872286 872400 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 872286 872400 . - 2 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 872572 872637 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 872572 872637 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 872780 872971 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 872780 872971 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 873119 873292 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 873119 873292 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 873437 873493 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 873437 873493 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 873574 873709 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 873574 873709 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 873886 873971 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 873886 873971 . - 1 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 874133 874205 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 874133 874205 . - 0 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered exon 874583 874764 . - . ID=exon:311407;Parent=Transcript:311407 +scaffold_1 JGI_Filtered CDS 874583 874764 . - 1 ID=CDS:311407;Parent=Transcript:311407;Name=fgenesh1_pm.C_scaffold_1000187 +scaffold_1 JGI_Filtered gene 878780 880389 . + . ID=fgenesh2_kg.1__240__AT1G03070.1;Name=fgenesh2_kg.1__240__AT1G03070.1 +scaffold_1 JGI_Filtered mRNA 878780 880389 . + . ID=Transcript:470286;Name=Transcript:470286;Parent=fgenesh2_kg.1__240__AT1G03070.1 +scaffold_1 JGI_Filtered five_prime_UTR 878780 878821 . + . ID=five_prime_UTR:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered five_prime_UTR 878841 878855 . + . ID=five_prime_UTR:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered five_prime_UTR 878973 878975 . + . ID=five_prime_UTR:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered exon 878780 878821 . + . ID=exon:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered exon 878841 878855 . + . ID=exon:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered exon 878973 879240 . + . ID=exon:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered CDS 878976 879240 . + 0 ID=CDS:470286;Parent=Transcript:470286;Name=fgenesh2_kg.1__240__AT1G03070.1 +scaffold_1 JGI_Filtered exon 879333 879446 . + . ID=exon:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered CDS 879333 879446 . + 1 ID=CDS:470286;Parent=Transcript:470286;Name=fgenesh2_kg.1__240__AT1G03070.1 +scaffold_1 JGI_Filtered exon 879741 879898 . + . ID=exon:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered CDS 879741 879898 . + 1 ID=CDS:470286;Parent=Transcript:470286;Name=fgenesh2_kg.1__240__AT1G03070.1 +scaffold_1 JGI_Filtered exon 880015 880389 . + . ID=exon:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered CDS 880015 880218 . + 0 ID=CDS:470286;Parent=Transcript:470286;Name=fgenesh2_kg.1__240__AT1G03070.1 +scaffold_1 JGI_Filtered three_prime_UTR 880219 880389 . + . ID=three_prime_UTR:470286;Parent=Transcript:470286 +scaffold_1 JGI_Filtered gene 880540 886200 . - . ID=fgenesh2_kg.1__241__AT1G03080.1;Name=fgenesh2_kg.1__241__AT1G03080.1 +scaffold_1 JGI_Filtered mRNA 880540 886200 . - . ID=Transcript:470287;Name=Transcript:470287;Parent=fgenesh2_kg.1__241__AT1G03080.1 +scaffold_1 JGI_Filtered three_prime_UTR 880540 880629 . - . ID=three_prime_UTR:470287;Parent=Transcript:470287 +scaffold_1 JGI_Filtered exon 880540 881577 . - . ID=exon:470287;Parent=Transcript:470287 +scaffold_1 JGI_Filtered CDS 880630 881577 . - 0 ID=CDS:470287;Parent=Transcript:470287;Name=fgenesh2_kg.1__241__AT1G03080.1 +scaffold_1 JGI_Filtered exon 881766 885928 . - . ID=exon:470287;Parent=Transcript:470287 +scaffold_1 JGI_Filtered CDS 881766 885928 . - 0 ID=CDS:470287;Parent=Transcript:470287;Name=fgenesh2_kg.1__241__AT1G03080.1 +scaffold_1 JGI_Filtered exon 886101 886200 . - . ID=exon:470287;Parent=Transcript:470287 +scaffold_1 JGI_Filtered CDS 886101 886200 . - 2 ID=CDS:470287;Parent=Transcript:470287;Name=fgenesh2_kg.1__241__AT1G03080.1 +scaffold_1 JGI_Filtered gene 890089 