Mercurial > repos > xuebing > sharplabtool
view tools/visualization/GMAJ.py @ 0:9071e359b9a3
Uploaded
author | xuebing |
---|---|
date | Fri, 09 Mar 2012 19:37:19 -0500 |
parents | |
children |
line wrap: on
line source
#!/usr/bin/env python """ Script that Creates a zip file for use by GMAJ """ import sys, zipfile def __main__(): #create a new zip file out_file = zipfile.ZipFile( sys.argv[1], "w" ) #add info files out_file.write( sys.argv[3], "input.gmaj" ) #THIS FILE MUST BE ADDED FIRST out_file.write( sys.argv[2], "input.maf" ) #add annotation files for line in open( sys.argv[4] ): try: out_file.write( *[ field.strip() for field in line.split( "=", 1 ) ] ) except: continue out_file.close() if __name__ == "__main__": __main__()