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planemo upload for repository https://github.com/Yating-L/suite_gonramp_apollo.git commit 5367a00befb467f162d1870edb91f9face72e894
author yating-l
date Fri, 16 Feb 2018 10:57:13 -0500
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1 G-OnRamp Apollo Tools
2 =====================
3
4 A suite of Galaxy tools for managing a local Apollo server. It includes following tools:
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6 JBrowseHub to Apollo
7 --------------------
8
9 This Galaxy tool is used to create or overwrite an organism on an Apollo server with a jbrowse hub created by JBrowse Archive Creator.
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11 Apollo User Manager
12 -------------------
13
14 This Galaxy tool is used to manage Apollo users. The currently supported operation including:
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16 - Create a new user
17 - Delete a user
18 - Add a user to a group (If the group doesn't exist, create the group)
19 - Remove a user to a group
20
21 The tool can do these operations on one student at a time. It can also do the operations on multiple students at a time by uploading a text file, which including students information.
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23 The text file can be either CSV (comma-delimited) or Tabular (tab-delimited). It should have a header line, including names for each column. Example text files:
24
25 Text file for creating multiple users:
26
27 .. csv-table::
28 :header: "useremail", "firstname", "lastname", "password"
29 :widths: 20, 10, 10, 10
30
31 "test1@demo.com", "test1", "demo", "1234"
32 "test2@demo.com", "test2", "demo", "1234"
33 "test3@demo.com", "test3", "demo", "1234"
34
35
36 Text file for deleting multiple users:
37
38 .. csv-table::
39 :header: "useremail"
40 :widths: 20
41
42 "test1@demo.com"
43 "test2@demo.com"
44 "test3@demo.com"
45
46 Text file for adding multiple users to a group:
47
48 .. csv-table::
49 :header: "useremail", "group"
50 :widths: 20, 20
51
52 "test1@demo.com", "Test group"
53 "test2@demo.com", "Test group"
54 "test3@demo.com", "Test group"
55
56 Text file for removing multiple users to a group:
57
58 .. csv-table::
59 :header: "useremail", "group"
60 :widths: 20, 20
61
62 "test1@demo.com", "Test group"
63 "test2@demo.com", "Test group"
64 "test3@demo.com", "Test group"