894796 . + . ID=fgenesh2_kg.1__243__AT1G03090.2;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered mRNA 890089 894796 . + . ID=Transcript:470289;Name=Transcript:470289;Parent=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered five_prime_UTR 890089 890117 . + . ID=five_prime_UTR:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered exon 890089 890205 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 890118 890205 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 890221 890468 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 890221 890468 . + 1 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 890570 890691 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 890570 890691 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 890792 890939 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 890792 890939 . + 2 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 891150 891287 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 891150 891287 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 891510 891605 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 891510 891605 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 891692 891751 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 891692 891751 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 892060 892152 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 892060 892152 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 892235 892346 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 892235 892346 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 892540 892644 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 892540 892644 . + 1 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 892779 892915 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 892779 892915 . + 1 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 893106 893340 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 893106 893340 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 893424 893584 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 893424 893584 . + 1 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 893721 893834 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 893721 893834 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 893936 894181 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 893936 894181 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 894270 894366 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 894270 894366 . + 0 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 894465 894621 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered CDS 894465 894469 . + 1 ID=CDS:470289;Parent=Transcript:470289;Name=fgenesh2_kg.1__243__AT1G03090.2 +scaffold_1 JGI_Filtered exon 894623 894796 . + . ID=exon:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered three_prime_UTR 894470 894621 . + . ID=three_prime_UTR:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered three_prime_UTR 894623 894796 . + . ID=three_prime_UTR:470289;Parent=Transcript:470289 +scaffold_1 JGI_Filtered gene 897857 898568 . + . ID=fgenesh1_pm.C_scaffold_1000192;Name=fgenesh1_pm.C_scaffold_1000192 +scaffold_1 JGI_Filtered mRNA 897857 898568 . + . ID=Transcript:311412;Name=Transcript:311412;Parent=fgenesh1_pm.C_scaffold_1000192 +scaffold_1 JGI_Filtered exon 897857 898169 . + . ID=exon:311412;Parent=Transcript:311412 +scaffold_1 JGI_Filtered CDS 897857 898169 . + 0 ID=CDS:311412;Parent=Transcript:311412;Name=fgenesh1_pm.C_scaffold_1000192 +scaffold_1 JGI_Filtered exon 898271 898345 . + . ID=exon:311412;Parent=Transcript:311412 +scaffold_1 JGI_Filtered CDS 898271 898345 . + 1 ID=CDS:311412;Parent=Transcript:311412;Name=fgenesh1_pm.C_scaffold_1000192 +scaffold_1 JGI_Filtered exon 898468 898568 . + . ID=exon:311412;Parent=Transcript:311412 +scaffold_1 JGI_Filtered CDS 898468 898568 . + 1 ID=CDS:311412;Parent=Transcript:311412;Name=fgenesh1_pm.C_scaffold_1000192 +scaffold_1 JGI_Filtered gene 899012 901473 . + . ID=scaffold_100257.1;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered mRNA 899012 901473 . + . ID=Transcript:918976;Name=Transcript:918976;Parent=scaffold_100257.1 +scaffold_1 JGI_Filtered five_prime_UTR 899012 899032 . + . ID=five_prime_UTR:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered exon 899012 899169 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 899033 899169 . + 0 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 899439 899603 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 899439 899603 . + 2 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 899775 899955 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 899775 899955 . + 2 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 900074 900130 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 900074 900130 . + 0 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 900214 900284 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 900214 900284 . + 0 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 900444 900522 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 900444 900522 . + 2 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 900605 900664 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 900605 900664 . + 0 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 900778 900881 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 900778 900881 . + 0 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 900957 901017 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 900957 901017 . + 2 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered exon 901088 901473 . + . ID=exon:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered CDS 901088 901453 . + 0 ID=CDS:918976;Parent=Transcript:918976;Name=scaffold_100257.1 +scaffold_1 JGI_Filtered three_prime_UTR 901454 901473 . + . ID=three_prime_UTR:918976;Parent=Transcript:918976 +scaffold_1 JGI_Filtered gene 903002 903965 . + . ID=Al_scaffold_0001_230;Name=Al_scaffold_0001_230 +scaffold_1 JGI_Filtered mRNA 903002 903965 . + . ID=Transcript:909976;Name=Transcript:909976;Parent=Al_scaffold_0001_230 +scaffold_1 JGI_Filtered exon 903002 903313 . + . ID=exon:909976;Parent=Transcript:909976 +scaffold_1 JGI_Filtered CDS 903002 903313 . + 0 ID=CDS:909976;Parent=Transcript:909976;Name=Al_scaffold_0001_230 +scaffold_1 JGI_Filtered exon 903430 903465 . + . ID=exon:909976;Parent=Transcript:909976 +scaffold_1 JGI_Filtered CDS 903430 903465 . + 0 ID=CDS:909976;Parent=Transcript:909976;Name=Al_scaffold_0001_230 +scaffold_1 JGI_Filtered exon 903807 903965 . + . ID=exon:909976;Parent=Transcript:909976 +scaffold_1 JGI_Filtered CDS 903807 903965 . + 0 ID=CDS:909976;Parent=Transcript:909976;Name=Al_scaffold_0001_230 +scaffold_1 JGI_Filtered gene 904253 904913 . - . ID=scaffold_100259.1;Name=scaffold_100259.1 +scaffold_1 JGI_Filtered mRNA 904253 904913 . - . ID=Transcript:918978;Name=Transcript:918978;Parent=scaffold_100259.1 +scaffold_1 JGI_Filtered three_prime_UTR 904253 904272 . - . ID=three_prime_UTR:918978;Parent=Transcript:918978 +scaffold_1 JGI_Filtered exon 904253 904913 . - . ID=exon:918978;Parent=Transcript:918978 +scaffold_1 JGI_Filtered CDS 904273 904890 . - 0 ID=CDS:918978;Parent=Transcript:918978;Name=scaffold_100259.1 +scaffold_1 JGI_Filtered five_prime_UTR 904891 904913 . - . ID=five_prime_UTR:918978;Parent=Transcript:918978 +scaffold_1 JGI_Filtered gene 905189 906974 . - . ID=scaffold_100260.1;Name=scaffold_100260.1 +scaffold_1 JGI_Filtered mRNA 905189 906974 . - . ID=Transcript:918979;Name=Transcript:918979;Parent=scaffold_100260.1 +scaffold_1 JGI_Filtered three_prime_UTR 905189 905209 . - . ID=three_prime_UTR:918979;Parent=Transcript:918979 +scaffold_1 JGI_Filtered exon 905189 905629 . - . ID=exon:918979;Parent=Transcript:918979 +scaffold_1 JGI_Filtered CDS 905210 905629 . - 0 ID=CDS:918979;Parent=Transcript:918979;Name=scaffold_100260.1 +scaffold_1 JGI_Filtered exon 906121 906974 . - . ID=exon:918979;Parent=Transcript:918979 +scaffold_1 JGI_Filtered CDS 906121 906954 . - 0 ID=CDS:918979;Parent=Transcript:918979;Name=scaffold_100260.1 +scaffold_1 JGI_Filtered five_prime_UTR 906955 906974 . - . ID=five_prime_UTR:918979;Parent=Transcript:918979 +scaffold_1 JGI_Filtered gene 907163 909323 . + . ID=scaffold_100261.1;Name=scaffold_100261.1 +scaffold_1 JGI_Filtered mRNA 907163 909323 . + . ID=Transcript:918980;Name=Transcript:918980;Parent=scaffold_100261.1 +scaffold_1 JGI_Filtered five_prime_UTR 907163 907182 . + . ID=five_prime_UTR:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered exon 907163 907260 . + . ID=exon:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered CDS 907183 907260 . + 0 ID=CDS:918980;Parent=Transcript:918980;Name=scaffold_100261.1 +scaffold_1 JGI_Filtered exon 907366 907456 . + . ID=exon:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered CDS 907366 907456 . + 0 ID=CDS:918980;Parent=Transcript:918980;Name=scaffold_100261.1 +scaffold_1 JGI_Filtered exon 908435 908567 . + . ID=exon:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered CDS 908435 908567 . + 1 ID=CDS:918980;Parent=Transcript:918980;Name=scaffold_100261.1 +scaffold_1 JGI_Filtered exon 908809 908878 . + . ID=exon:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered CDS 908809 908878 . + 2 ID=CDS:918980;Parent=Transcript:918980;Name=scaffold_100261.1 +scaffold_1 JGI_Filtered exon 909062 909122 . + . ID=exon:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered CDS 909062 909122 . + 0 ID=CDS:918980;Parent=Transcript:918980;Name=scaffold_100261.1 +scaffold_1 JGI_Filtered exon 909212 909323 . + . ID=exon:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered CDS 909212 909303 . + 1 ID=CDS:918980;Parent=Transcript:918980;Name=scaffold_100261.1 +scaffold_1 JGI_Filtered three_prime_UTR 909304 909323 . + . ID=three_prime_UTR:918980;Parent=Transcript:918980 +scaffold_1 JGI_Filtered gene 912940 913637 . - . ID=fgenesh1_pg.C_scaffold_1000207;Name=fgenesh1_pg.C_scaffold_1000207 +scaffold_1 JGI_Filtered mRNA 912940 913637 . - . ID=Transcript:333642;Name=Transcript:333642;Parent=fgenesh1_pg.C_scaffold_1000207 +scaffold_1 JGI_Filtered exon 912940 913292 . - . ID=exon:333642;Parent=Transcript:333642 +scaffold_1 JGI_Filtered CDS 912940 913292 . - 0 ID=CDS:333642;Parent=Transcript:333642;Name=fgenesh1_pg.C_scaffold_1000207 +scaffold_1 JGI_Filtered exon 913373 913637 . - . ID=exon:333642;Parent=Transcript:333642 +scaffold_1 JGI_Filtered CDS 913373 913637 . - 2 ID=CDS:333642;Parent=Transcript:333642;Name=fgenesh1_pg.C_scaffold_1000207 +scaffold_1 JGI_Filtered gene 915290 920350 . + . ID=fgenesh2_kg.1__249__AT1G03160.1;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered mRNA 915290 920350 . + . ID=Transcript:470295;Name=Transcript:470295;Parent=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered five_prime_UTR 915290 915314 . + . ID=five_prime_UTR:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered exon 915290 915804 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 915315 915804 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 915902 916440 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 915902 916440 . + 1 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 916559 916627 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 916559 916627 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 917198 917395 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 917198 917395 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 917482 917613 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 917482 917613 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 918163 918249 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 918163 918249 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 918340 918780 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 918340 918780 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 918881 919048 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 918881 919048 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 919224 919454 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 919224 919454 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 919678 919793 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 919678 919793 . + 0 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered