diff bamsort.xml @ 21:c46406466625 draft

Uploaded
author wolma
date Sat, 11 Jun 2016 19:10:44 -0400
parents 93db2f9bca12
children 5db0545b9004
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--- a/bamsort.xml	Fri Apr 29 06:01:46 2016 -0400
+++ b/bamsort.xml	Sat Jun 11 19:10:44 2016 -0400
@@ -4,9 +4,9 @@
     <import>toolshed_macros.xml</import>
   </macros>
   <expand macro="requirements"/>
-  <version_command>mimodd version -q</version_command>
+  <version_command>python3 -m MiModD version -q</version_command>
   <command>
-	mimodd sort "$input.ifile" -o "$output" --iformat $input.iformat --oformat $oformat $by_name
+	python3 -m MiModD sort "$input.ifile" -o "$output" --iformat $input.iformat --oformat $oformat $by_name
   </command>
   
   <inputs>