Mercurial > repos > yating-l > gonramp_apollo_tools
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planemo upload for repository https://github.com/Yating-L/suite_gonramp_apollo.git commit 5367a00befb467f162d1870edb91f9face72e894
| author | yating-l |
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| date | Fri, 16 Feb 2018 10:57:13 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Fri Feb 16 10:57:13 2018 -0500 @@ -0,0 +1,64 @@ +G-OnRamp Apollo Tools +===================== + +A suite of Galaxy tools for managing a local Apollo server. It includes following tools: + +JBrowseHub to Apollo +-------------------- + +This Galaxy tool is used to create or overwrite an organism on an Apollo server with a jbrowse hub created by JBrowse Archive Creator. + +Apollo User Manager +------------------- + +This Galaxy tool is used to manage Apollo users. The currently supported operation including: + + - Create a new user + - Delete a user + - Add a user to a group (If the group doesn't exist, create the group) + - Remove a user to a group + +The tool can do these operations on one student at a time. It can also do the operations on multiple students at a time by uploading a text file, which including students information. + +The text file can be either CSV (comma-delimited) or Tabular (tab-delimited). It should have a header line, including names for each column. Example text files: + +Text file for creating multiple users: + +.. csv-table:: + :header: "useremail", "firstname", "lastname", "password" + :widths: 20, 10, 10, 10 + + "test1@demo.com", "test1", "demo", "1234" + "test2@demo.com", "test2", "demo", "1234" + "test3@demo.com", "test3", "demo", "1234" + + +Text file for deleting multiple users: + +.. csv-table:: + :header: "useremail" + :widths: 20 + + "test1@demo.com" + "test2@demo.com" + "test3@demo.com" + +Text file for adding multiple users to a group: + +.. csv-table:: + :header: "useremail", "group" + :widths: 20, 20 + + "test1@demo.com", "Test group" + "test2@demo.com", "Test group" + "test3@demo.com", "Test group" + +Text file for removing multiple users to a group: + +.. csv-table:: + :header: "useremail", "group" + :widths: 20, 20 + + "test1@demo.com", "Test group" + "test2@demo.com", "Test group" + "test3@demo.com", "Test group"