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comparison vcf_filter.xml @ 1:a548b3c6ed00

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corrected upload
author wolma
date Wed, 11 Feb 2015 08:57:11 -0500
parents 6231ae8f87b8
children 72d20758ba2c
comparison
equal deleted inserted replaced
0:6231ae8f87b8 1:a548b3c6ed00
1 <tool id="vcf_filter" name="VCF Filter"> 1 <tool id="vcf_filter" name="VCF Filter">
2 <description>Extracts lines from a vcf variant file based on field-specific filters</description> 2 <description>Extracts lines from a vcf variant file based on field-specific filters</description>
3 <requirements>
4 <requirement type="package">mimodd</requirement>
5 </requirements>
3 <version_command>mimodd version -q</version_command> 6 <version_command>mimodd version -q</version_command>
4 <command> 7 <command>
5 mimodd vcf-filter 8 mimodd vcf-filter
6 "$inputfile" 9 "$inputfile"
7 -o "$outputfile" 10 -o "$outputfile"