Mercurial > repos > yating-l > gbtofasta
comparison gbToFasta.xml @ 1:b673449d111a draft default tip
planemo upload commit f3fb68f4faf6766eef195b8b36157035ab95e7b1-dirty
| author | yating-l |
|---|---|
| date | Mon, 05 Jun 2017 12:50:14 -0400 |
| parents | 9573618e2afe |
| children |
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| 0:9573618e2afe | 1:b673449d111a |
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| 13 '${gbfile}' | 13 '${gbfile}' |
| 14 #if $cds == "yes" | 14 #if $cds == "yes" |
| 15 && raToTab | 15 && raToTab |
| 16 -cols=acc,cds | 16 -cols=acc,cds |
| 17 outputra | 17 outputra |
| 18 '${outputcds}' | 18 cds_file |
| 19 && python $__tool_directory__/filter.py -f cds_file -o '${outputcds}' | |
| 19 #end if | 20 #end if |
| 20 ]]></command> | 21 ]]></command> |
| 21 <inputs> | 22 <inputs> |
| 22 <param type="data" name="gbfile" format="genbank" /> | 23 <param type="data" name="gbfile" format="genbank" /> |
| 23 <param type="select" name="cds" label="Create table with coding regions information for each mRNA record" > | 24 <param type="select" name="cds" label="Create table with coding regions information for each mRNA record" > |