Mercurial > repos > wolma > mimodd
view snpeff_genomes.xml @ 10:ac3eac581b83
fix download link to point to latest version
author | Wolfgang Maier wolfgang.maier@biologie.uni-freiburg.de |
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date | Thu, 28 Jan 2016 17:41:02 +0100 |
parents | 93db2f9bca12 |
children | c46406466625 |
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<tool id="snpeff_genomes" name="List Installed SnpEff Genomes" version="0.1.7.2"> <description>Checks the local SnpEff installation to compile a list of currently installed genomes</description> <macros> <import>toolshed_macros.xml</import> </macros> <expand macro="requirements"/> <version_command>mimodd version -q</version_command> <command> mimodd snpeff-genomes -o "$outputfile" </command> <outputs> <data name="outputfile" format="tabular" /> </outputs> <help> .. class:: infomark **What it does** When executed this tool searches the host machine's SnpEff installation for properly registered and installed genome annotation files. The resulting list is added as a plain text file to your history for use with the *Variant Annotation* Tool. </help> </tool>