Mercurial > repos > wolma > mimodd

diff tool_dependencies.xml @ 22:24154c580718 draft

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Uploaded
author wolma
date Sun, 12 Jun 2016 07:39:46 -0400
parents c46406466625
children 5db0545b9004
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--- a/tool_dependencies.xml	Sat Jun 11 19:10:44 2016 -0400
+++ b/tool_dependencies.xml	Sun Jun 12 07:39:46 2016 -0400
@@ -77,6 +77,9 @@
         
       <!-- configure environment -->
         <action type="set_environment">
+          <!-- since the iuc R package does not export the path to R's libR.so,
+               any venv using rpy2, needs to record this path -->
+          <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[R_HOME]/lib</environment_variable>
           <!-- to make MiModD accessible it is sufficient to simply add the 
                venvs site-packages directory to PYTHONPATH; 
                SITE_PACKAGES_RELPATH will be made available by the python3