Mercurial > repos > wolma > mimodd
diff tool_dependencies.xml @ 17:b658c34ee3fd draft
Uploaded
| author | wolma |
|---|---|
| date | Tue, 26 Apr 2016 07:03:26 -0400 |
| parents | e676aa6997cc |
| children | 2742ad4d1608 |
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--- a/tool_dependencies.xml Mon Apr 25 18:00:02 2016 -0400 +++ b/tool_dependencies.xml Tue Apr 26 07:03:26 2016 -0400 @@ -29,9 +29,9 @@ <action type="shell_command">. $INSTALL_DIR/MiModD_venv/bin/activate</action> <!-- download and install rpy2 --> - <action sha256sum="0d88f7fff21fbef523c8678ed8f850a36052edca4ce702c62f234fdcb52de441" type="download_by_url"> - https://depot.galaxyproject.org/software/rpy2/rpy2_2.7.5_src_all.tar.gz - </action> + <action type="download_file" sha256sum="beb3445cfc3a0f9a36df7de6489d2a488a5ac113c471c448e46e6d9c47cb7840">https://depot.galaxyproject.org/software/rpy2/rpy2_2.7.5_src_all.tar.gz</action> + <action type="shell_command">tar -xzf rpy2_2.7.5_src_all.tar.gz</action> + <action type="change_directory">rpy2-2.7.5</action> <action type="set_environment_for_install"> <repository changeset_revision="ca1a9400d4e1" name="package_readline_6_3" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="readline" version="6.3" /> @@ -48,7 +48,9 @@ <action type="change_directory">$TMP_WORK_DIR</action> <!-- download and install MiModD --> - <action type="download_by_url">http://sourceforge.net/projects/mimodd/files/MiModD-0.1.7.2.tar.gz</action> + <action type="download_file">http://sourceforge.net/projects/mimodd/files/MiModD-0.1.7.2.tar.gz</action> + <action type="shell_command">tar -xzf MiModD-0.1.7.2.tar.gz</action> + <action type="change_directory">MiModD-0.1.7.2</action> <action type="set_environment_for_install"> <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="zlib" version="1.2.8" />