Mercurial > repos > vlefort > package_phyml_3_1

annotate tool_dependencies.xml @ 0:7f68b38e2be1 draft default tip

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Imported from capsule None
author vlefort
date Wed, 13 Apr 2016 10:29:31 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="phyml" version="3.1">
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4 <install version="1.0">
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5 <actions_group>
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6 <actions os="darwin" architecture="x86_64">
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7 <action type="download_by_url">http://www.atgc-montpellier.fr/download/binaries/phyml/PhyML-3.1.zip</action>
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8 <action type="move_directory_files">
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9 <source_directory>.</source_directory>
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10 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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11 </action>
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12 <action type="chmod">
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13 <file mode="755">$INSTALL_DIR/bin/PhyML-3.1_macOS-MountainLion</file>
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14 </action>
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15 <action type="shell_command">ln -s $INSTALL_DIR/bin/PhyML-3.1_macOS-MountainLion $INSTALL_DIR/bin/phyml</action>
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16 </actions>
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17 <actions os="linux" architecture="i386">
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18 <action type="download_by_url">http://www.atgc-montpellier.fr/download/binaries/phyml/PhyML-3.1.zip</action>
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19 <action type="move_directory_files">
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20 <source_directory>.</source_directory>
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21 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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22 </action>
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23 <action type="chmod">
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24 <file mode="755">$INSTALL_DIR/bin/PhyML-3.1_linux32</file>
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25 </action>
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26 <action type="shell_command">ln -s $INSTALL_DIR/bin/PhyML-3.1_linux32 $INSTALL_DIR/bin/phyml</action>
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27 </actions>
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28 <actions os="linux" architecture="x86_64">
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29 <action type="download_by_url">http://www.atgc-montpellier.fr/download/binaries/phyml/PhyML-3.1.zip</action>
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30 <action type="move_directory_files">
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31 <source_directory>.</source_directory>
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32 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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33 </action>
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34 <action type="chmod">
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35 <file mode="755">$INSTALL_DIR/bin/PhyML-3.1_linux64</file>
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36 </action>
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37 <action type="shell_command">ln -s $INSTALL_DIR/bin/PhyML-3.1_linux64 $INSTALL_DIR/bin/phyml</action>
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38 </actions>
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39 <action type="set_environment">
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40 <environment_variable name="PHYML_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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41 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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42 </action>
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43 </actions_group>
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44 </install>
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45 </package>
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46 </tool_dependency>