view tools/mytools/metaintv_ext.xml @ 1:cdcb0ce84a1b

author xuebing
date Fri, 09 Mar 2012 19:45:15 -0500
parents 9071e359b9a3
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<tool id="metaintv_ext" name="aggregrate binned-average">
  <description>from bigwig (allow extension)</description>
  <command interpreter="python"> $bwfile $intvfile $exts $nbins $outfile $outplot > $outlog </command>
      <param name="intvfile" format="interval" type="data" label="Interval file"/>
      <param name="bwfile" format="bigwig" type="data" label="BigWig file"/> 
      <param name="exts" type="text" size="80" value="100,50,50,100" label="extensions"/>
      <param name="nbins" type="text" size="80" value="10,10,10" label="number of bins"/>
      <data format="txt" name="outlog" label="${} on ${on_string}[log]"/>
    <data format="tabular" name="outfile" label="${} on ${on_string}[data]"/>
        <data format="pdf" name="outplot" label="${} on ${on_string}[plot]"/>

.. class:: infomark

To be added