exon 919950 920350 . + . ID=exon:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered CDS 919950 920250 . + 2 ID=CDS:470295;Parent=Transcript:470295;Name=fgenesh2_kg.1__249__AT1G03160.1 +scaffold_1 JGI_Filtered three_prime_UTR 920251 920350 . + . ID=three_prime_UTR:470295;Parent=Transcript:470295 +scaffold_1 JGI_Filtered gene 923754 924537 . + . ID=scaffold_100263.1;Name=scaffold_100263.1 +scaffold_1 JGI_Filtered mRNA 923754 924537 . + . ID=Transcript:918982;Name=Transcript:918982;Parent=scaffold_100263.1 +scaffold_1 JGI_Filtered five_prime_UTR 923754 923773 . + . ID=five_prime_UTR:918982;Parent=Transcript:918982 +scaffold_1 JGI_Filtered exon 923754 924537 . + . ID=exon:918982;Parent=Transcript:918982 +scaffold_1 JGI_Filtered CDS 923774 924517 . + 0 ID=CDS:918982;Parent=Transcript:918982;Name=scaffold_100263.1 +scaffold_1 JGI_Filtered three_prime_UTR 924518 924537 . + . ID=three_prime_UTR:918982;Parent=Transcript:918982 +scaffold_1 JGI_Filtered gene 928527 930332 . + . ID=fgenesh2_kg.1__251__AT1G03180.1;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered mRNA 928527 930332 . + . ID=Transcript:470297;Name=Transcript:470297;Parent=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered five_prime_UTR 928527 928596 . + . ID=five_prime_UTR:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered five_prime_UTR 928618 928635 . + . ID=five_prime_UTR:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered exon 928527 928596 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered exon 928618 928778 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered CDS 928636 928778 . + 0 ID=CDS:470297;Parent=Transcript:470297;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered exon 929219 929276 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered CDS 929219 929276 . + 2 ID=CDS:470297;Parent=Transcript:470297;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered exon 929356 929664 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered CDS 929356 929664 . + 0 ID=CDS:470297;Parent=Transcript:470297;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered exon 929763 929811 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered CDS 929763 929811 . + 0 ID=CDS:470297;Parent=Transcript:470297;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered exon 929892 929986 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered CDS 929892 929986 . + 1 ID=CDS:470297;Parent=Transcript:470297;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered exon 930065 930144 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered CDS 930065 930144 . + 0 ID=CDS:470297;Parent=Transcript:470297;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered exon 930218 930332 . + . ID=exon:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered CDS 930218 930275 . + 2 ID=CDS:470297;Parent=Transcript:470297;Name=fgenesh2_kg.1__251__AT1G03180.1 +scaffold_1 JGI_Filtered three_prime_UTR 930276 930332 . + . ID=three_prime_UTR:470297;Parent=Transcript:470297 +scaffold_1 JGI_Filtered gene 930603 930956 . + . ID=scaffold_100265.1;Name=scaffold_100265.1 +scaffold_1 JGI_Filtered mRNA 930603 930956 . + . ID=Transcript:918984;Name=Transcript:918984;Parent=scaffold_100265.1 +scaffold_1 JGI_Filtered five_prime_UTR 930603 930626 . + . ID=five_prime_UTR:918984;Parent=Transcript:918984 +scaffold_1 JGI_Filtered exon 930603 930956 . + . ID=exon:918984;Parent=Transcript:918984 +scaffold_1 JGI_Filtered CDS 930627 930935 . + 0 ID=CDS:918984;Parent=Transcript:918984;Name=scaffold_100265.1 +scaffold_1 JGI_Filtered three_prime_UTR 930936 930956 . + . ID=three_prime_UTR:918984;Parent=Transcript:918984 +scaffold_1 JGI_Filtered gene 930976 935010 . + . ID=fgenesh2_kg.1__253__AT1G03190.1;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered mRNA 930976 935010 . + . ID=Transcript:470299;Name=Transcript:470299;Parent=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered five_prime_UTR 930976 930989 . + . ID=five_prime_UTR:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered exon 930976 931523 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 