Mercurial > repos > workflow4metabolomics > xcms_plot_eic
comparison macros_xcms_plot.xml @ 1:cbedca3ba6e1 draft default tip
planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/ commit bb7574b871cff739f7abbda62a5269ec1f98971f
author | workflow4metabolomics |
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date | Thu, 15 May 2025 17:02:59 +0000 |
parents | 51015f22fcb7 |
children |
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0:51015f22fcb7 | 1:cbedca3ba6e1 |
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1 <macros> | 1 <macros> |
2 <token name="@TOOL_VERSION@">4.0.0</token> | 2 <token name="@TOOL_VERSION@">4.4.0</token> |
3 <xml name="creator"> | 3 <xml name="creator"> |
4 <creator> | 4 <creator> |
5 <person | 5 <person |
6 givenName="Wudmir" | 6 givenName="Wudmir" |
7 familyName="Rojas" | 7 familyName="Rojas" |
22 <xrefs> | 22 <xrefs> |
23 <xref type="bio.tools">XCMS</xref> | 23 <xref type="bio.tools">XCMS</xref> |
24 </xrefs> | 24 </xrefs> |
25 </xml> | 25 </xml> |
26 <xml name="base_params"> | 26 <xml name="base_params"> |
27 <param type="data" name="input" format="mzML" label="Input mzML file"/> | 27 <param type="data" name="input" format="mzml" label="Input mzML file"/> |
28 <param type="float" name="mz_value" value="10.0" min="0.0" label="m/z Value" help="m/z value for the EIC"/> | 28 <param type="float" name="mz_value" value="10.0" min="0.0" label="m/z Value" help="m/z value for the EIC"/> |
29 <param type="integer" value="10" name="tolerance_ppm" min="0" label="Tolerance (ppm)" help="Tolerance for m/z value in ppm"/> | 29 <param type="integer" value="10" name="tolerance_ppm" min="0" label="Tolerance (ppm)" help="Tolerance for m/z value in ppm. Tolerance is applied on both sides (+-)."/> |
30 <param type="integer" value="1" name="mslevel" min="1" label="MS Level" help="MS level for the EIC"/> | |
30 </xml> | 31 </xml> |
31 <xml name="citations"> | 32 <xml name="citations"> |
32 <citations> | 33 <citations> |
33 <citation type="doi">10.1021/ac051437y</citation> | 34 <citation type="doi">10.1021/ac051437y</citation> |
34 <citation type="doi">10.3390/metabo12020173</citation> | 35 <citation type="doi">10.3390/metabo12020173</citation> |