Mercurial > repos > workflow4metabolomics > xcms_refine
diff abims_xcms_refine.xml @ 1:20f8ebc3a391 draft default tip
planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/ commit 2cb157bd9a8701a3d6874e084032cbd050b8953e
| author | workflow4metabolomics |
|---|---|
| date | Mon, 11 Sep 2023 09:19:47 +0000 |
| parents | eb115eb8f25c |
| children |
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--- a/abims_xcms_refine.xml Thu Jun 17 07:42:55 2021 +0000 +++ b/abims_xcms_refine.xml Mon Sep 11 09:19:47 2023 +0000 @@ -1,4 +1,4 @@ -<tool id="abims_xcms_refine" name="xcms refineChromPeaks (refine)" version="3.12.0+galaxy0"> +<tool id="abims_xcms_refine" name="xcms refineChromPeaks (refine)" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description>Remove or merge chromatographic peaks based on specific criteria.</description> @@ -77,7 +77,7 @@ test 1 - MergeNeighboringPeaks method --> <test> - <param name="image" value="faahKO-single.xset.merged.RData" ftype="rdata"/> + <param name="image" value="faahKO-single-class.xset.merged.group.RData" ftype="rdata"/> <conditional name="methods"> <param name="method" value="MergeNeighboringPeaks"/> <param name="expandRt" value="2" /> @@ -104,7 +104,7 @@ test 2 - FilterIntensity method --> <test> - <param name="image" value="faahKO-single.xset.merged.RData" ftype="rdata"/> + <param name="image" value="faahKO-single-class.xset.merged.group.RData" ftype="rdata"/> <conditional name="methods"> <param name="method" value="FilterIntensity"/> <param name="threshold" value="1e5" /> @@ -126,7 +126,7 @@ test 3 - CleanPeaks method --> <test> - <param name="image" value="faahKO-single.xset.merged.RData" ftype="rdata"/> + <param name="image" value="faahKO-single-class.xset.merged.group.RData" ftype="rdata"/> <conditional name="methods"> <param name="method" value="CleanPeaks"/> <param name="maxPeakwidth" value="8" /> @@ -244,7 +244,7 @@ Changelog/News -------------- -.. _News: https://bioconductor.org/packages/release/bioc/news/xcms/NEWS +.. _news: https://bioconductor.org/packages/release/bioc/news/xcms/NEWS **Version 3.6.1.0 - 08/02/2021**