930990 931523 . + 0 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 931664 931944 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 931664 931944 . + 0 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 932247 932329 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 932247 932329 . + 2 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 932436 932839 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 932436 932839 . + 1 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 932973 933166 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 932973 933166 . + 0 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 933254 933434 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 933254 933434 . + 2 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 933586 933710 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 933586 933710 . + 0 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 933879 933968 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 933879 933968 . + 2 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 934075 934153 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 934075 934153 . + 2 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 934248 934324 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 934248 934324 . + 0 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 934525 934631 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 934525 934631 . + 2 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 934730 934886 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered CDS 934730 934851 . + 1 ID=CDS:470299;Parent=Transcript:470299;Name=fgenesh2_kg.1__253__AT1G03190.1 +scaffold_1 JGI_Filtered exon 934900 935010 . + . ID=exon:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered three_prime_UTR 934852 934886 . + . ID=three_prime_UTR:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered three_prime_UTR 934900 935010 . + . ID=three_prime_UTR:470299;Parent=Transcript:470299 +scaffold_1 JGI_Filtered gene 938460 939704 . + . ID=fgenesh1_pm.C_scaffold_1000202;Name=fgenesh1_pm.C_scaffold_1000202 +scaffold_1 JGI_Filtered mRNA 938460 939704 . + . ID=Transcript:311422;Name=Transcript:311422;Parent=fgenesh1_pm.C_scaffold_1000202 +scaffold_1 JGI_Filtered exon 938460 938693 . + . ID=exon:311422;Parent=Transcript:311422 +scaffold_1 JGI_Filtered CDS 938460 938693 . + 0 ID=CDS:311422;Parent=Transcript:311422;Name=fgenesh1_pm.C_scaffold_1000202 +scaffold_1 JGI_Filtered exon 938841 939104 . + . ID=exon:311422;Parent=Transcript:311422 +scaffold_1 JGI_Filtered CDS 938841 939104 . + 0 ID=CDS:311422;Parent=Transcript:311422;Name=fgenesh1_pm.C_scaffold_1000202 +scaffold_1 JGI_Filtered exon 939200 939361 . + . ID=exon:311422;Parent=Transcript:311422 +scaffold_1 JGI_Filtered CDS 939200 939361 . + 0 ID=CDS:311422;Parent=Transcript:311422;Name=fgenesh1_pm.C_scaffold_1000202 +scaffold_1 JGI_Filtered exon 939394 939477 . + . ID=exon:311422;Parent=Transcript:311422 +scaffold_1 JGI_Filtered CDS 939394 939477 . + 0 ID=CDS:311422;Parent=Transcript:311422;Name=fgenesh1_pm.C_scaffold_1000202 +scaffold_1 JGI_Filtered exon 939597 939704 . + . ID=exon:311422;Parent=Transcript:311422 +scaffold_1 JGI_Filtered CDS 939597 939704 . + 0 ID=CDS:311422;Parent=Transcript:311422;Name=fgenesh1_pm.C_scaffold_1000202 +scaffold_1 JGI_Filtered gene 940106 941321 . - . ID=scaffold_100268.1;Name=scaffold_100268.1 +scaffold_1 JGI_Filtered mRNA 940106 941321 . - . ID=Transcript:918987;Name=Transcript:918987;Parent=scaffold_100268.1 +scaffold_1 JGI_Filtered three_prime_UTR 940106 940125 . - . ID=three_prime_UTR:918987;Parent=Transcript:918987 +scaffold_1 JGI_Filtered exon 940106 940528 . - . ID=exon:918987;Parent=Transcript:918987 +scaffold_1 JGI_Filtered CDS 940126 940528 . - 0 ID=CDS:918987;Parent=Transcript:918987;Name=scaffold_100268.1 +scaffold_1 JGI_Filtered exon 940628 940686 . - . ID=exon:918987;Parent=Transcript:918987 +scaffold_1 JGI_Filtered CDS 940628 940686 . - 1 ID=CDS:918987;Parent=Transcript:918987;Name=scaffold_100268.1 +scaffold_1 JGI_Filtered exon 941262 941321 . - . ID=exon:918987;Parent=Transcript:918987 +scaffold_1 JGI_Filtered CDS 941262 941300 . - 0 ID=CDS:918987;Parent=Transcript:918987;Name=scaffold_100268.1 +scaffold_1 JGI_Filtered five_prime_UTR 941301 941321 . - . ID=five_prime_UTR:918987;Parent=Transcript:918987 diff -r 000000000000 -r 79726c328621 fml_gff_groomer/t/Feature_ID_mapping_R.