comparison isoplot.xml @ 1:dd3e046a72ad draft default tip

"planemo upload for repository https://github.com/llegregam/Isoplot/tree/main commit 97521f53202a392709ba96988129ae08d0dac317"

0:8b54f922377a

<tool id='isoplot' name='Isoplot: Generate plots from isocor output' version='1.3.0+galaxy0' profile='20.01'>
    <requirements>
        <requirement type='package' version='1.3.0'>isoplot</requirement>
    </requirements>
    <command><![CDATA[
         isoplot '$datafile' 'galaxy' '$format' --value '$value' --template '$template_file' $SP.barplot $SP.meaned_barplot 

    -a
#end if
-g -z '$plots_output' > $data_output 2> '$log_output'
    ]]></command>
    <inputs>
        <param name='datafile' type='data' format='csv, tabular' multiple='true' label='Upload data that has been corrected by Isocor (.tsv format)' />
        <param name='template_file' type='data' format='csv, xlsx' multiple='true' label='Upload template file containing plot metadata (.xlsx format)' argument='--template'/>
        <!--param name='run_name' type='text' label='Run name' /-->
        <param name='format' type='select' label='Plot format'>
            <option value='pdf'>pdf</option>
            <option value='jpeg'>jpeg</option>
            <option value='png'>png</option>

1:dd3e046a72ad

<tool id='isoplot' name='Isoplot: Generate plots from isocor output' version='1.3.0+galaxy1' profile='20.01'>
    <requirements>
        <requirement type='package' version='1.3.0'>isoplot</requirement>
    </requirements>
    <command><![CDATA[
         isoplot '$datafile' 'galaxy' '$format' --value '$value' --template '$template_file' $SP.barplot $SP.meaned_barplot 

    -a
#end if
-g -z '$plots_output' > $data_output 2> '$log_output'
    ]]></command>
    <inputs>
        <param name='datafile' type='data' format='csv,tabular' multiple='true' label='Upload data that has been corrected by Isocor (.tsv format)' />
        <param name='template_file' type='data' format='csv,xlsx' multiple='true' label='Upload template file containing plot metadata (.xlsx format)' argument='--template'/>
        <!--param name='run_name' type='text' label='Run name' /-->
        <param name='format' type='select' label='Plot format'>
            <option value='pdf'>pdf</option>
            <option value='jpeg'>jpeg</option>
            <option value='png'>png</option>