view tools/data_source/genbank.xml @ 1:cdcb0ce84a1b

Uploaded

<tool id="genbank" name="Connect to Genbank">
<!--  <description>queries genbank</description> -->
  <command interpreter="python">genbank.py $mode "$text" $output</command>
  <inputs>
    <param name="mode" type="select">
      <option value="nucleotide">nucleotide database</option>
      <option value="protein">proteins database</option>
      <label>Get sequences from the</label>
    </param>
    <param name="text" size="40" type="text" value="6273291">
      <label>with accession ID</label>
    </param>   
  </inputs>
  <outputs>
    <data format="fasta" name="output" />
  </outputs>
  <help>
At the moment this tool allows the following simple searches:

- by GI: **51594135**
- by accession: **CF622840**
- using text: **human hbb1** (this feature is experimental)
  </help>

</tool>