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/t/Feature_ID_mapping_R.txt Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,18 @@ +------------------------------------------------------- +GFFExamine started on Mon Apr 18 13:14:06 2011 +------------------------------------------------------- + +===Report on different level features from GFF file=== + +FIRST level feature(s): + ('JGI_Filtered', 'gene') + +SECOND level feature(s): + ('JGI_Filtered', 'mRNA') + +THIRD level feature(s): + ('JGI_Filtered', 'CDS'), ('JGI_Filtered', 'exon'), ('JGI_Filtered', 'five_prime_UTR'), ('JGI_Filtered', 'three_prime_UTR') + +------------------------------------------------------- +GFFExamine finished at Mon Apr 18 13:14:07 2011 +------------------------------------------------------- diff -r 000000000000 -r 79726c328621 fml_gff_groomer/t/Feature_ID_mapping_W.gff3 --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/t/Feature_ID_mapping_W.gff3 Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,9 @@ +I Coding_transcript gene 2064302 2064690 . + . Alias=Y37E3.3;ID=Gene:WBGene00021347;Name=WBGene00021347 +I Coding_transcript mRNA 2064302 2064690 . + . Alias=WBGene00021347;prediction_status=Confirmed;Note=Y37E3.3;Dbxref=CDS:Y37E3.3;Dbxref=WormPep:WP:CE26662;ID=Transcript:Y37E3.3;Parent=Gene:WBGene00021347;Name=Y37E3.3 +I Coding_transcript five_prime_UTR 2064302 2064306 . + . ID=32606;Parent=Transcript:Y37E3.3;Name=Y37E3.3 +I Coding_transcript CDS 2064307 2064400 . + . ID=32607;Parent=Transcript:Y37E3.3;Name=Y37E3.3 +I Coding_transcript CDS 2064452 2064561 . + 2 ID=32608;Parent=Transcript:Y37E3.3;Name=Y37E3.3 +I Coding_transcript three_prime_UTR 2064562 2064690 . + . ID=32609;Parent=Transcript:Y37E3.3;Name=Y37E3.3 +I Coding_transcript exon 2064302 2064400 . + . ID=71751;Parent=Gene:WBGene00021347 +I Coding_transcript exon 2064452 2064690 . + . ID=71752;Parent=Gene:WBGene00021347 +I Coding_transcript intron 2064401 2064451 . + . confirmed_est=yk498f7.3;ID=71753;Parent=Gene:WBGene00021347 diff -r 000000000000 -r 79726c328621 fml_gff_groomer/t/Feature_ID_mapping_W.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/t/Feature_ID_mapping_W.txt Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,23 @@ +------------------------------------------------------- +GFFExamine started on Mon Apr 18 13:17:17 2011 +------------------------------------------------------- + +===Report on different level features from GFF file=== + +FIRST level feature(s): + ('Coding_transcript', 'gene') + +SECOND level feature(s): + ('Coding_transcript', 'mRNA') + +THIRD level feature(s): + ('Coding_transcript', 'CDS'), ('Coding_transcript', 'five_prime_UTR'), ('Coding_transcript', 'three_prime_UTR') + +GFF Parsing modules from publicly available packages like Bio-python, Bio-perl etc. are heavily dependent on feature identifier mapping. +Here few features seems to be wrongly mapped to its child, which inturn cause problems while extracting the annotation based on feature identifier. + +Error in ID mapping: Level1 feature ('Coding_transcript', 'gene') maps to Level3 feature ('Coding_transcript', 'exon') +Error in ID mapping: Level1 feature ('Coding_transcript', 'gene') maps to Level3 feature ('Coding_transcript', 'intron') +------------------------------------------------------- +GFFExamine finished at Mon Apr 18 13:17:17 2011 +------------------------------------------------------- diff -r 000000000000 -r 79726c328621 fml_gff_groomer/t/GFF_2_Source.gff3 --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/t/GFF_2_Source.gff3 Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,34 @@ +##gff-version 3 +1 gencode gene 11874 14412 . + . ID=Gene:gene:ENSG00000223972;Name=Gene:gene:ENSG00000223972 +1 gencode mRNA 11874 14412 . + . ID=Transcript:gene:ENSG00000223972.1;Parent=Gene:gene:ENSG00000223972;prediction_status=Predicted +1 gencode five_prime_UTR 11874 12227 . + . ID=five_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode five_prime_UTR 12613 12721 . + . ID=five_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode five_prime_UTR 13221 14158 . + . ID=five_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode CDS 14159 14389 . + 0 ID=CDS:gene:ENSG00000223972.1;Name=CDS:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode three_prime_UTR 14390 14412 . + . ID=three_prime_UTR:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode exon 11874 12227 . + . ID=exon:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode exon 12613 12721 . + . ID=exon:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode exon 13221 14412 . + . ID=exon:gene:ENSG00000223972.1;Parent=Transcript:gene:ENSG00000223972.1 +1 gencode mRNA 12010 13670 . + . ID=Transcript:gene:ENSG00000223972.2;Parent=Gene:gene:ENSG00000223972;prediction_status=Predicted +1 gencode exon 12010 12057 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2 +1 gencode exon 12179 12227 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2 +1 gencode exon 12613 12697 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2 +1 gencode exon 12975 13052 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2 +1 gencode exon 13221 13374 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2 +1 gencode exon 13453 13670 . + . ID=exon:gene:ENSG00000223972.2;Parent=Transcript:gene:ENSG00000223972.2 +scaffold_1 JGI_Filtered gene 47 2523 . - . ID=scaffold_100001.1;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered mRNA 47 2523 . - . ID=Transcript:918720;Name=Transcript:918720;Parent=scaffold_100001.1 +scaffold_1 JGI_Filtered three_prime_UTR 47 66 . - . ID=three_prime_UTR:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered exon 47 252 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 67 252 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 407 782 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 407 782 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 1423 1642 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 1423 1642 . - 1 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 1803 2035 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 1803 2035 . - 2 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 2124 2347 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 2124 2347 . - 1 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered exon 2444 2523 . - . ID=exon:918720;Parent=Transcript:918720 +scaffold_1 JGI_Filtered CDS 2444 2503 . - 0 ID=CDS:918720;Parent=Transcript:918720;Name=scaffold_100001.1 +scaffold_1 JGI_Filtered five_prime_UTR 2504 2523 . - . ID=five_prime_UTR:918720;Parent=Transcript:918720 diff -r 000000000000 -r 79726c328621 fml_gff_groomer/t/GFF_2_Source_FeatureScan.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fml_gff_groomer/t/GFF_2_Source_FeatureScan.txt Tue Jun 07 17:29:24 2011 -0400 @@ -0,0 +1,39 @@ +------------------------------------------------------- +FeatureScan started on Mon Apr 18 13:39:10 2011 +------------------------------------------------------- + +==Overview of available source(s) and feature type(s) from GFF file== + +Chromosome identifier(s) and corresponding count: + 1 17 + scaffold_1 16 + +Source(s) of feature and corresponding count: + JGI_Filtered 16 + gencode 17 + +Feature type(s) and corresponding count: + 7 CDS + 15 exon + 4 five_prime_UTR + 2 gene + 3 mRNA + 2 three_prime_UTR + +Unique combination of Feature type(s), Source(s) and corresponding count: + 6 JGI_Filtered, CDS + 6 JGI_Filtered, exon + 1 JGI_Filtered, five_prime_UTR + 1 JGI_Filtered, gene + 1 JGI_Filtered, mRNA + 1 JGI_Filtered, three_prime_UTR + 1 gencode, CDS + 9 gencode, exon + 3 gencode, five_prime_UTR + 1 gencode, gene + 2 gencode, mRNA + 1 gencode, three_prime_UTR + +------------------------------------------------------- +FeatureScan finished at Mon Apr 18 13:39:10 2011 +-------------------------------------------------------